RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 USMG5Q96IX5 58 aa11.13□□□□□ -0.63
HDAC8-213ENST00000436675 KCNK15Q9H427 330 aa11.13□□□□□ -0.63
HDAC8-213ENST00000436675 SLC35D1Q9NTN3 355 aa11.13□□□□□ -0.63
HDAC8-213ENST00000436675 ZNF221Q9UK13 617 aa11.13□□□□□ -0.63
HDAC8-213ENST00000436675 NUPR2A6NF83 97 aa11.12□□□□□ -0.63
HDAC8-213ENST00000436675 M0R1X1 148 aa11.12□□□□□ -0.63
HDAC8-213ENST00000436675 DYNC1I1O14576 645 aa11.12□□□□□ -0.63
HDAC8-213ENST00000436675 AIREO43918 545 aa11.12□□□□□ -0.63
HDAC8-213ENST00000436675 IGLV2-23P01705 113 aa11.12□□□□□ -0.63
HDAC8-213ENST00000436675 EXOSC2Q13868 293 aaKnown RBP11.12□□□□□ -0.63
HDAC8-213ENST00000436675 YIF1BQ5BJH7 314 aa11.12□□□□□ -0.63
HDAC8-213ENST00000436675 ZNF880Q6PDB4 577 aa11.12□□□□□ -0.63
HDAC8-213ENST00000436675 CEMP1Q6PRD7 247 aaPredicted RBP11.12□□□□□ -0.63
HDAC8-213ENST00000436675 EDARADDQ8WWZ3 215 aa11.12□□□□□ -0.63
HDAC8-213ENST00000436675 NICN1Q9BSH3 213 aa11.12□□□□□ -0.63
HDAC8-213ENST00000436675 HDHD3Q9BSH5 251 aaPredicted RBP11.12□□□□□ -0.63
HDAC8-213ENST00000436675 MSGN1A6NI15 193 aa11.11□□□□□ -0.63
HDAC8-213ENST00000436675 NAPSAO96009 420 aa11.11□□□□□ -0.63
HDAC8-213ENST00000436675 HLA-AP01891 365 aaKnown RBP11.11□□□□□ -0.63
HDAC8-213ENST00000436675 FOLR2P14207 255 aa11.11□□□□□ -0.63
HDAC8-213ENST00000436675 HTR2CP28335 458 aa11.11□□□□□ -0.63
HDAC8-213ENST00000436675 RHOGP84095 191 aa11.11□□□□□ -0.63
HDAC8-213ENST00000436675 CDH26Q8IXH8 852 aa11.11□□□□□ -0.63
HDAC8-213ENST00000436675 PGLYRP3Q96LB9 341 aa11.11□□□□□ -0.63
HDAC8-213ENST00000436675 TMEM68Q96MH6 324 aa11.11□□□□□ -0.63
HDAC8-213ENST00000436675 GGTLC1Q9BX51 225 aa11.11□□□□□ -0.63
HDAC8-213ENST00000436675 AKIP1Q9NQ31 210 aa11.11□□□□□ -0.63
HDAC8-213ENST00000436675 LOC100130705A0A1B0GUX0 176 aa11.1□□□□□ -0.63
HDAC8-213ENST00000436675 C2orf70A6NJV1 201 aa11.1□□□□□ -0.63
HDAC8-213ENST00000436675 PPP5D1E7EU14 171 aa11.1□□□□□ -0.63
HDAC8-213ENST00000436675 ITGB1BP1O14713 200 aa11.1□□□□□ -0.63
HDAC8-213ENST00000436675 MPPED1O15442 326 aa11.1□□□□□ -0.63
HDAC8-213ENST00000436675 CIB2O75838 187 aa11.1□□□□□ -0.63
HDAC8-213ENST00000436675 CRYGBP07316 175 aa11.1□□□□□ -0.63
HDAC8-213ENST00000436675 SCTP09683 121 aa11.1□□□□□ -0.63
HDAC8-213ENST00000436675 ZBTB25P24278 435 aa11.1□□□□□ -0.63
HDAC8-213ENST00000436675 DCKP27707 260 aa11.1□□□□□ -0.63
HDAC8-213ENST00000436675 KIR2DS2P43631 304 aa11.1□□□□□ -0.63
HDAC8-213ENST00000436675 ATP5G2Q06055 141 aa11.1□□□□□ -0.63
HDAC8-213ENST00000436675 SLC16A13Q7RTY0 426 aa11.1□□□□□ -0.63
HDAC8-213ENST00000436675 ADAD2Q8NCV1 583 aaKnown RBP11.1□□□□□ -0.63
HDAC8-213ENST00000436675 CACNG8Q8WXS5 425 aa11.1□□□□□ -0.63
HDAC8-213ENST00000436675 HARBI1Q96MB7 349 aa11.1□□□□□ -0.63
HDAC8-213ENST00000436675 DERL3Q96Q80 235 aa11.1□□□□□ -0.63
HDAC8-213ENST00000436675 SLC29A1Q99808 456 aa11.1□□□□□ -0.63
HDAC8-213ENST00000436675 ZNF230Q9UIE0 474 aaPredicted RBP11.1□□□□□ -0.63
HDAC8-213ENST00000436675 LOC102724200A0A096LPH7 203 aaPredicted RBP11.09□□□□□ -0.63
HDAC8-213ENST00000436675 WBP4O75554 376 aaKnown RBP11.09□□□□□ -0.63
HDAC8-213ENST00000436675 OR9G9P0C7N8 305 aa11.09□□□□□ -0.63
HDAC8-213ENST00000436675 MYL12AP19105 171 aa11.09□□□□□ -0.63
HDAC8-213ENST00000436675 RPS27AP62979 156 aaKnown RBP11.09□□□□□ -0.63
HDAC8-213ENST00000436675 HLA-DRB3P79483 266 aa11.09□□□□□ -0.63
HDAC8-213ENST00000436675 TNXAQ16473 311 aa11.09□□□□□ -0.63
HDAC8-213ENST00000436675 MOB1BQ7L9L4 216 aa11.09□□□□□ -0.63
HDAC8-213ENST00000436675 LYG2Q86SG7 212 aa11.09□□□□□ -0.63
HDAC8-213ENST00000436675 KCNG3Q8TAE7 436 aa11.09□□□□□ -0.63
HDAC8-213ENST00000436675 KCTD12Q96CX2 325 aaKnown RBP11.09□□□□□ -0.63
HDAC8-213ENST00000436675 UQCC2Q9BRT2 126 aa11.09□□□□□ -0.63
HDAC8-213ENST00000436675 TMEM59Q9BXS4 323 aa11.09□□□□□ -0.63
HDAC8-213ENST00000436675 ZC4H2Q9NQZ6 224 aa11.09□□□□□ -0.63
HDAC8-213ENST00000436675 AK3Q9UIJ7 227 aa11.09□□□□□ -0.63
HDAC8-213ENST00000436675 EXOSC1Q9Y3B2 195 aaKnown RBP11.09□□□□□ -0.63
HDAC8-213ENST00000436675 VPS13DQ5THJ4 4388 aa11.09□□□□□ -0.63
HDAC8-213ENST00000436675 SRRM4A7MD48 611 aaKnown RBP11.08□□□□□ -0.64
HDAC8-213ENST00000436675 SHOXO15266 292 aa11.08□□□□□ -0.64
HDAC8-213ENST00000436675 TUSC2O75896 110 aa11.08□□□□□ -0.64
HDAC8-213ENST00000436675 SCAF4O95104 1147 aaKnown RBP11.08□□□□□ -0.64
HDAC8-213ENST00000436675 OR2C1O95371 312 aa11.08□□□□□ -0.64
HDAC8-213ENST00000436675 ZNF45Q02386 682 aa11.08□□□□□ -0.64
HDAC8-213ENST00000436675 MRGPRG-AS1Q2M3A8 158 aa11.08□□□□□ -0.64
HDAC8-213ENST00000436675 IDO2Q6ZQW0 420 aa11.08□□□□□ -0.64
HDAC8-213ENST00000436675 NKAIN3Q8N8D7 197 aa11.08□□□□□ -0.64
HDAC8-213ENST00000436675 OR52B4Q8NGK2 314 aa11.08□□□□□ -0.64
HDAC8-213ENST00000436675 THRSPQ92748 146 aa11.08□□□□□ -0.64
HDAC8-213ENST00000436675 PLEKHJ1Q9NW61 149 aa11.08□□□□□ -0.64
HDAC8-213ENST00000436675 GHRLQ9UBU3 117 aa11.08□□□□□ -0.64
HDAC8-213ENST00000436675 KLK5Q9Y337 293 aaPredicted RBP11.08□□□□□ -0.64
HDAC8-213ENST00000436675 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.07□□□□□ -0.64
HDAC8-213ENST00000436675 A0A0A6YYD4 124 aa11.07□□□□□ -0.64
HDAC8-213ENST00000436675 OR2J3O76001 311 aa11.07□□□□□ -0.64
HDAC8-213ENST00000436675 TMEM61Q8N0U2 210 aa11.07□□□□□ -0.64
HDAC8-213ENST00000436675 SRSF12Q8WXF0 261 aaKnown RBP11.07□□□□□ -0.64
HDAC8-213ENST00000436675 ACOT12Q8WYK0 555 aa11.07□□□□□ -0.64
HDAC8-213ENST00000436675 GGHQ92820 318 aa11.07□□□□□ -0.64
HDAC8-213ENST00000436675 PTX4Q96A99 478 aa11.07□□□□□ -0.64
HDAC8-213ENST00000436675 RDH8Q9NYR8 311 aa11.07□□□□□ -0.64
HDAC8-213ENST00000436675 TECRQ9NZ01 308 aaKnown RBP11.07□□□□□ -0.64
HDAC8-213ENST00000436675 DIMT1Q9UNQ2 313 aaKnown RBP11.07□□□□□ -0.64
HDAC8-213ENST00000436675 IGKV1-6A0A0C4DH72 117 aa11.06□□□□□ -0.64
HDAC8-213ENST00000436675 FAM223BA6NKX1 122 aa11.06□□□□□ -0.64
HDAC8-213ENST00000436675 SOCS1O15524 211 aa11.06□□□□□ -0.64
HDAC8-213ENST00000436675 IGHV3-23P01764 117 aa11.06□□□□□ -0.64
HDAC8-213ENST00000436675 CD3GP09693 182 aa11.06□□□□□ -0.64
HDAC8-213ENST00000436675 UBBP0CG47 229 aa11.06□□□□□ -0.64
HDAC8-213ENST00000436675 RASSF2P50749 326 aa11.06□□□□□ -0.64
HDAC8-213ENST00000436675 TAGLNQ01995 201 aaKnown RBP11.06□□□□□ -0.64
HDAC8-213ENST00000436675 UNC119Q13432 240 aa11.06□□□□□ -0.64
HDAC8-213ENST00000436675 INSL4Q14641 139 aa11.06□□□□□ -0.64
HDAC8-213ENST00000436675 DEFB135Q30KP9 77 aa11.06□□□□□ -0.64
HDAC8-213ENST00000436675 FAM223AQ8IWN6 122 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms