RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 MTIF3Q9H2K0 278 aaKnown RBP11.29□□□□□ -0.6
ACTN1-204ENST00000438964 ELOVL5Q9NYP7 299 aa11.29□□□□□ -0.6
ACTN1-204ENST00000438964 RP1L1Q8IWN7 2480 aaPredicted RBP11.29□□□□□ -0.6
ACTN1-204ENST00000438964 IGHV1OR15-9A0A0B4J2B8 117 aa11.29□□□□□ -0.6
ACTN1-204ENST00000438964 ZNF503-AS2A6NEH8 195 aa11.29□□□□□ -0.6
ACTN1-204ENST00000438964 OR6C6A6NF89 314 aa11.29□□□□□ -0.6
ACTN1-204ENST00000438964 TMEM250H0YL14 139 aa11.29□□□□□ -0.6
ACTN1-204ENST00000438964 RFPL3SP0C7P2 107 aa11.29□□□□□ -0.6
ACTN1-204ENST00000438964 SLC25A6P12236 298 aa11.29□□□□□ -0.6
ACTN1-204ENST00000438964 KITLGP21583 273 aa11.29□□□□□ -0.6
ACTN1-204ENST00000438964 CEACAM8P31997 349 aaPredicted RBP11.29□□□□□ -0.6
ACTN1-204ENST00000438964 KRTCAP3Q53RY4 240 aa11.29□□□□□ -0.6
ACTN1-204ENST00000438964 ZNF784Q8NCA9 323 aaPredicted RBP11.29□□□□□ -0.6
ACTN1-204ENST00000438964 NPCDR1Q9BY65 106 aa11.29□□□□□ -0.6
ACTN1-204ENST00000438964 MRPL18Q9H0U6 180 aaKnown RBP11.29□□□□□ -0.6
ACTN1-204ENST00000438964 FCN1O00602 326 aa11.28□□□□□ -0.6
ACTN1-204ENST00000438964 TNFSF13O75888 250 aa11.28□□□□□ -0.6
ACTN1-204ENST00000438964 UMODP07911 640 aa11.28□□□□□ -0.6
ACTN1-204ENST00000438964 SOX8P57073 446 aa11.28□□□□□ -0.6
ACTN1-204ENST00000438964 FGF12P61328 243 aa11.28□□□□□ -0.6
ACTN1-204ENST00000438964 TMEM183BQ1AE95 376 aa11.28□□□□□ -0.6
ACTN1-204ENST00000438964 NUFIP2Q7Z417 695 aaKnown RBP11.28□□□□□ -0.6
ACTN1-204ENST00000438964 MKXQ8IYA7 352 aa11.28□□□□□ -0.6
ACTN1-204ENST00000438964 SFRP2Q96HF1 295 aa11.28□□□□□ -0.6
ACTN1-204ENST00000438964 ABHD14BQ96IU4 210 aa11.28□□□□□ -0.6
ACTN1-204ENST00000438964 TXN2Q99757 166 aa11.28□□□□□ -0.6
ACTN1-204ENST00000438964 CFHR5Q9BXR6 569 aa11.28□□□□□ -0.6
ACTN1-204ENST00000438964 PPP1R14DQ9NXH3 145 aa11.28□□□□□ -0.6
ACTN1-204ENST00000438964 TRAPPC2LQ9UL33 140 aa11.28□□□□□ -0.6
ACTN1-204ENST00000438964 NCKAP5O14513 1909 aa11.28□□□□□ -0.6
ACTN1-204ENST00000438964 F6UZH7 168 aa11.28□□□□□ -0.6
ACTN1-204ENST00000438964 CCL25O15444 150 aa11.28□□□□□ -0.6
ACTN1-204ENST00000438964 SRP14P37108 136 aaKnown RBP11.28□□□□□ -0.6
ACTN1-204ENST00000438964 CDC34P49427 236 aaPredicted RBP11.28□□□□□ -0.6
ACTN1-204ENST00000438964 PTTG1IPP53801 180 aa11.28□□□□□ -0.6
ACTN1-204ENST00000438964 MSMO1Q15800 293 aa11.28□□□□□ -0.6
ACTN1-204ENST00000438964 FOXL2NBQ6ZUU3 175 aa11.28□□□□□ -0.6
ACTN1-204ENST00000438964 OR5AU1Q8NGC0 362 aa11.28□□□□□ -0.6
ACTN1-204ENST00000438964 OCC1Q8TAD7 63 aa11.28□□□□□ -0.6
ACTN1-204ENST00000438964 SPENQ96T58 3664 aaKnown RBP11.28□□□□□ -0.6
ACTN1-204ENST00000438964 MDFIC2A0A1B0GVS7 189 aa11.27□□□□□ -0.6
ACTN1-204ENST00000438964 DEFB108AA8MXU0 73 aa11.27□□□□□ -0.6
ACTN1-204ENST00000438964 YPEL1O60688 119 aa11.27□□□□□ -0.6
ACTN1-204ENST00000438964 NTF3P20783 257 aa11.27□□□□□ -0.6
ACTN1-204ENST00000438964 TPPP2P59282 170 aa11.27□□□□□ -0.6
ACTN1-204ENST00000438964 RPL30P62888 115 aaKnown RBP11.27□□□□□ -0.6
ACTN1-204ENST00000438964 WIPI1Q5MNZ9 446 aaPredicted RBP11.27□□□□□ -0.6
ACTN1-204ENST00000438964 LCN12Q6JVE5 192 aa11.27□□□□□ -0.6
ACTN1-204ENST00000438964 MRPL21Q7Z2W9 205 aaKnown RBP11.27□□□□□ -0.6
ACTN1-204ENST00000438964 FADS6Q8N9I5 356 aa11.27□□□□□ -0.6
ACTN1-204ENST00000438964 RCHY1Q96PM5 261 aa11.27□□□□□ -0.6
ACTN1-204ENST00000438964 YPEL2Q96QA6 119 aa11.27□□□□□ -0.6
ACTN1-204ENST00000438964 A0A1W2PR77 199 aa11.27□□□□□ -0.61
ACTN1-204ENST00000438964 PIAS2O75928 621 aa11.27□□□□□ -0.61
ACTN1-204ENST00000438964 NDUFB8O95169 186 aa11.27□□□□□ -0.61
ACTN1-204ENST00000438964 OTX2P32243 289 aa11.27□□□□□ -0.61
ACTN1-204ENST00000438964 SPATA45Q537H7 98 aa11.27□□□□□ -0.61
ACTN1-204ENST00000438964 Q6ZN92 141 aa11.27□□□□□ -0.61
ACTN1-204ENST00000438964 CENPVQ7Z7K6 275 aaPredicted RBP11.27□□□□□ -0.61
ACTN1-204ENST00000438964 DRAM1Q8N682 238 aa11.27□□□□□ -0.61
ACTN1-204ENST00000438964 TPRX1Q8N7U7 411 aa11.27□□□□□ -0.61
ACTN1-204ENST00000438964 OR5A2Q8NGI9 324 aa11.27□□□□□ -0.61
ACTN1-204ENST00000438964 ASCL3Q9NQ33 180 aa11.27□□□□□ -0.61
ACTN1-204ENST00000438964 IGHV3-43A0A0B4J1X8 118 aa11.27□□□□□ -0.61
ACTN1-204ENST00000438964 SNURFLB1AK76 121 aa11.27□□□□□ -0.61
ACTN1-204ENST00000438964 S1PR2O95136 353 aa11.27□□□□□ -0.61
ACTN1-204ENST00000438964 OR5G3P0C626 314 aa11.27□□□□□ -0.61
ACTN1-204ENST00000438964 IGHV3-43DP0DP04 118 aa11.27□□□□□ -0.61
ACTN1-204ENST00000438964 COX5AP20674 150 aa11.27□□□□□ -0.61
ACTN1-204ENST00000438964 FXYD3Q14802 87 aa11.27□□□□□ -0.61
ACTN1-204ENST00000438964 SAXO1Q8IYX7 474 aa11.27□□□□□ -0.61
ACTN1-204ENST00000438964 SSMEM1Q8WWF3 244 aa11.27□□□□□ -0.61
ACTN1-204ENST00000438964 PROK2Q9HC23 129 aa11.27□□□□□ -0.61
ACTN1-204ENST00000438964 IL36GQ9NZH8 169 aa11.27□□□□□ -0.61
ACTN1-204ENST00000438964 DIRC3C9JPN6 131 aa11.26□□□□□ -0.61
ACTN1-204ENST00000438964 LIFP15018 202 aa11.26□□□□□ -0.61
ACTN1-204ENST00000438964 COMPP49747 757 aaPredicted RBP11.26□□□□□ -0.61
ACTN1-204ENST00000438964 LHX2P50458 406 aa11.26□□□□□ -0.61
ACTN1-204ENST00000438964 Q6ZSR3 168 aa11.26□□□□□ -0.61
ACTN1-204ENST00000438964 OR10P1Q8NGE3 313 aa11.26□□□□□ -0.61
ACTN1-204ENST00000438964 UBE2ZQ9H832 354 aaPredicted RBP11.26□□□□□ -0.61
ACTN1-204ENST00000438964 DLL3Q9NYJ7 618 aa11.26□□□□□ -0.61
ACTN1-204ENST00000438964 ODAMA1E959 279 aa11.26□□□□□ -0.61
ACTN1-204ENST00000438964 CBR3O75828 277 aa11.26□□□□□ -0.61
ACTN1-204ENST00000438964 TYMSP04818 313 aa11.26□□□□□ -0.61
ACTN1-204ENST00000438964 ARL14EPLP0DKL9 152 aa11.26□□□□□ -0.61
ACTN1-204ENST00000438964 AMTP48728 403 aa11.26□□□□□ -0.61
ACTN1-204ENST00000438964 TMEM144Q7Z5S9 345 aa11.26□□□□□ -0.61
ACTN1-204ENST00000438964 CXorf67Q86X51 503 aaPredicted RBP11.26□□□□□ -0.61
ACTN1-204ENST00000438964 SLC35E1Q96K37 410 aa11.26□□□□□ -0.61
ACTN1-204ENST00000438964 UHRF2Q96PU4 802 aa11.26□□□□□ -0.61
ACTN1-204ENST00000438964 TNCP24821 2201 aa11.26□□□□□ -0.61
ACTN1-204ENST00000438964 M0QZK8 103 aa11.25□□□□□ -0.61
ACTN1-204ENST00000438964 RRHO14718 337 aa11.25□□□□□ -0.61
ACTN1-204ENST00000438964 PSG7Q13046 419 aa11.25□□□□□ -0.61
ACTN1-204ENST00000438964 COL5A1-AS1Q5SY13 56 aa11.25□□□□□ -0.61
ACTN1-204ENST00000438964 FBXO46Q6PJ61 603 aaPredicted RBP11.25□□□□□ -0.61
ACTN1-204ENST00000438964 TEX43Q6ZNM6 134 aa11.25□□□□□ -0.61
ACTN1-204ENST00000438964 APOBEC3DQ96AK3 386 aaPredicted RBP11.25□□□□□ -0.61
ACTN1-204ENST00000438964 CCDC74BQ96LY2 380 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms