RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 ZNF562Q6V9R5 426 aa8.23□□□□□ -1.09
MCF2L-216ENST00000439475 HOGA1Q86XE5 327 aa8.23□□□□□ -1.09
MCF2L-216ENST00000439475 ZNF695Q8IW36 515 aa8.23□□□□□ -1.09
MCF2L-216ENST00000439475 ZNF645Q8N7E2 425 aa8.23□□□□□ -1.09
MCF2L-216ENST00000439475 KLHL30-AS1Q8NEE0 82 aa8.23□□□□□ -1.09
MCF2L-216ENST00000439475 BEST4Q8NFU0 473 aa8.23□□□□□ -1.09
MCF2L-216ENST00000439475 OR13F1Q8NGS4 319 aa8.23□□□□□ -1.09
MCF2L-216ENST00000439475 ACOT12Q8WYK0 555 aa8.23□□□□□ -1.09
MCF2L-216ENST00000439475 SLC25A46Q96AG3 418 aa8.23□□□□□ -1.09
MCF2L-216ENST00000439475 SLC25A38Q96DW6 304 aa8.23□□□□□ -1.09
MCF2L-216ENST00000439475 MRPS26Q9BYN8 205 aaKnown RBP8.23□□□□□ -1.09
MCF2L-216ENST00000439475 GPR61Q9BZJ8 451 aa8.23□□□□□ -1.09
MCF2L-216ENST00000439475 AUNIPQ9H7T9 357 aa8.23□□□□□ -1.09
MCF2L-216ENST00000439475 PARP11Q9NR21 331 aa8.23□□□□□ -1.09
MCF2L-216ENST00000439475 TENM1Q9UKZ4 2725 aa8.22□□□□□ -1.09
MCF2L-216ENST00000439475 TRAV41A0A0B4J266 112 aa8.22□□□□□ -1.09
MCF2L-216ENST00000439475 ATP6V0E1O15342 81 aa8.22□□□□□ -1.09
MCF2L-216ENST00000439475 SSX5O60225 188 aa8.22□□□□□ -1.09
MCF2L-216ENST00000439475 HLA-DQB1P01920 261 aa8.22□□□□□ -1.09
MCF2L-216ENST00000439475 NFYAP23511 347 aaPredicted RBP8.22□□□□□ -1.09
MCF2L-216ENST00000439475 VBP1P61758 197 aa8.22□□□□□ -1.09
MCF2L-216ENST00000439475 NCS1P62166 190 aa8.22□□□□□ -1.09
MCF2L-216ENST00000439475 CX3CL1P78423 397 aa8.22□□□□□ -1.09
MCF2L-216ENST00000439475 PSG5Q15238 335 aa8.22□□□□□ -1.09
MCF2L-216ENST00000439475 TMEM69Q5SWH9 247 aa8.22□□□□□ -1.09
MCF2L-216ENST00000439475 ANKRD13BQ86YJ7 626 aa8.22□□□□□ -1.09
MCF2L-216ENST00000439475 C1QL4Q86Z23 238 aa8.22□□□□□ -1.09
MCF2L-216ENST00000439475 SAMD12Q8N8I0 201 aa8.22□□□□□ -1.09
MCF2L-216ENST00000439475 BVESQ8NE79 360 aa8.22□□□□□ -1.09
MCF2L-216ENST00000439475 AP3S1Q92572 193 aa8.22□□□□□ -1.09
MCF2L-216ENST00000439475 RBMXL1Q96E39 390 aaKnown RBP8.22□□□□□ -1.09
MCF2L-216ENST00000439475 HARBI1Q96MB7 349 aa8.22□□□□□ -1.09
MCF2L-216ENST00000439475 CLCC1Q96S66 551 aa8.22□□□□□ -1.09
MCF2L-216ENST00000439475 DCUN1D5Q9BTE7 237 aa8.22□□□□□ -1.09
MCF2L-216ENST00000439475 MCRIP2Q9BUT9 160 aaKnown RBP8.22□□□□□ -1.09
MCF2L-216ENST00000439475 IFT46Q9NQC8 304 aa8.22□□□□□ -1.09
MCF2L-216ENST00000439475 NECAP2Q9NVZ3 263 aa8.22□□□□□ -1.09
MCF2L-216ENST00000439475 COMMD3Q9UBI1 195 aa8.22□□□□□ -1.09
MCF2L-216ENST00000439475 PRELID3BQ9Y3B1 194 aa8.22□□□□□ -1.09
MCF2L-216ENST00000439475 WSB1Q9Y6I7 421 aa8.22□□□□□ -1.09
MCF2L-216ENST00000439475 A0A1W2PN81 502 aa8.21□□□□□ -1.1
MCF2L-216ENST00000439475 G3V4G9 280 aa8.21□□□□□ -1.1
MCF2L-216ENST00000439475 CNIH1O95406 144 aa8.21□□□□□ -1.1
MCF2L-216ENST00000439475 RPLP1P05386 114 aaKnown RBP8.21□□□□□ -1.1
MCF2L-216ENST00000439475 PPIFP30405 207 aaKnown RBP8.21□□□□□ -1.1
MCF2L-216ENST00000439475 DUTP33316 252 aaKnown RBP8.21□□□□□ -1.1
MCF2L-216ENST00000439475 PRSS3P35030 304 aa8.21□□□□□ -1.1
MCF2L-216ENST00000439475 CHRNA7P36544 502 aa8.21□□□□□ -1.1
MCF2L-216ENST00000439475 ECSCRQ19T08 205 aa8.21□□□□□ -1.1
MCF2L-216ENST00000439475 VMA21Q3ZAQ7 101 aa8.21□□□□□ -1.1
MCF2L-216ENST00000439475 AKIRIN2Q53H80 203 aa8.21□□□□□ -1.1
MCF2L-216ENST00000439475 TMEM177Q53S58 311 aa8.21□□□□□ -1.1
MCF2L-216ENST00000439475 SAMD5Q5TGI4 173 aa8.21□□□□□ -1.1
MCF2L-216ENST00000439475 C8orf86Q6ZUL3 223 aa8.21□□□□□ -1.1
MCF2L-216ENST00000439475 GPR141Q7Z602 305 aa8.21□□□□□ -1.1
MCF2L-216ENST00000439475 PPP1R27Q86WC6 154 aa8.21□□□□□ -1.1
MCF2L-216ENST00000439475 RNF152Q8N8N0 203 aa8.21□□□□□ -1.1
MCF2L-216ENST00000439475 ZBTB34Q8NCN2 500 aa8.21□□□□□ -1.1
MCF2L-216ENST00000439475 OSR1Q8TAX0 266 aaPredicted RBP8.21□□□□□ -1.1
MCF2L-216ENST00000439475 DPF1Q92782 380 aa8.21□□□□□ -1.1
MCF2L-216ENST00000439475 BORCS5Q969J3 196 aa8.21□□□□□ -1.1
MCF2L-216ENST00000439475 RCC1LQ96I51 464 aaKnown RBP8.21□□□□□ -1.1
MCF2L-216ENST00000439475 TMEM68Q96MH6 324 aa8.21□□□□□ -1.1
MCF2L-216ENST00000439475 MRPS7Q9Y2R9 242 aaKnown RBP8.21□□□□□ -1.1
MCF2L-216ENST00000439475 NUBP2Q9Y5Y2 271 aa8.21□□□□□ -1.1
MCF2L-216ENST00000439475 FBN3Q75N90 2809 aa8.2□□□□□ -1.1
MCF2L-216ENST00000439475 G3V318 75 aa8.2□□□□□ -1.1
MCF2L-216ENST00000439475 FCN1O00602 326 aa8.2□□□□□ -1.1
MCF2L-216ENST00000439475 SLC25A17O43808 307 aa8.2□□□□□ -1.1
MCF2L-216ENST00000439475 CREBL2O60519 120 aaPredicted RBP8.2□□□□□ -1.1
MCF2L-216ENST00000439475 TUSC2O75896 110 aa8.2□□□□□ -1.1
MCF2L-216ENST00000439475 CA2P00918 260 aa8.2□□□□□ -1.1
MCF2L-216ENST00000439475 APOA1P02647 267 aa8.2□□□□□ -1.1
MCF2L-216ENST00000439475 IGKV1-16P04430 117 aa8.2□□□□□ -1.1
MCF2L-216ENST00000439475 PSMB8P28062 276 aa8.2□□□□□ -1.1
MCF2L-216ENST00000439475 FCGR2CP31995 323 aa8.2□□□□□ -1.1
MCF2L-216ENST00000439475 CRIP2P52943 208 aaPredicted RBP8.2□□□□□ -1.1
MCF2L-216ENST00000439475 LINC00205P59089 165 aa8.2□□□□□ -1.1
MCF2L-216ENST00000439475 TAS2R20P59543 309 aa8.2□□□□□ -1.1
MCF2L-216ENST00000439475 CFHR3Q02985 330 aa8.2□□□□□ -1.1
MCF2L-216ENST00000439475 FXYD3Q14802 87 aa8.2□□□□□ -1.1
MCF2L-216ENST00000439475 PDLIM3Q53GG5 364 aaPredicted RBP8.2□□□□□ -1.1
MCF2L-216ENST00000439475 OXLD1Q5BKU9 147 aa8.2□□□□□ -1.1
MCF2L-216ENST00000439475 PYHIN1Q6K0P9 492 aa8.2□□□□□ -1.1
MCF2L-216ENST00000439475 UNQ5815/PRO19632Q6UWF5 114 aa8.2□□□□□ -1.1
MCF2L-216ENST00000439475 ZNF66Q6ZN08 573 aa8.2□□□□□ -1.1
MCF2L-216ENST00000439475 LCNL1Q6ZST4 164 aa8.2□□□□□ -1.1
MCF2L-216ENST00000439475 REC114Q7Z4M0 266 aa8.2□□□□□ -1.1
MCF2L-216ENST00000439475 GVQW1Q8N7I0 195 aa8.2□□□□□ -1.1
MCF2L-216ENST00000439475 TEX45Q8NA69 505 aa8.2□□□□□ -1.1
MCF2L-216ENST00000439475 OR5AP2Q8NGF4 316 aa8.2□□□□□ -1.1
MCF2L-216ENST00000439475 OR5M8Q8NGP6 311 aa8.2□□□□□ -1.1
MCF2L-216ENST00000439475 UBE2E2Q96LR5 201 aa8.2□□□□□ -1.1
MCF2L-216ENST00000439475 HSD17B10Q99714 261 aaKnown RBP8.2□□□□□ -1.1
MCF2L-216ENST00000439475 AIFM2Q9BRQ8 373 aa8.2□□□□□ -1.1
MCF2L-216ENST00000439475 ZMAT5Q9UDW3 170 aaKnown RBP8.2□□□□□ -1.1
MCF2L-216ENST00000439475 FOXA2Q9Y261 457 aaPredicted RBP8.2□□□□□ -1.1
MCF2L-216ENST00000439475 VSIG4Q9Y279 399 aa8.2□□□□□ -1.1
MCF2L-216ENST00000439475 RBMX2Q9Y388 322 aaKnown RBP8.2□□□□□ -1.1
MCF2L-216ENST00000439475 FAM25AB3EWG3 89 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms