RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 TMEM222Q9H0R3 208 aa9.2□□□□□ -0.94
LINC00539-203ENST00000434601 PIPOXQ9P0Z9 390 aa9.2□□□□□ -0.94
LINC00539-203ENST00000434601 DOCK11Q5JSL3 2073 aa9.19□□□□□ -0.94
LINC00539-203ENST00000434601 IGHV2-70DA0A0C4DH43 119 aa9.19□□□□□ -0.94
LINC00539-203ENST00000434601 J3QR06 171 aa9.19□□□□□ -0.94
LINC00539-203ENST00000434601 M0R1X1 148 aa9.19□□□□□ -0.94
LINC00539-203ENST00000434601 RAB29O14966 203 aa9.19□□□□□ -0.94
LINC00539-203ENST00000434601 ADAP1O75689 374 aa9.19□□□□□ -0.94
LINC00539-203ENST00000434601 SIX6O95475 246 aa9.19□□□□□ -0.94
LINC00539-203ENST00000434601 HOXB5P09067 269 aa9.19□□□□□ -0.94
LINC00539-203ENST00000434601 ZNF16P17020 682 aaPredicted RBP9.19□□□□□ -0.94
LINC00539-203ENST00000434601 ZFP36P26651 326 aaKnown RBP9.19□□□□□ -0.94
LINC00539-203ENST00000434601 H2BFSP57053 126 aa9.19□□□□□ -0.94
LINC00539-203ENST00000434601 RAP2BP61225 183 aa9.19□□□□□ -0.94
LINC00539-203ENST00000434601 LCN2P80188 198 aa9.19□□□□□ -0.94
LINC00539-203ENST00000434601 RPL39P5Q59GN2 51 aa9.19□□□□□ -0.94
LINC00539-203ENST00000434601 DCAF12L2Q5VW00 463 aa9.19□□□□□ -0.94
LINC00539-203ENST00000434601 GSG1LQ6UXU4 331 aa9.19□□□□□ -0.94
LINC00539-203ENST00000434601 ODF3L1Q8IXM7 274 aa9.19□□□□□ -0.94
LINC00539-203ENST00000434601 OR9G1Q8NH87 305 aa9.19□□□□□ -0.94
LINC00539-203ENST00000434601 LHFPL5Q8TAF8 219 aa9.19□□□□□ -0.94
LINC00539-203ENST00000434601 TCTEX1D2Q8WW35 142 aa9.19□□□□□ -0.94
LINC00539-203ENST00000434601 IL22RA2Q969J5 263 aa9.19□□□□□ -0.94
LINC00539-203ENST00000434601 TMEM56Q96MV1 263 aa9.19□□□□□ -0.94
LINC00539-203ENST00000434601 CLEC7AQ9BXN2 247 aa9.19□□□□□ -0.94
LINC00539-203ENST00000434601 TMEM56-RWDD3S4R434 201 aa9.19□□□□□ -0.94
LINC00539-203ENST00000434601 IGHV2-26A0A0B4J1V2 119 aa9.18□□□□□ -0.94
LINC00539-203ENST00000434601 PIGBOS1A0A0B4J2F0 54 aa9.18□□□□□ -0.94
LINC00539-203ENST00000434601 DUXBA0A1W2PPF3 345 aa9.18□□□□□ -0.94
LINC00539-203ENST00000434601 C5orf51A6NDU8 294 aa9.18□□□□□ -0.94
LINC00539-203ENST00000434601 FAM25EA8MYX2 175 aa9.18□□□□□ -0.94
LINC00539-203ENST00000434601 HAX1O00165 279 aa9.18□□□□□ -0.94
LINC00539-203ENST00000434601 OR2A4O95047 310 aa9.18□□□□□ -0.94
LINC00539-203ENST00000434601 CDS2O95674 445 aa9.18□□□□□ -0.94
LINC00539-203ENST00000434601 IFNA21P01568 189 aa9.18□□□□□ -0.94
LINC00539-203ENST00000434601 SERPINE2P07093 398 aa9.18□□□□□ -0.94
LINC00539-203ENST00000434601 IL3RAP26951 378 aa9.18□□□□□ -0.94
LINC00539-203ENST00000434601 DUTP33316 252 aaKnown RBP9.18□□□□□ -0.94
LINC00539-203ENST00000434601 ARF6P62330 175 aa9.18□□□□□ -0.94
LINC00539-203ENST00000434601 RPL30P62888 115 aaKnown RBP9.18□□□□□ -0.94
LINC00539-203ENST00000434601 PAX2Q02962 417 aa9.18□□□□□ -0.94
LINC00539-203ENST00000434601 KRTAP24-1Q3LI83 254 aa9.18□□□□□ -0.94
LINC00539-203ENST00000434601 ZFP69Q49AA0 526 aa9.18□□□□□ -0.94
LINC00539-203ENST00000434601 TMEM268Q5VZI3 342 aa9.18□□□□□ -0.94
LINC00539-203ENST00000434601 FAM71F2Q6NXP2 309 aa9.18□□□□□ -0.94
LINC00539-203ENST00000434601 ZNF695Q8IW36 515 aa9.18□□□□□ -0.94
LINC00539-203ENST00000434601 ABHD12Q8N2K0 398 aa9.18□□□□□ -0.94
LINC00539-203ENST00000434601 TCTEX1D1Q8N7M0 179 aa9.18□□□□□ -0.94
LINC00539-203ENST00000434601 Q8N7P7 452 aa9.18□□□□□ -0.94
LINC00539-203ENST00000434601 SLC35G3Q8N808 338 aa9.18□□□□□ -0.94
LINC00539-203ENST00000434601 OR10X1Q8NGY0 326 aa9.18□□□□□ -0.94
LINC00539-203ENST00000434601 TNFRSF14Q92956 283 aa9.18□□□□□ -0.94
LINC00539-203ENST00000434601 RBPMSQ93062 196 aaKnown RBP9.18□□□□□ -0.94
LINC00539-203ENST00000434601 OR2A7Q96R45 310 aa9.18□□□□□ -0.94
LINC00539-203ENST00000434601 S1PR3Q99500 378 aa9.18□□□□□ -0.94
LINC00539-203ENST00000434601 ZNF251Q9BRH9 671 aa9.18□□□□□ -0.94
LINC00539-203ENST00000434601 PDCD10Q9BUL8 212 aa9.18□□□□□ -0.94
LINC00539-203ENST00000434601 METTL8Q9H825 291 aaKnown RBP9.18□□□□□ -0.94
LINC00539-203ENST00000434601 ZNRD1Q9P1U0 126 aa9.18□□□□□ -0.94
LINC00539-203ENST00000434601 POLR3KQ9Y2Y1 108 aaPredicted RBP9.18□□□□□ -0.94
LINC00539-203ENST00000434601 KPTNQ9Y664 436 aa9.18□□□□□ -0.94
LINC00539-203ENST00000434601 LINC00473A8K010 186 aa9.17□□□□□ -0.94
LINC00539-203ENST00000434601 FAM157AC9JC47 383 aa9.17□□□□□ -0.94
LINC00539-203ENST00000434601 SMLR1H3BR10 107 aa9.17□□□□□ -0.94
LINC00539-203ENST00000434601 TOR1AO14656 332 aa9.17□□□□□ -0.94
LINC00539-203ENST00000434601 PROP1O75360 226 aa9.17□□□□□ -0.94
LINC00539-203ENST00000434601 C1QBP02746 253 aa9.17□□□□□ -0.94
LINC00539-203ENST00000434601 COX7A1P24310 79 aa9.17□□□□□ -0.94
LINC00539-203ENST00000434601 THBS3P49746 956 aa9.17□□□□□ -0.94
LINC00539-203ENST00000434601 ZNF137PP52743 207 aa9.17□□□□□ -0.94
LINC00539-203ENST00000434601 DLX1P56177 255 aa9.17□□□□□ -0.94
LINC00539-203ENST00000434601 SRSF4Q08170 494 aaKnown RBP9.17□□□□□ -0.94
LINC00539-203ENST00000434601 OR2B11Q5JQS5 317 aa9.17□□□□□ -0.94
LINC00539-203ENST00000434601 FAM120AOSQ5T036 256 aa9.17□□□□□ -0.94
LINC00539-203ENST00000434601 GGNBP1Q5YKI7 109 aa9.17□□□□□ -0.94
LINC00539-203ENST00000434601 ZNF833PQ6ZTB9 187 aa9.17□□□□□ -0.94
LINC00539-203ENST00000434601 LYZL2Q7Z4W2 148 aa9.17□□□□□ -0.94
LINC00539-203ENST00000434601 SELENOHQ8IZQ5 122 aaKnown RBP9.17□□□□□ -0.94
LINC00539-203ENST00000434601 BEND2Q8NDZ0 799 aa9.17□□□□□ -0.94
LINC00539-203ENST00000434601 OR13D1Q8NGV5 346 aa9.17□□□□□ -0.94
LINC00539-203ENST00000434601 ADTRPQ96IZ2 230 aa9.17□□□□□ -0.94
LINC00539-203ENST00000434601 C19orf24Q9BVV8 132 aa9.17□□□□□ -0.94
LINC00539-203ENST00000434601 FAM212BQ9NTI7 297 aaPredicted RBP9.17□□□□□ -0.94
LINC00539-203ENST00000434601 TMED3Q9Y3Q3 217 aa9.17□□□□□ -0.94
LINC00539-203ENST00000434601 SVEP1Q4LDE5 3571 aa9.16□□□□□ -0.94
LINC00539-203ENST00000434601 C13orf42A0A1B0GVH6 325 aa9.16□□□□□ -0.94
LINC00539-203ENST00000434601 MPTX1A8MV57 137 aa9.16□□□□□ -0.94
LINC00539-203ENST00000434601 TGFAP01135 160 aa9.16□□□□□ -0.94
LINC00539-203ENST00000434601 RPA2P15927 270 aa9.16□□□□□ -0.94
LINC00539-203ENST00000434601 PRTN3P24158 256 aa9.16□□□□□ -0.94
LINC00539-203ENST00000434601 KIR2DS2P43631 304 aa9.16□□□□□ -0.94
LINC00539-203ENST00000434601 EIF2B2P49770 351 aaKnown RBP9.16□□□□□ -0.94
LINC00539-203ENST00000434601 PRRX1P54821 245 aa9.16□□□□□ -0.94
LINC00539-203ENST00000434601 PRB3Q04118 309 aaPredicted RBP9.16□□□□□ -0.94
LINC00539-203ENST00000434601 HLA-DRB5Q30154 266 aa9.16□□□□□ -0.94
LINC00539-203ENST00000434601 ZNF585BQ52M93 769 aa9.16□□□□□ -0.94
LINC00539-203ENST00000434601 NCR3LG1Q68D85 454 aa9.16□□□□□ -0.94
LINC00539-203ENST00000434601 C1orf229Q6ZS94 237 aaPredicted RBP9.16□□□□□ -0.94
LINC00539-203ENST00000434601 C1orf122Q6ZSJ8 110 aa9.16□□□□□ -0.94
LINC00539-203ENST00000434601 SPAG16Q8N0X2 631 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 283.8 ms