RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 SNAI3Q3KNW1 292 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 HAPLN4Q86UW8 402 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 WFDC8Q8IUA0 241 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 OR4B1Q8NGF8 309 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 OR10G9Q8NGN4 311 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 OR10G7Q8NGN6 311 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 IGKV1-12A0A0C4DH73 117 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 FBLL1A6NHQ2 334 aaKnown RBP6.37□□□□□ -1.39
CPSF6-202ENST00000435070 RBFOX2O43251 390 aaKnown RBP eCLIP6.37□□□□□ -1.398e-10■□□□□ 10.6
CPSF6-202ENST00000435070 CLDN1O95832 211 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 IGKV1D-12P01611 117 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 PSG2P11465 335 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 C1orf174Q8IYL3 243 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 FAM169BQ8N8A8 192 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 SSC4DQ8WTU2 575 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 SFRP2Q96HF1 295 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 SLC45A2Q9UMX9 530 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 TMEM238C9JI98 176 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 PATE4P0C8F1 98 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 CD38P28907 300 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 LINC01551Q86U37 167 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 WDR5BQ86VZ2 330 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 ELOVL5Q9NYP7 299 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 KIAA1549Q9HCM3 1950 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 TRAV39A0A0B4J263 110 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 SNURFLB1AK76 121 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 SYNGR2O43760 224 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 CNIH1O95406 144 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 IGHMP01871 453 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 WNT2P09544 360 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 CDC34P49427 236 aaPredicted RBP6.37□□□□□ -1.39
CPSF6-202ENST00000435070 RELBQ01201 579 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 LHX8Q68G74 356 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 WDR73Q6P4I2 378 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 TAF15Q92804 592 aaKnown RBP eCLIP6.37□□□□□ -1.39
CPSF6-202ENST00000435070 FGF14Q92915 247 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 RNF2Q99496 336 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 RPP25Q9BUL9 199 aaKnown RBP6.37□□□□□ -1.39
CPSF6-202ENST00000435070 HES7Q9BYE0 225 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 NRN1Q9NPD7 142 aa6.37□□□□□ -1.39
CPSF6-202ENST00000435070 FRG2CA6NGY1 282 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 TMEM250H0YL14 139 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 ZFAND5O76080 213 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 ZP4Q12836 540 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 ZNF295-AS1Q8N0V1 137 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 OSR2Q8N2R0 312 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 TMEM56Q96MV1 263 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 TMEM56-RWDD3S4R434 201 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 GOSR1O95249 250 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 HBG1P69891 147 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 HBG2P69892 147 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 LCN2P80188 198 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 MRPL52Q86TS9 123 aaKnown RBP6.36□□□□□ -1.39
CPSF6-202ENST00000435070 WDR61Q9GZS3 305 aaKnown RBP6.36□□□□□ -1.39
CPSF6-202ENST00000435070 PNRC2Q9NPJ4 139 aaKnown RBP6.36□□□□□ -1.39
CPSF6-202ENST00000435070 DUSP13Q9UII6 198 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 IGHV2OR16-5A0A0B4J2B6 119 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 M0R135 149 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 PCBD1P61457 104 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 ZXDAP98168 799 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 SLC38A11Q08AI6 406 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 AGBL5Q8NDL9 886 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 BCL2L2Q92843 193 aaPredicted RBP6.36□□□□□ -1.39
CPSF6-202ENST00000435070 ZNF799Q96GE5 643 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 CST9LQ9H4G1 147 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 ATP23Q9Y6H3 246 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 ADAMTS9Q9P2N4 1935 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 K7EP13 123 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 OR2J3O76001 311 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 GRPP07492 148 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 PPOXP50336 477 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 PSG4Q00888 419 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 LRRC75BQ2VPJ9 315 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 PP6455Q8WZ26 134 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 OR2D2Q9H210 308 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 HSBP1O75506 76 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 EN2P19622 333 aaPredicted RBP6.36□□□□□ -1.39
CPSF6-202ENST00000435070 LHX2P50458 406 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 EDDM3BP56851 147 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 KRTCAP3Q53RY4 240 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 TMEM97Q5BJF2 176 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 SPINK9Q5DT21 86 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 OR4A47Q6IF82 309 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 GCNT2Q8N0V5 402 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 MRGPRDQ8TDS7 321 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 FER1L6-AS2Q96M78 137 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 DOCK7Q96N67 2140 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 AGMATQ9BSE5 352 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 ULBP2Q9BZM5 246 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 GSX1Q9H4S2 264 aaPredicted RBP6.36□□□□□ -1.39
CPSF6-202ENST00000435070 ZNF835Q9Y2P0 537 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 CFAP54Q96N23 3096 aa6.36□□□□□ -1.39
CPSF6-202ENST00000435070 TCL1AP56279 114 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 IGLV3-21P80748 117 aaPredicted RBP6.35□□□□□ -1.39
CPSF6-202ENST00000435070 SERF2P84101 59 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 OCIAD2Q56VL3 154 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 GCSAMLQ5JQS6 135 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 PRR31Q5SQ13 230 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 PINX1Q96BK5 328 aaKnown RBP6.35□□□□□ -1.39
CPSF6-202ENST00000435070 LAMA1P25391 3075 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms