RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 PDPNQ86YL7 162 aa14.81□□□□□ -0.04
HDAC6-208ENST00000438518 SIGLECL1Q8N7X8 197 aa14.81□□□□□ -0.04
HDAC6-208ENST00000438518 MARCH1Q8TCQ1 289 aa14.81□□□□□ -0.04
HDAC6-208ENST00000438518 MRGPRFQ96AM1 343 aa14.81□□□□□ -0.04
HDAC6-208ENST00000438518 OCEL1Q9H607 264 aa14.81□□□□□ -0.04
HDAC6-208ENST00000438518 SLC2A9Q9NRM0 540 aa14.81□□□□□ -0.04
HDAC6-208ENST00000438518 GPR132Q9UNW8 380 aa14.81□□□□□ -0.04
HDAC6-208ENST00000438518 PRELID3BQ9Y3B1 194 aa14.81□□□□□ -0.04
HDAC6-208ENST00000438518 LINC00854A0A1B0GVQ3 168 aa14.8□□□□□ -0.04
HDAC6-208ENST00000438518 MDFIC2A0A1B0GVS7 189 aa14.8□□□□□ -0.04
HDAC6-208ENST00000438518 CLDN34H7C241 214 aa14.8□□□□□ -0.04
HDAC6-208ENST00000438518 B3GALNT1O75752 331 aa14.8□□□□□ -0.04
HDAC6-208ENST00000438518 KIR2DS2P43631 304 aa14.8□□□□□ -0.04
HDAC6-208ENST00000438518 HILS1P60008 231 aa14.8□□□□□ -0.04
HDAC6-208ENST00000438518 EBI3Q14213 229 aa14.8□□□□□ -0.04
HDAC6-208ENST00000438518 DHRS7BQ6IAN0 325 aaPredicted RBP14.8□□□□□ -0.04
HDAC6-208ENST00000438518 CD300LFQ8TDQ1 290 aa14.8□□□□□ -0.04
HDAC6-208ENST00000438518 C5orf30Q96GV9 206 aa14.8□□□□□ -0.04
HDAC6-208ENST00000438518 RNF5Q99942 180 aa14.8□□□□□ -0.04
HDAC6-208ENST00000438518 FAM212BQ9NTI7 297 aaPredicted RBP14.8□□□□□ -0.04
HDAC6-208ENST00000438518 LIN7CQ9NUP9 197 aaKnown RBP14.8□□□□□ -0.04
HDAC6-208ENST00000438518 TBC1D24Q9ULP9 559 aa14.8□□□□□ -0.04
HDAC6-208ENST00000438518 WASHC3Q9Y3C0 194 aa14.8□□□□□ -0.04
HDAC6-208ENST00000438518 SOX21Q9Y651 276 aaPredicted RBP14.8□□□□□ -0.04
HDAC6-208ENST00000438518 H0YJW9 148 aa14.79□□□□□ -0.04
HDAC6-208ENST00000438518 H3BUX3 64 aa14.79□□□□□ -0.04
HDAC6-208ENST00000438518 NDUFB6O95139 128 aa14.79□□□□□ -0.04
HDAC6-208ENST00000438518 IFNA2P01563 188 aa14.79□□□□□ -0.04
HDAC6-208ENST00000438518 SLC6A1P30531 599 aa14.79□□□□□ -0.04
HDAC6-208ENST00000438518 BTCP35070 178 aa14.79□□□□□ -0.04
HDAC6-208ENST00000438518 IFITM3Q01628 133 aa14.79□□□□□ -0.04
HDAC6-208ENST00000438518 BAMBIQ13145 260 aa14.79□□□□□ -0.04
HDAC6-208ENST00000438518 RTL8BQ17RB0 113 aa14.79□□□□□ -0.04
HDAC6-208ENST00000438518 C11orf88Q6PI97 169 aa14.79□□□□□ -0.04
HDAC6-208ENST00000438518 C16orf82Q7Z2V1 217 aa14.79□□□□□ -0.04
HDAC6-208ENST00000438518 ZNF383Q8NA42 475 aa14.79□□□□□ -0.04
HDAC6-208ENST00000438518 POC5Q8NA72 575 aa14.79□□□□□ -0.04
HDAC6-208ENST00000438518 OR2T10Q8NGZ9 312 aa14.79□□□□□ -0.04
HDAC6-208ENST00000438518 CAPSLQ8WWF8 208 aa14.79□□□□□ -0.04
HDAC6-208ENST00000438518 DDB2Q92466 427 aa14.79□□□□□ -0.04
HDAC6-208ENST00000438518 VPREB3Q9UKI3 123 aa14.79□□□□□ -0.04
HDAC6-208ENST00000438518 TCF19Q9Y242 345 aa14.79□□□□□ -0.04
HDAC6-208ENST00000438518 RBFOX2O43251 390 aaKnown RBP eCLIP14.78□□□□□ -0.04
HDAC6-208ENST00000438518 TCF21O43680 179 aa14.78□□□□□ -0.04
HDAC6-208ENST00000438518 PGLYRP1O75594 196 aaPredicted RBP14.78□□□□□ -0.04
HDAC6-208ENST00000438518 PIGPP57054 158 aa14.78□□□□□ -0.04
HDAC6-208ENST00000438518 DCTN2Q13561 401 aaKnown RBP14.78□□□□□ -0.04
HDAC6-208ENST00000438518 OR8H1Q8NGG4 311 aa14.78□□□□□ -0.04
HDAC6-208ENST00000438518 PIFOQ8TCI5 191 aa14.78□□□□□ -0.04
HDAC6-208ENST00000438518 TCTEX1D2Q8WW35 142 aa14.78□□□□□ -0.04
HDAC6-208ENST00000438518 C5orf66Q9H5L9 145 aa14.78□□□□□ -0.04
HDAC6-208ENST00000438518 RAB18Q9NP72 206 aa14.78□□□□□ -0.04
HDAC6-208ENST00000438518 SLC35D1Q9NTN3 355 aa14.78□□□□□ -0.04
HDAC6-208ENST00000438518 SONP18583 2426 aaKnown RBP14.78□□□□□ -0.04
HDAC6-208ENST00000438518 FAM240BA0A1B0GVZ2 78 aa14.77□□□□□ -0.05
HDAC6-208ENST00000438518 LINC00473A8K010 186 aa14.77□□□□□ -0.05
HDAC6-208ENST00000438518 H7C2Y5 167 aa14.77□□□□□ -0.05
HDAC6-208ENST00000438518 HOXA3O43365 443 aaPredicted RBP14.77□□□□□ -0.05
HDAC6-208ENST00000438518 VENTXO95231 258 aa14.77□□□□□ -0.05
HDAC6-208ENST00000438518 MOSP00540 346 aa14.77□□□□□ -0.05
HDAC6-208ENST00000438518 IGKV1D-33P01593 117 aa14.77□□□□□ -0.05
HDAC6-208ENST00000438518 IGKV1-33P01594 117 aa14.77□□□□□ -0.05
HDAC6-208ENST00000438518 IGHV4-59P01825 116 aa14.77□□□□□ -0.05
HDAC6-208ENST00000438518 RLN1P04808 185 aa14.77□□□□□ -0.05
HDAC6-208ENST00000438518 SNRNP70P08621 437 aaKnown RBP14.77□□□□□ -0.05
HDAC6-208ENST00000438518 F2RP25116 425 aa14.77□□□□□ -0.05
HDAC6-208ENST00000438518 CCR6P51684 374 aa14.77□□□□□ -0.05
HDAC6-208ENST00000438518 TAS2R31P59538 309 aa14.77□□□□□ -0.05
HDAC6-208ENST00000438518 RPL15P61313 204 aaKnown RBP14.77□□□□□ -0.05
HDAC6-208ENST00000438518 PHLDA2Q53GA4 152 aa14.77□□□□□ -0.05
HDAC6-208ENST00000438518 DRAXINQ8NBI3 349 aaPredicted RBP14.77□□□□□ -0.05
HDAC6-208ENST00000438518 OR4C13Q8NGP0 309 aa14.77□□□□□ -0.05
HDAC6-208ENST00000438518 OR4S2Q8NH73 311 aa14.77□□□□□ -0.05
HDAC6-208ENST00000438518 ENKURQ8TC29 256 aa14.77□□□□□ -0.05
HDAC6-208ENST00000438518 MXRA5Q9NR99 2828 aa14.77□□□□□ -0.05
HDAC6-208ENST00000438518 MPPED1O15442 326 aa14.76□□□□□ -0.05
HDAC6-208ENST00000438518 TNFSF12O43508 249 aa14.76□□□□□ -0.05
HDAC6-208ENST00000438518 TMEM11P17152 192 aa14.76□□□□□ -0.05
HDAC6-208ENST00000438518 PAX6P26367 422 aa14.76□□□□□ -0.05
HDAC6-208ENST00000438518 UBE2MP61081 183 aaKnown RBP14.76□□□□□ -0.05
HDAC6-208ENST00000438518 HES1Q14469 280 aa14.76□□□□□ -0.05
HDAC6-208ENST00000438518 GLDNQ6ZMI3 551 aaPredicted RBP14.76□□□□□ -0.05
HDAC6-208ENST00000438518 TBC1D26Q86UD7 250 aa14.76□□□□□ -0.05
HDAC6-208ENST00000438518 OSR1Q8TAX0 266 aaPredicted RBP14.76□□□□□ -0.05
HDAC6-208ENST00000438518 AIFM2Q9BRQ8 373 aa14.76□□□□□ -0.05
HDAC6-208ENST00000438518 RTBDNQ9BSG5 229 aaPredicted RBP14.76□□□□□ -0.05
HDAC6-208ENST00000438518 C1RLQ9NZP8 487 aa14.76□□□□□ -0.05
HDAC6-208ENST00000438518 VSIG4Q9Y279 399 aa14.76□□□□□ -0.05
HDAC6-208ENST00000438518 IGHV3-72A0A0B4J1Y9 119 aa14.75□□□□□ -0.05
HDAC6-208ENST00000438518 PIGBOS1A0A0B4J2F0 54 aa14.75□□□□□ -0.05
HDAC6-208ENST00000438518 A6NDX4 124 aa14.75□□□□□ -0.05
HDAC6-208ENST00000438518 DNAJC9-AS1A6NH13 148 aa14.75□□□□□ -0.05
HDAC6-208ENST00000438518 M0QZK8 103 aa14.75□□□□□ -0.05
HDAC6-208ENST00000438518 RPL30P62888 115 aaKnown RBP14.75□□□□□ -0.05
HDAC6-208ENST00000438518 TMEM177Q53S58 311 aa14.75□□□□□ -0.05
HDAC6-208ENST00000438518 TMEM128Q5BJH2 165 aa14.75□□□□□ -0.05
HDAC6-208ENST00000438518 SGPP2Q8IWX5 399 aa14.75□□□□□ -0.05
HDAC6-208ENST00000438518 CENPSQ8N2Z9 138 aa14.75□□□□□ -0.05
HDAC6-208ENST00000438518 DUSP18Q8NEJ0 188 aa14.75□□□□□ -0.05
HDAC6-208ENST00000438518 FLYWCH2Q96CP2 140 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms