RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 FAM90A13PP0C7W8 464 aa7.94□□□□□ -1.14
CUX1-206ENST00000437600 FAM90A14PP0C7W9 464 aa7.94□□□□□ -1.14
CUX1-206ENST00000437600 FAM90A24PP0C7X0 464 aa7.94□□□□□ -1.14
CUX1-206ENST00000437600 AGAP20933 346 aa7.94□□□□□ -1.14
CUX1-206ENST00000437600 AWAT1Q58HT5 328 aa7.94□□□□□ -1.14
CUX1-206ENST00000437600 LCN15Q6UWW0 184 aa7.94□□□□□ -1.14
CUX1-206ENST00000437600 ZNF497Q6ZNH5 498 aa7.94□□□□□ -1.14
CUX1-206ENST00000437600 FGFRL1Q8N441 504 aa7.94□□□□□ -1.14
CUX1-206ENST00000437600 FAM24BQ8N5W8 94 aa7.94□□□□□ -1.14
CUX1-206ENST00000437600 LEAP2Q969E1 77 aa7.94□□□□□ -1.14
CUX1-206ENST00000437600 OR2D2Q9H210 308 aa7.94□□□□□ -1.14
CUX1-206ENST00000437600 PLSCR4Q9NRQ2 329 aa7.94□□□□□ -1.14
CUX1-206ENST00000437600 URGCP-MRPS24S4R325 110 aa7.94□□□□□ -1.14
CUX1-206ENST00000437600 IGHV1-18A0A0C4DH31 117 aa7.94□□□□□ -1.14
CUX1-206ENST00000437600 A0A1W2PPE2 198 aa7.94□□□□□ -1.14
CUX1-206ENST00000437600 C7orf77A4D0Y5 90 aa7.94□□□□□ -1.14
CUX1-206ENST00000437600 NUDT19A8MXV4 375 aa7.94□□□□□ -1.14
CUX1-206ENST00000437600 M0R1B8 84 aa7.94□□□□□ -1.14
CUX1-206ENST00000437600 CGAP01215 116 aa7.94□□□□□ -1.14
CUX1-206ENST00000437600 COX5AP20674 150 aa7.94□□□□□ -1.14
CUX1-206ENST00000437600 IL2RGP31785 369 aa7.94□□□□□ -1.14
CUX1-206ENST00000437600 RAB4BP61018 213 aa7.94□□□□□ -1.14
CUX1-206ENST00000437600 ERVK11-1P61568 191 aa7.94□□□□□ -1.14
CUX1-206ENST00000437600 BHLHA15Q7RTS1 189 aaPredicted RBP7.94□□□□□ -1.14
CUX1-206ENST00000437600 ZCCHC24Q8N2G6 241 aaKnown RBP7.94□□□□□ -1.14
CUX1-206ENST00000437600 ZNRF1Q8ND25 227 aa7.94□□□□□ -1.14
CUX1-206ENST00000437600 TMPRSS5Q9H3S3 457 aa7.94□□□□□ -1.14
CUX1-206ENST00000437600 PLK3Q9H4B4 646 aa7.94□□□□□ -1.14
CUX1-206ENST00000437600 C11orf1Q9H5F2 150 aa7.94□□□□□ -1.14
CUX1-206ENST00000437600 YLPM1P49750 1951 aaKnown RBP7.93□□□□□ -1.14
CUX1-206ENST00000437600 LRP5LA4QPB2 252 aa7.93□□□□□ -1.14
CUX1-206ENST00000437600 IGKV3-15P01624 115 aa7.93□□□□□ -1.14
CUX1-206ENST00000437600 MT-ND4LP03901 98 aa7.93□□□□□ -1.14
CUX1-206ENST00000437600 CTXN2P0C2S0 81 aa7.93□□□□□ -1.14
CUX1-206ENST00000437600 PGA5P0DJD9 388 aa7.93□□□□□ -1.14
CUX1-206ENST00000437600 UCNP55089 124 aa7.93□□□□□ -1.14
CUX1-206ENST00000437600 ERVFRD-1P60508 538 aa7.93□□□□□ -1.14
CUX1-206ENST00000437600 CDPF1Q6NVV7 123 aa7.93□□□□□ -1.14
CUX1-206ENST00000437600 VKORC1L1Q8N0U8 176 aa7.93□□□□□ -1.14
CUX1-206ENST00000437600 DEFB108BQ8NET1 73 aa7.93□□□□□ -1.14
CUX1-206ENST00000437600 C5orf30Q96GV9 206 aa7.93□□□□□ -1.14
CUX1-206ENST00000437600 EGLN1Q9GZT9 426 aa7.93□□□□□ -1.14
CUX1-206ENST00000437600 ARV1Q9H2C2 271 aa7.93□□□□□ -1.14
CUX1-206ENST00000437600 H0Y980 276 aa7.93□□□□□ -1.14
CUX1-206ENST00000437600 IGHV2-5P01817 119 aa7.93□□□□□ -1.14
CUX1-206ENST00000437600 C1orf185Q5T7R7 199 aa7.93□□□□□ -1.14
CUX1-206ENST00000437600 TGIF2LYQ8IUE0 185 aa7.93□□□□□ -1.14
CUX1-206ENST00000437600 OR13A1Q8NGR1 328 aa7.93□□□□□ -1.14
CUX1-206ENST00000437600 KCNJ16Q9NPI9 418 aa7.93□□□□□ -1.14
CUX1-206ENST00000437600 MBD3L4A6NDZ8 208 aaPredicted RBP7.92□□□□□ -1.14
CUX1-206ENST00000437600 MBD3L3A6NE82 208 aaPredicted RBP7.92□□□□□ -1.14
CUX1-206ENST00000437600 MBD3L5A6NJ08 208 aaPredicted RBP7.92□□□□□ -1.14
CUX1-206ENST00000437600 C17orf98A8MV24 154 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 AP4M1O00189 453 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 YIF1AO95070 293 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 HBZP02008 142 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 ELLP55199 621 aaPredicted RBP7.92□□□□□ -1.14
CUX1-206ENST00000437600 RND3P61587 244 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 COL10A1Q03692 680 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 SPSB3Q6PJ21 355 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 WDR82Q6UXN9 313 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 FAM185AQ8N0U4 392 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 ZNF383Q8NA42 475 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 OR5D13Q8NGL4 314 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 MBD3L2Q8NHZ7 208 aaPredicted RBP7.92□□□□□ -1.14
CUX1-206ENST00000437600 ZDHHC16Q969W1 377 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 COQ2Q96H96 371 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 PKIBQ9C010 78 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 TOLLIPQ9H0E2 274 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 PSENENQ9NZ42 101 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 CLN8Q9UBY8 286 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 LRRK2Q5S007 2527 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 IGHV2OR16-5A0A0B4J2B6 119 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 ZFP92A6NM28 416 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 K7N7A8 449 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 SPRY3O43610 288 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 RAB5AP20339 215 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 Q6ZS49 121 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 OR8G5Q8NG78 346 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 LYPD6BQ8NI32 183 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 MEGF10Q96KG7 1140 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 SPIN2AQ99865 258 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 SPIN2BQ9BPZ2 258 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 PSG11Q9UQ72 335 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 POLDIP2Q9Y2S7 368 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 ANKHD1Q8IWZ3 2542 aaKnown RBP7.92□□□□□ -1.14
CUX1-206ENST00000437600 MARCH11A6NNE9 402 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 SYNGR2O43760 224 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 CIDEAO60543 219 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 CRYABP02511 175 aaKnown RBP7.92□□□□□ -1.14
CUX1-206ENST00000437600 BRWD1-AS2P59051 145 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 DUX4L9Q6RFH8 374 aaPredicted RBP7.92□□□□□ -1.14
CUX1-206ENST00000437600 GFRALQ6UXV0 394 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 SSX7Q7RTT5 188 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 HAPLN4Q86UW8 402 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 GALMQ96C23 342 aa7.92□□□□□ -1.14
CUX1-206ENST00000437600 PPIHO43447 177 aaKnown RBP7.91□□□□□ -1.14
CUX1-206ENST00000437600 CLDN1O95832 211 aa7.91□□□□□ -1.14
CUX1-206ENST00000437600 EGR1P18146 543 aa7.91□□□□□ -1.14
CUX1-206ENST00000437600 S100GP29377 79 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms