RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 RPA3P35244 121 aaPredicted RBP1.61□□□□□ -2.15
VPS41-207ENST00000439468 DHRS2Q13268 280 aa1.61□□□□□ -2.15
VPS41-207ENST00000439468 DGAT2L6Q6ZPD8 337 aa1.61□□□□□ -2.15
VPS41-207ENST00000439468 FAM183BPQ6ZVS7 135 aa1.61□□□□□ -2.15
VPS41-207ENST00000439468 COMTD1Q86VU5 262 aa1.61□□□□□ -2.15
VPS41-207ENST00000439468 LYPD6Q86Y78 171 aa1.61□□□□□ -2.15
VPS41-207ENST00000439468 SELENOHQ8IZQ5 122 aaKnown RBP1.61□□□□□ -2.15
VPS41-207ENST00000439468 OR11G2Q8NGC1 345 aa1.61□□□□□ -2.15
VPS41-207ENST00000439468 CCDC124Q96CT7 223 aaKnown RBP1.61□□□□□ -2.15
VPS41-207ENST00000439468 REEP6Q96HR9 211 aa1.61□□□□□ -2.15
VPS41-207ENST00000439468 TRIB3Q96RU7 358 aa1.61□□□□□ -2.15
VPS41-207ENST00000439468 PKMYT1Q99640 499 aa1.61□□□□□ -2.15
VPS41-207ENST00000439468 ABCG5Q9H222 651 aa1.61□□□□□ -2.15
VPS41-207ENST00000439468 GOLPH3Q9H4A6 298 aa1.61□□□□□ -2.15
VPS41-207ENST00000439468 RHOFQ9HBH0 211 aa1.61□□□□□ -2.15
VPS41-207ENST00000439468 TREM1Q9NP99 234 aa1.61□□□□□ -2.15
VPS41-207ENST00000439468 OR5V1Q9UGF6 321 aa1.61□□□□□ -2.15
VPS41-207ENST00000439468 POMPQ9Y244 141 aa1.61□□□□□ -2.15
VPS41-207ENST00000439468 FLNAP21333 2647 aaKnown RBP1.61□□□□□ -2.15
VPS41-207ENST00000439468 ABCB11O95342 1321 aa1.61□□□□□ -2.15
VPS41-207ENST00000439468 RTTNQ86VV8 2226 aa1.6□□□□□ -2.15
VPS41-207ENST00000439468 RFX7Q2KHR2 1363 aa1.6□□□□□ -2.15
VPS41-207ENST00000439468 KMT2CQ8NEZ4 4911 aaKnown RBP1.6□□□□□ -2.15
VPS41-207ENST00000439468 SCN10AQ9Y5Y9 1956 aa1.6□□□□□ -2.15
VPS41-207ENST00000439468 SDK2Q58EX2 2172 aa1.6□□□□□ -2.15
VPS41-207ENST00000439468 IGLV10-54A0A075B6I4 117 aa1.6□□□□□ -2.15
VPS41-207ENST00000439468 IGHV1-45A0A0A0MS14 117 aa1.6□□□□□ -2.15
VPS41-207ENST00000439468 A0A1W2PRG6 482 aa1.6□□□□□ -2.15
VPS41-207ENST00000439468 SDHAF1A6NFY7 115 aa1.6□□□□□ -2.15
VPS41-207ENST00000439468 OR5H14A6NHG9 310 aa1.6□□□□□ -2.15
VPS41-207ENST00000439468 I3L4J1 428 aa1.6□□□□□ -2.15
VPS41-207ENST00000439468 SULT1C2O00338 296 aa1.6□□□□□ -2.15
VPS41-207ENST00000439468 POLR3GO15318 223 aaPredicted RBP1.6□□□□□ -2.15
VPS41-207ENST00000439468 TCF21O43680 179 aa1.6□□□□□ -2.15
VPS41-207ENST00000439468 HLA-AP01891 365 aaKnown RBP1.6□□□□□ -2.15
VPS41-207ENST00000439468 SLC35E2BP0CK96 405 aa1.6□□□□□ -2.15
VPS41-207ENST00000439468 NQO2P16083 231 aa1.6□□□□□ -2.15
VPS41-207ENST00000439468 COILP38432 576 aaPredicted RBP1.6□□□□□ -2.15
VPS41-207ENST00000439468 KCNJ3P48549 501 aa1.6□□□□□ -2.15
VPS41-207ENST00000439468 RAB31Q13636 194 aa1.6□□□□□ -2.15
VPS41-207ENST00000439468 ZBTB6Q15916 424 aa1.6□□□□□ -2.15
VPS41-207ENST00000439468 HCP5Q6MZN7 132 aa1.6□□□□□ -2.15
VPS41-207ENST00000439468 COPS6Q7L5N1 327 aa1.6□□□□□ -2.15
VPS41-207ENST00000439468 OLIG3Q7RTU3 272 aa1.6□□□□□ -2.15
VPS41-207ENST00000439468 MSRB3Q8IXL7 192 aa1.6□□□□□ -2.15
VPS41-207ENST00000439468 CPNE9Q8IYJ1 553 aa1.6□□□□□ -2.15
VPS41-207ENST00000439468 SPERTQ8NA61 448 aa1.6□□□□□ -2.15
VPS41-207ENST00000439468 Q8NAQ8 132 aa1.6□□□□□ -2.15
VPS41-207ENST00000439468 LY6G5BQ8NDX9 201 aa1.6□□□□□ -2.15
VPS41-207ENST00000439468 OR5P3Q8WZ94 311 aa1.6□□□□□ -2.15
VPS41-207ENST00000439468 APOBEC3DQ96AK3 386 aaPredicted RBP1.6□□□□□ -2.15
VPS41-207ENST00000439468 OR2D2Q9H210 308 aa1.6□□□□□ -2.15
VPS41-207ENST00000439468 TGP01266 2768 aa1.6□□□□□ -2.15
VPS41-207ENST00000439468 SPAG17Q6Q759 2223 aa1.6□□□□□ -2.15
VPS41-207ENST00000439468 ZBED9Q6R2W3 1325 aa1.6□□□□□ -2.15
VPS41-207ENST00000439468 MED13Q9UHV7 2174 aa1.59□□□□□ -2.15
VPS41-207ENST00000439468 NOTCH1P46531 2555 aa1.59□□□□□ -2.15
VPS41-207ENST00000439468 VPS13CQ709C8 3753 aa1.59□□□□□ -2.15
VPS41-207ENST00000439468 TRAV8-2A0A0B4J237 113 aa1.59□□□□□ -2.15
VPS41-207ENST00000439468 A0A1B0GX12 115 aa1.59□□□□□ -2.15
VPS41-207ENST00000439468 E7EQL1 145 aa1.59□□□□□ -2.15
VPS41-207ENST00000439468 RNASEK-C17orf49H0YIS7 233 aa1.59□□□□□ -2.15
VPS41-207ENST00000439468 C3orf84H3BNL1 204 aa1.59□□□□□ -2.15
VPS41-207ENST00000439468 SMLR1H3BR10 107 aa1.59□□□□□ -2.15
VPS41-207ENST00000439468 UBDO15205 165 aa1.59□□□□□ -2.15
VPS41-207ENST00000439468 NDUFS6O75380 124 aaKnown RBP1.59□□□□□ -2.15
VPS41-207ENST00000439468 SNAP29O95721 258 aa1.59□□□□□ -2.15
VPS41-207ENST00000439468 PDYNP01213 254 aa1.59□□□□□ -2.15
VPS41-207ENST00000439468 RD3LP0DJH9 198 aa1.59□□□□□ -2.15
VPS41-207ENST00000439468 CBX5P45973 191 aa1.59□□□□□ -2.15
VPS41-207ENST00000439468 TNFRSF9Q07011 255 aa1.59□□□□□ -2.15
VPS41-207ENST00000439468 XRCC4Q13426 336 aa1.59□□□□□ -2.15
VPS41-207ENST00000439468 FLOT2Q14254 428 aa1.59□□□□□ -2.15
VPS41-207ENST00000439468 GOLGA7BQ2TAP0 167 aa1.59□□□□□ -2.15
VPS41-207ENST00000439468 LAMTOR1Q6IAA8 161 aa1.59□□□□□ -2.15
VPS41-207ENST00000439468 CMTM2Q8TAZ6 248 aa1.59□□□□□ -2.15
VPS41-207ENST00000439468 LMX1AQ8TE12 382 aa1.59□□□□□ -2.15
VPS41-207ENST00000439468 MRAP2Q96G30 205 aa1.59□□□□□ -2.15
VPS41-207ENST00000439468 FAAP24Q9BTP7 215 aa1.59□□□□□ -2.15
VPS41-207ENST00000439468 POTEKPQ9BYX7 375 aa1.59□□□□□ -2.15
VPS41-207ENST00000439468 TRIM4Q9C037 500 aa1.59□□□□□ -2.15
VPS41-207ENST00000439468 URGCP-MRPS24S4R325 110 aa1.59□□□□□ -2.15
VPS41-207ENST00000439468 SPTBN1Q01082 2364 aaKnown RBP1.59□□□□□ -2.16
VPS41-207ENST00000439468 YLPM1P49750 1951 aaKnown RBP1.59□□□□□ -2.16
VPS41-207ENST00000439468 URB1O60287 2271 aaKnown RBP1.59□□□□□ -2.16
VPS41-207ENST00000439468 AHCTF1Q8WYP5 2266 aa1.59□□□□□ -2.16
VPS41-207ENST00000439468 PARP14Q460N5 1801 aa1.59□□□□□ -2.16
VPS41-207ENST00000439468 MCM3APO60318 1980 aa1.58□□□□□ -2.16
VPS41-207ENST00000439468 FAM25EA8MYX2 175 aa1.58□□□□□ -2.16
VPS41-207ENST00000439468 K7ERQ8 282 aa1.58□□□□□ -2.16
VPS41-207ENST00000439468 YKT6O15498 198 aa1.58□□□□□ -2.16
VPS41-207ENST00000439468 FABP7O15540 132 aa1.58□□□□□ -2.16
VPS41-207ENST00000439468 FGF16O43320 207 aa1.58□□□□□ -2.16
VPS41-207ENST00000439468 POP7O75817 140 aaKnown RBP1.58□□□□□ -2.16
VPS41-207ENST00000439468 CYBAP13498 195 aa1.58□□□□□ -2.16
VPS41-207ENST00000439468 ZNF22P17026 224 aaPredicted RBP1.58□□□□□ -2.16
VPS41-207ENST00000439468 SYT1P21579 422 aa1.58□□□□□ -2.16
VPS41-207ENST00000439468 PYCR1P32322 319 aa1.58□□□□□ -2.16
VPS41-207ENST00000439468 PSMD7P51665 324 aa1.58□□□□□ -2.16
VPS41-207ENST00000439468 RAB2AP61019 212 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms