RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 IGHV3OR16-10A0A075B7F0 116 aa3.96□□□□□ -1.77
EDEM3-203ENST00000439962 IGHV4-61A0A0C4DH41 118 aa3.96□□□□□ -1.77
EDEM3-203ENST00000439962 IFNL4K9M1U5 179 aa3.96□□□□□ -1.77
EDEM3-203ENST00000439962 PLATP00750 562 aa3.96□□□□□ -1.77
EDEM3-203ENST00000439962 MT-ND4LP03901 98 aa3.96□□□□□ -1.77
EDEM3-203ENST00000439962 TFF1P04155 84 aa3.96□□□□□ -1.77
EDEM3-203ENST00000439962 HSPB1P04792 205 aaKnown RBP3.96□□□□□ -1.77
EDEM3-203ENST00000439962 CAMLGP49069 296 aa3.96□□□□□ -1.77
EDEM3-203ENST00000439962 SERF2P84101 59 aa3.96□□□□□ -1.77
EDEM3-203ENST00000439962 GUK1Q16774 197 aa3.96□□□□□ -1.77
EDEM3-203ENST00000439962 ATP6V1FQ16864 119 aa3.96□□□□□ -1.77
EDEM3-203ENST00000439962 TMEM30BQ3MIR4 351 aa3.96□□□□□ -1.77
EDEM3-203ENST00000439962 Q6P435 159 aa3.96□□□□□ -1.77
EDEM3-203ENST00000439962 ATRAIDQ6UW56 229 aa3.96□□□□□ -1.77
EDEM3-203ENST00000439962 ZNF497Q6ZNH5 498 aa3.96□□□□□ -1.77
EDEM3-203ENST00000439962 SUMF2Q8NBJ7 301 aa3.96□□□□□ -1.77
EDEM3-203ENST00000439962 OR10J5Q8NHC4 309 aa3.96□□□□□ -1.77
EDEM3-203ENST00000439962 MAFIPQ8WZ33 124 aa3.96□□□□□ -1.77
EDEM3-203ENST00000439962 DUX5Q96PT3 197 aa3.96□□□□□ -1.77
EDEM3-203ENST00000439962 TP53RKQ96S44 253 aa3.96□□□□□ -1.77
EDEM3-203ENST00000439962 ATP5SQ99766 215 aa3.96□□□□□ -1.77
EDEM3-203ENST00000439962 USB1Q9BQ65 265 aaKnown RBP3.96□□□□□ -1.77
EDEM3-203ENST00000439962 TCEAL7Q9BRU2 100 aa3.96□□□□□ -1.77
EDEM3-203ENST00000439962 TMEM204Q9BSN7 226 aa3.96□□□□□ -1.77
EDEM3-203ENST00000439962 RAB1BQ9H0U4 201 aa3.96□□□□□ -1.77
EDEM3-203ENST00000439962 SLC35B3Q9H1N7 401 aa3.96□□□□□ -1.77
EDEM3-203ENST00000439962 SAP30LQ9HAJ7 183 aa3.96□□□□□ -1.77
EDEM3-203ENST00000439962 RAB9BQ9NP90 201 aa3.96□□□□□ -1.77
EDEM3-203ENST00000439962 A6NLC8 198 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 VSTM5A8MXK1 200 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 GRPP07492 148 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 PGA5P0DJD9 388 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 ZNF16P17020 682 aaPredicted RBP3.96□□□□□ -1.78
EDEM3-203ENST00000439962 CA6P23280 308 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 RAB5BP61020 215 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 PSG7Q13046 419 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 TESK1Q15569 626 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 SLC35E4Q6ICL7 350 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 Q6ZPA2 131 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 SSX8Q7RTT4 187 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 CENPVQ7Z7K6 275 aaPredicted RBP3.96□□□□□ -1.78
EDEM3-203ENST00000439962 STX12Q86Y82 276 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 TMEM252Q8N6L7 170 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 OR10V1Q8NGI7 309 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 OR2G3Q8NGZ4 309 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 TAF15Q92804 592 aaKnown RBP eCLIP3.96□□□□□ -1.78
EDEM3-203ENST00000439962 PINX1Q96BK5 328 aaKnown RBP3.96□□□□□ -1.78
EDEM3-203ENST00000439962 P2RX4Q99571 388 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 SSX3Q99909 188 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 HRH4Q9H3N8 390 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 OR2S2Q9NQN1 319 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 SIRT7Q9NRC8 400 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 TNFRSF19Q9NS68 423 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 FAM74A7A6NL05 159 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 B9A039 149 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 ITGB1BP1O14713 200 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 SH2D1BO14796 132 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 PGLYRP1O75594 196 aaPredicted RBP3.96□□□□□ -1.78
EDEM3-203ENST00000439962 CYB5R3P00387 301 aaPredicted RBP3.96□□□□□ -1.78
EDEM3-203ENST00000439962 IGLV1-44P01699 117 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 S100A8P05109 93 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 KITLGP21583 273 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 SULT1A1P50225 295 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 RAB13P51153 203 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 GPM6AP51674 278 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 FXYD4P59646 89 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 PNRC1Q12796 327 aaPredicted RBP3.96□□□□□ -1.78
EDEM3-203ENST00000439962 CLINT1Q14677 625 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 HERPUD1Q15011 391 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 FAM74A3Q4VXF1 159 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 KHDC3LQ587J8 217 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 ZNF506Q5JVG8 444 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 ZNF818PQ6ZRF7 136 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 PLPPR1Q8TBJ4 325 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 ERGIC1Q969X5 290 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 FGF23Q9GZV9 251 aaPredicted RBP3.96□□□□□ -1.78
EDEM3-203ENST00000439962 MS4A7Q9GZW8 240 aaPredicted RBP3.96□□□□□ -1.78
EDEM3-203ENST00000439962 TMEM242Q9NWH2 141 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 MLXQ9UH92 298 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 ZDHHC8Q9ULC8 765 aa3.96□□□□□ -1.78
EDEM3-203ENST00000439962 RAI1Q7Z5J4 1906 aaPredicted RBP3.95□□□□□ -1.78
EDEM3-203ENST00000439962 TRAV24A0A0B4J272 114 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 TXNL1O43396 289 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 PTBP3O95758 552 aaKnown RBP3.95□□□□□ -1.78
EDEM3-203ENST00000439962 PRKACAP17612 351 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 GLRXP35754 106 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 CFHR2P36980 270 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 EFNA4P52798 201 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 HBG1P69891 147 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 HBG2P69892 147 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 LCN2P80188 198 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 TMEM249Q2WGJ8 235 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 ZNF718Q3SXZ3 478 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 AARDQ4LEZ3 155 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 PHLDA2Q53GA4 152 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 PRAMEF6Q5VXH4 476 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 ZNF826PQ6ZT77 177 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 ZNF561Q8N587 486 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 OR52M1Q8NGK5 317 aa3.95□□□□□ -1.78
EDEM3-203ENST00000439962 MBD3L1Q8WWY6 194 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms