RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 OR1I1O60431 355 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 STX10O60499 249 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 CD8AP01732 235 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 MBP02144 154 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 UQCRHP07919 91 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 STAG3L2P0CL84 134 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 CCL3P10147 92 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 GZMAP12544 262 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 HLA-DMAP28067 261 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 MIPP30301 263 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 HTR2BP41595 481 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 ATP5J2P56134 94 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 RBX1P62877 108 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 XIAPP98170 497 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 MYL5Q02045 173 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 ATP5G2Q06055 141 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 MEF2CQ06413 473 aaPredicted RBP1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 IL15RAQ13261 267 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 FAM53BQ14153 422 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 TMEM249Q2WGJ8 235 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 TBPL2Q6SJ96 375 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 ASCL4Q6XD76 172 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 BRD3OSQ6XYD6 125 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 DGAT2L6Q6ZPD8 337 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 TRMT10CQ7L0Y3 403 aaKnown RBP1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 VN1R4Q7Z5H5 301 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 SLC13A5Q86YT5 568 aaPredicted RBP1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 KRT222Q8N1A0 295 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 ZCCHC24Q8N2G6 241 aaKnown RBP1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 ATPAF2Q8N5M1 289 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 ZFP62Q8NB50 900 aaPredicted RBP1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 TMEM35BQ8NCS4 154 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 OR52K1Q8NGK4 314 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 OR13C9Q8NGT0 318 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 OR51A7Q8NH64 312 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 NT5CQ8TCD5 201 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 MITD1Q8WV92 249 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 NELFBQ8WX92 580 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 ANP32BQ92688 251 aaKnown RBP1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 RNASE6Q93091 150 aaKnown RBP1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 HGDQ93099 445 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 CENPNQ96H22 339 aaPredicted RBP1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 LYSMD1Q96S90 227 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 SELENOSQ9BQE4 189 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 SEC22CQ9BRL7 303 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 UTP23Q9BRU9 249 aaKnown RBP1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 TSGA10Q9BZW7 698 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 LRTM1Q9HBL6 345 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 TMEM100Q9NV29 134 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 RBM22Q9NW64 420 aaKnown RBP eCLIP1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 RMND1Q9NWS8 449 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 STX18Q9P2W9 335 aaKnown RBP1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 FLVCR2Q9UPI3 526 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 SOX21Q9Y651 276 aaPredicted RBP1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 KPTNQ9Y664 436 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 ARL5AQ9Y689 179 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 ENPP4Q9Y6X5 453 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 HECTD4Q9Y4D8 3996 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 ALMS1Q8TCU4 4167 aa1.37□□□□□ -2.19
HMGB1P31-201ENST00000437242 IGKV2-24A0A0C4DH68 120 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 IGKV1-6A0A0C4DH72 117 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 VGLL3A8MV65 326 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 SEC14L6B5MCN3 397 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 GOLGA6L19H0YKK7 550 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 CLDN34H7C241 214 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 UPK1AO00322 258 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 ATP8B1O43520 1251 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 NDUFS5O43920 106 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 GMDSO60547 372 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 OR2J2O76002 312 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 FSTL3O95633 263 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 IGKV1-39P01597 117 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 IGKV1D-39P04432 117 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 PFN1P07737 140 aaKnown RBP1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 PAX6P26367 422 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 OPRM1P35372 400 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 ARR3P36575 388 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 COILP38432 576 aaPredicted RBP1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 RGS6P49758 472 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 NUDT2P50583 147 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 ZNF140P52738 457 aaPredicted RBP1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 HADHBP55084 474 aaKnown RBP1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 OR12D2P58182 307 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 RPL31P62899 125 aaKnown RBP1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 BIKQ13323 160 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 HERC1Q15751 4861 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 TTC32Q5I0X7 151 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 TMEM69Q5SWH9 247 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 IDNKQ5T6J7 187 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 FAM27D1Q5T7N8 215 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 SYT6Q5T7P8 510 aaPredicted RBP1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 ARFGEF3Q5TH69 2177 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 DUPD1Q68J44 220 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 MTERF4Q7Z6M4 381 aaKnown RBP1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 DAZ4Q86SG3 579 aaKnown RBP1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 PDPNQ86YL7 162 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 CA13Q8N1Q1 262 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 OR4K2Q8NGD2 314 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 OR8A1Q8NGG7 326 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 ZNF420Q8TAQ5 688 aaPredicted RBP1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms