RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 DTD1Q8TEA8 209 aa15.49■□□□□ 0.07
CLK1-205ENST00000434813 CIB3Q96Q77 187 aaPredicted RBP15.49■□□□□ 0.07
CLK1-205ENST00000434813 TMEM147Q9BVK8 224 aa15.49■□□□□ 0.07
CLK1-205ENST00000434813 CLN8Q9UBY8 286 aa15.49■□□□□ 0.07
CLK1-205ENST00000434813 WASF3Q9UPY6 502 aa15.49■□□□□ 0.07
CLK1-205ENST00000434813 PSG11Q9UQ72 335 aa15.49■□□□□ 0.07
CLK1-205ENST00000434813 IGKV1D-17A0A075B6S4 117 aa15.48■□□□□ 0.07
CLK1-205ENST00000434813 TAGLN2P37802 199 aaKnown RBP15.48■□□□□ 0.07
CLK1-205ENST00000434813 EDDM3AQ14507 147 aa15.48■□□□□ 0.07
CLK1-205ENST00000434813 TIMM23BQ5SRD1 257 aa15.48■□□□□ 0.07
CLK1-205ENST00000434813 H2BFWTQ7Z2G1 175 aa15.48■□□□□ 0.07
CLK1-205ENST00000434813 RFESDQ8TAC1 157 aa15.48■□□□□ 0.07
CLK1-205ENST00000434813 EDARADDQ8WWZ3 215 aa15.48■□□□□ 0.07
CLK1-205ENST00000434813 ZFP92A6NM28 416 aa15.48■□□□□ 0.07
CLK1-205ENST00000434813 PMS2P5A8MQ11 134 aa15.48■□□□□ 0.07
CLK1-205ENST00000434813 UBE2CO00762 179 aa15.48■□□□□ 0.07
CLK1-205ENST00000434813 S100A6P06703 90 aa15.48■□□□□ 0.07
CLK1-205ENST00000434813 FAM90A2PQ658T7 463 aa15.48■□□□□ 0.07
CLK1-205ENST00000434813 HEPN1Q6WQI6 88 aa15.48■□□□□ 0.07
CLK1-205ENST00000434813 C12orf57Q99622 126 aa15.48■□□□□ 0.07
CLK1-205ENST00000434813 DCTN5Q9BTE1 182 aa15.48■□□□□ 0.07
CLK1-205ENST00000434813 JPT1Q9UK76 154 aa15.48■□□□□ 0.07
CLK1-205ENST00000434813 PRR14LQ5THK1 2151 aa15.48■□□□□ 0.07
CLK1-205ENST00000434813 BOD1L1Q8NFC6 3051 aa15.47■□□□□ 0.07
CLK1-205ENST00000434813 MAP1LC3B2A6NCE7 125 aa15.47■□□□□ 0.07
CLK1-205ENST00000434813 IGHV3-13P01766 116 aa15.47■□□□□ 0.07
CLK1-205ENST00000434813 ZNF83P51522 516 aa15.47■□□□□ 0.07
CLK1-205ENST00000434813 ELLP55199 621 aaPredicted RBP15.47■□□□□ 0.07
CLK1-205ENST00000434813 PMS2P11Q13670 270 aa15.47■□□□□ 0.07
CLK1-205ENST00000434813 C3orf36Q3SXR2 165 aa15.47■□□□□ 0.07
CLK1-205ENST00000434813 LRP11Q86VZ4 500 aa15.47■□□□□ 0.07
CLK1-205ENST00000434813 C1QL4Q86Z23 238 aa15.47■□□□□ 0.07
CLK1-205ENST00000434813 SNX22Q96L94 193 aa15.47■□□□□ 0.07
CLK1-205ENST00000434813 P2RX4Q99571 388 aa15.47■□□□□ 0.07
CLK1-205ENST00000434813 MAP1LC3BQ9GZQ8 125 aa15.47■□□□□ 0.07
CLK1-205ENST00000434813 SIRT7Q9NRC8 400 aa15.47■□□□□ 0.07
CLK1-205ENST00000434813 DUSP13Q9UII6 198 aa15.47■□□□□ 0.07
CLK1-205ENST00000434813 SPENQ96T58 3664 aaKnown RBP15.47■□□□□ 0.07
CLK1-205ENST00000434813 MARCH11A6NNE9 402 aa15.46■□□□□ 0.07
CLK1-205ENST00000434813 DEFB108AA8MXU0 73 aa15.46■□□□□ 0.07
CLK1-205ENST00000434813 MGST3O14880 152 aa15.46■□□□□ 0.07
CLK1-205ENST00000434813 ZG16O60844 167 aa15.46■□□□□ 0.07
CLK1-205ENST00000434813 GZMHP20718 246 aa15.46■□□□□ 0.07
CLK1-205ENST00000434813 FGF8P55075 233 aaPredicted RBP15.46■□□□□ 0.07
CLK1-205ENST00000434813 CR1LQ2VPA4 569 aa15.46■□□□□ 0.07
CLK1-205ENST00000434813 ADAM5Q6NVV9 412 aa15.46■□□□□ 0.07
CLK1-205ENST00000434813 GCSAMQ8N6F7 178 aa15.46■□□□□ 0.07
CLK1-205ENST00000434813 PPP1R35Q8TAP8 253 aa15.46■□□□□ 0.07
CLK1-205ENST00000434813 S100PBPQ96BU1 408 aa15.46■□□□□ 0.07
CLK1-205ENST00000434813 FAM215AQ9Y5M1 114 aa15.46■□□□□ 0.07
CLK1-205ENST00000434813 USF3Q68DE3 2245 aa15.46■□□□□ 0.07
CLK1-205ENST00000434813 CXorf65A6NEN9 183 aa15.46■□□□□ 0.07
CLK1-205ENST00000434813 M0R1B8 84 aa15.46■□□□□ 0.07
CLK1-205ENST00000434813 IFNA1P01562 189 aa15.46■□□□□ 0.07
CLK1-205ENST00000434813 CRYABP02511 175 aaKnown RBP15.46■□□□□ 0.07
CLK1-205ENST00000434813 RAB11AP62491 216 aa15.46■□□□□ 0.07
CLK1-205ENST00000434813 ZNF474Q6S9Z5 364 aaPredicted RBP15.46■□□□□ 0.07
CLK1-205ENST00000434813 MRGPRGQ86SM5 289 aa15.46■□□□□ 0.07
CLK1-205ENST00000434813 SPACA3Q8IXA5 215 aa15.46■□□□□ 0.07
CLK1-205ENST00000434813 CA5BP1Q8WTZ4 195 aa15.46■□□□□ 0.07
CLK1-205ENST00000434813 ZDHHC16Q969W1 377 aa15.46■□□□□ 0.07
CLK1-205ENST00000434813 A0A1W2PPE3 182 aa15.45■□□□□ 0.06
CLK1-205ENST00000434813 B4DEV8 164 aa15.45■□□□□ 0.06
CLK1-205ENST00000434813 DUTP33316 252 aaKnown RBP15.45■□□□□ 0.06
CLK1-205ENST00000434813 GPR12P47775 334 aa15.45■□□□□ 0.06
CLK1-205ENST00000434813 MEOX2P50222 304 aa15.45■□□□□ 0.06
CLK1-205ENST00000434813 NKX6-1P78426 367 aaPredicted RBP15.45■□□□□ 0.06
CLK1-205ENST00000434813 VWC2Q2TAL6 325 aa15.45■□□□□ 0.06
CLK1-205ENST00000434813 RBMXL3Q8N7X1 1067 aaKnown RBP15.45■□□□□ 0.06
CLK1-205ENST00000434813 OR10P1Q8NGE3 313 aa15.45■□□□□ 0.06
CLK1-205ENST00000434813 OR2V2Q96R30 315 aa15.45■□□□□ 0.06
CLK1-205ENST00000434813 METTL1Q9UBP6 276 aaKnown RBP15.45■□□□□ 0.06
CLK1-205ENST00000434813 VAX2Q9UIW0 290 aa15.45■□□□□ 0.06
CLK1-205ENST00000434813 EIF3GO75821 320 aaKnown RBP eCLIP15.44■□□□□ 0.06
CLK1-205ENST00000434813 IGKV1D-33P01593 117 aa15.44■□□□□ 0.06
CLK1-205ENST00000434813 IGKV1-33P01594 117 aa15.44■□□□□ 0.06
CLK1-205ENST00000434813 CRYAAP02489 173 aa15.44■□□□□ 0.06
CLK1-205ENST00000434813 GLRXP35754 106 aa15.44■□□□□ 0.06
CLK1-205ENST00000434813 KLF3P57682 345 aaPredicted RBP15.44■□□□□ 0.06
CLK1-205ENST00000434813 PNRC1Q12796 327 aaPredicted RBP15.44■□□□□ 0.06
CLK1-205ENST00000434813 AARDQ4LEZ3 155 aa15.44■□□□□ 0.06
CLK1-205ENST00000434813 C1orf185Q5T7R7 199 aa15.44■□□□□ 0.06
CLK1-205ENST00000434813 RPP25LQ8N5L8 163 aaKnown RBP15.44■□□□□ 0.06
CLK1-205ENST00000434813 MEGF10Q96KG7 1140 aa15.44■□□□□ 0.06
CLK1-205ENST00000434813 GNG12Q9UBI6 72 aa15.44■□□□□ 0.06
CLK1-205ENST00000434813 MGAQ8IWI9 3026 aa15.44■□□□□ 0.06
CLK1-205ENST00000434813 FAM90A9PA6NNJ1 464 aa15.44■□□□□ 0.06
CLK1-205ENST00000434813 ZNF727A8MUV8 499 aa15.44■□□□□ 0.06
CLK1-205ENST00000434813 K7EM74 188 aa15.44■□□□□ 0.06
CLK1-205ENST00000434813 YPEL1O60688 119 aa15.44■□□□□ 0.06
CLK1-205ENST00000434813 IGHV2-5P01817 119 aa15.44■□□□□ 0.06
CLK1-205ENST00000434813 CD55P08174 381 aa15.44■□□□□ 0.06
CLK1-205ENST00000434813 LINC00205P59089 165 aa15.44■□□□□ 0.06
CLK1-205ENST00000434813 OR2B8PP59922 312 aa15.44■□□□□ 0.06
CLK1-205ENST00000434813 MORN2Q502X0 79 aa15.44■□□□□ 0.06
CLK1-205ENST00000434813 NCR3LG1Q68D85 454 aa15.44■□□□□ 0.06
CLK1-205ENST00000434813 ACSM6Q6P461 480 aa15.44■□□□□ 0.06
CLK1-205ENST00000434813 R3HDM4Q96D70 268 aa15.44■□□□□ 0.06
CLK1-205ENST00000434813 YPEL2Q96QA6 119 aa15.44■□□□□ 0.06
CLK1-205ENST00000434813 SSUH2Q9Y2M2 353 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms