RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 GNB3P16520 340 aa15.72■□□□□ 0.11
NCKIPSD-206ENST00000439518 RAB3BP20337 219 aa15.72■□□□□ 0.11
NCKIPSD-206ENST00000439518 GADD45AP24522 165 aa15.72■□□□□ 0.11
NCKIPSD-206ENST00000439518 ECI1P42126 302 aa15.72■□□□□ 0.11
NCKIPSD-206ENST00000439518 INSL3P51460 131 aa15.72■□□□□ 0.11
NCKIPSD-206ENST00000439518 GABARAPL2P60520 117 aa15.72■□□□□ 0.11
NCKIPSD-206ENST00000439518 RPS16P62249 146 aaKnown RBP15.72■□□□□ 0.11
NCKIPSD-206ENST00000439518 MRPS15P82914 257 aaKnown RBP15.72■□□□□ 0.11
NCKIPSD-206ENST00000439518 CASTOR1Q8WTX7 329 aa15.72■□□□□ 0.11
NCKIPSD-206ENST00000439518 PRR25Q96S07 402 aa15.72■□□□□ 0.11
NCKIPSD-206ENST00000439518 CLCC1Q96S66 551 aa15.72■□□□□ 0.11
NCKIPSD-206ENST00000439518 FAM103A1Q9BTL3 118 aaKnown RBP15.72■□□□□ 0.11
NCKIPSD-206ENST00000439518 ALX4Q9H161 411 aaPredicted RBP15.72■□□□□ 0.11
NCKIPSD-206ENST00000439518 TPSG1Q9NRR2 321 aa15.72■□□□□ 0.11
NCKIPSD-206ENST00000439518 A0A0B4J203 849 aa15.71■□□□□ 0.11
NCKIPSD-206ENST00000439518 BET1O15155 118 aa15.71■□□□□ 0.11
NCKIPSD-206ENST00000439518 CA2P00918 260 aa15.71■□□□□ 0.11
NCKIPSD-206ENST00000439518 APOA2P02652 100 aa15.71■□□□□ 0.11
NCKIPSD-206ENST00000439518 OR8U9P0C7N5 309 aa15.71■□□□□ 0.11
NCKIPSD-206ENST00000439518 HIST1H1DP16402 221 aaKnown RBP15.71■□□□□ 0.11
NCKIPSD-206ENST00000439518 ACTBL2Q562R1 376 aa15.71■□□□□ 0.11
NCKIPSD-206ENST00000439518 C22orf42Q6IC83 251 aa15.71■□□□□ 0.11
NCKIPSD-206ENST00000439518 PYHIN1Q6K0P9 492 aa15.71■□□□□ 0.11
NCKIPSD-206ENST00000439518 OR10J5Q8NHC4 309 aa15.71■□□□□ 0.11
NCKIPSD-206ENST00000439518 ABHD5Q8WTS1 349 aa15.71■□□□□ 0.11
NCKIPSD-206ENST00000439518 DCUN1D4Q92564 292 aa15.71■□□□□ 0.11
NCKIPSD-206ENST00000439518 FLYWCH2Q96CP2 140 aaKnown RBP15.71■□□□□ 0.11
NCKIPSD-206ENST00000439518 SORL1Q92673 2214 aa15.7■□□□□ 0.1
NCKIPSD-206ENST00000439518 STAB2Q8WWQ8 2551 aa15.7■□□□□ 0.1
NCKIPSD-206ENST00000439518 ERICH4A6NGS2 130 aa15.7■□□□□ 0.1
NCKIPSD-206ENST00000439518 LGALS1P09382 135 aaKnown RBP15.7■□□□□ 0.1
NCKIPSD-206ENST00000439518 UBE2UQ5VVX9 321 aa15.7■□□□□ 0.1
NCKIPSD-206ENST00000439518 UNQ5815/PRO19632Q6UWF5 114 aa15.7■□□□□ 0.1
NCKIPSD-206ENST00000439518 LFNGQ8NES3 379 aa15.7■□□□□ 0.1
NCKIPSD-206ENST00000439518 SLC35D1Q9NTN3 355 aa15.7■□□□□ 0.1
NCKIPSD-206ENST00000439518 SDHAF2Q9NX18 166 aa15.7■□□□□ 0.1
NCKIPSD-206ENST00000439518 ZNF230Q9UIE0 474 aaPredicted RBP15.7■□□□□ 0.1
NCKIPSD-206ENST00000439518 METTL21EPA6NDL7 271 aa15.69■□□□□ 0.1
NCKIPSD-206ENST00000439518 OVOL1O14753 267 aa15.69■□□□□ 0.1
NCKIPSD-206ENST00000439518 SLC25A17O43808 307 aa15.69■□□□□ 0.1
NCKIPSD-206ENST00000439518 IGLV2-23P01705 113 aa15.69■□□□□ 0.1
NCKIPSD-206ENST00000439518 SSBP2P81877 361 aaPredicted RBP15.69■□□□□ 0.1
NCKIPSD-206ENST00000439518 SRSF7Q16629 238 aaKnown RBP eCLIP15.69■□□□□ 0.1
NCKIPSD-206ENST00000439518 Q6ZS49 121 aa15.69■□□□□ 0.1
NCKIPSD-206ENST00000439518 SPARTQ8N0X7 666 aa15.69■□□□□ 0.1
NCKIPSD-206ENST00000439518 MAFIPQ8WZ33 124 aa15.69■□□□□ 0.1
NCKIPSD-206ENST00000439518 ARPC1AQ92747 370 aa15.69■□□□□ 0.1
NCKIPSD-206ENST00000439518 DLX4Q92988 240 aaPredicted RBP15.69■□□□□ 0.1
NCKIPSD-206ENST00000439518 C5orf30Q96GV9 206 aa15.69■□□□□ 0.1
NCKIPSD-206ENST00000439518 OR2D2Q9H210 308 aa15.69■□□□□ 0.1
NCKIPSD-206ENST00000439518 ZNF256Q9Y2P7 627 aaPredicted RBP15.69■□□□□ 0.1
NCKIPSD-206ENST00000439518 A0A075B6Q4 140 aa15.68■□□□□ 0.1
NCKIPSD-206ENST00000439518 LINC01619G3V211 115 aa15.68■□□□□ 0.1
NCKIPSD-206ENST00000439518 ARPC1BO15143 372 aaKnown RBP15.68■□□□□ 0.1
NCKIPSD-206ENST00000439518 CRYGBP07316 175 aa15.68■□□□□ 0.1
NCKIPSD-206ENST00000439518 FGF9P31371 208 aaPredicted RBP15.68■□□□□ 0.1
NCKIPSD-206ENST00000439518 LGALS7P47929 136 aa15.68■□□□□ 0.1
NCKIPSD-206ENST00000439518 FXYD3Q14802 87 aa15.68■□□□□ 0.1
NCKIPSD-206ENST00000439518 ZNF429Q86V71 674 aa15.68■□□□□ 0.1
NCKIPSD-206ENST00000439518 IGHV4OR15-8A0A075B7B6 117 aa15.67■□□□□ 0.1
NCKIPSD-206ENST00000439518 A0A087WW49 117 aa15.67■□□□□ 0.1
NCKIPSD-206ENST00000439518 ATP6V1G2O95670 118 aa15.67■□□□□ 0.1
NCKIPSD-206ENST00000439518 NHLRC4P0CG21 123 aaPredicted RBP15.67■□□□□ 0.1
NCKIPSD-206ENST00000439518 SLURP1P55000 103 aa15.67■□□□□ 0.1
NCKIPSD-206ENST00000439518 TAGLNQ01995 201 aaKnown RBP15.67■□□□□ 0.1
NCKIPSD-206ENST00000439518 PJVKQ0ZLH3 352 aa15.67■□□□□ 0.1
NCKIPSD-206ENST00000439518 GRPEL2Q8TAA5 225 aa15.67■□□□□ 0.1
NCKIPSD-206ENST00000439518 RHOVQ96L33 236 aa15.67■□□□□ 0.1
NCKIPSD-206ENST00000439518 MS4A10Q96PG2 267 aa15.67■□□□□ 0.1
NCKIPSD-206ENST00000439518 ATG5Q9H1Y0 275 aa15.67■□□□□ 0.1
NCKIPSD-206ENST00000439518 SLA2Q9H6Q3 261 aa15.67■□□□□ 0.1
NCKIPSD-206ENST00000439518 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.67■□□□□ 0.1
NCKIPSD-206ENST00000439518 TXNL4BQ9NX01 149 aaKnown RBP15.67■□□□□ 0.1
NCKIPSD-206ENST00000439518 ELF5Q9UKW6 265 aaPredicted RBP15.67■□□□□ 0.1
NCKIPSD-206ENST00000439518 IGKV1D-8A0A087WSZ0 117 aa15.66■□□□□ 0.1
NCKIPSD-206ENST00000439518 SMIM30A4D0T7 59 aa15.66■□□□□ 0.1
NCKIPSD-206ENST00000439518 IGHV3-11P01762 117 aa15.66■□□□□ 0.1
NCKIPSD-206ENST00000439518 DTYMKP23919 212 aa15.66■□□□□ 0.1
NCKIPSD-206ENST00000439518 TALDO1P37837 337 aa15.66■□□□□ 0.1
NCKIPSD-206ENST00000439518 TPPP2P59282 170 aa15.66■□□□□ 0.1
NCKIPSD-206ENST00000439518 ARFRP1Q13795 201 aa15.66■□□□□ 0.1
NCKIPSD-206ENST00000439518 ARL6IP1Q15041 203 aa15.66■□□□□ 0.1
NCKIPSD-206ENST00000439518 H1FOOQ8IZA3 346 aaPredicted RBP15.66■□□□□ 0.1
NCKIPSD-206ENST00000439518 CENPOQ9BU64 300 aa15.66■□□□□ 0.1
NCKIPSD-206ENST00000439518 NOTOA8MTQ0 251 aa15.65■□□□□ 0.1
NCKIPSD-206ENST00000439518 HSPB1P04792 205 aaKnown RBP15.65■□□□□ 0.1
NCKIPSD-206ENST00000439518 PSMB9P28065 219 aa15.65■□□□□ 0.1
NCKIPSD-206ENST00000439518 CD40LGP29965 261 aa15.65■□□□□ 0.1
NCKIPSD-206ENST00000439518 CDNFQ49AH0 187 aa15.65■□□□□ 0.1
NCKIPSD-206ENST00000439518 TMEM177Q53S58 311 aa15.65■□□□□ 0.1
NCKIPSD-206ENST00000439518 BVESQ8NE79 360 aa15.65■□□□□ 0.1
NCKIPSD-206ENST00000439518 FCGR1BQ92637 280 aa15.65■□□□□ 0.1
NCKIPSD-206ENST00000439518 HARBI1Q96MB7 349 aa15.65■□□□□ 0.1
NCKIPSD-206ENST00000439518 GINS4Q9BRT9 223 aa15.65■□□□□ 0.1
NCKIPSD-206ENST00000439518 YTHDF1Q9BYJ9 559 aaKnown RBP15.65■□□□□ 0.1
NCKIPSD-206ENST00000439518 SRRM4A7MD48 611 aaKnown RBP15.64■□□□□ 0.09
NCKIPSD-206ENST00000439518 TRGV3P03979 118 aa15.64■□□□□ 0.09
NCKIPSD-206ENST00000439518 MRGPRG-AS1Q2M3A8 158 aa15.64■□□□□ 0.09
NCKIPSD-206ENST00000439518 ACSM6Q6P461 480 aa15.64■□□□□ 0.09
NCKIPSD-206ENST00000439518 TPRA1Q86W33 373 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms