RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 CXXC4Q9H2H0 198 aa9.87□□□□□ -0.83
CD44-209ENST00000433892 GAR1Q9NY12 217 aaKnown RBP9.87□□□□□ -0.83
CD44-209ENST00000433892 NKX2-8O15522 239 aa9.87□□□□□ -0.83
CD44-209ENST00000433892 IGKV3-15P01624 115 aa9.87□□□□□ -0.83
CD44-209ENST00000433892 FGF7P21781 194 aa9.87□□□□□ -0.83
CD44-209ENST00000433892 S100A2P29034 98 aa9.87□□□□□ -0.83
CD44-209ENST00000433892 RND2P52198 227 aa9.87□□□□□ -0.83
CD44-209ENST00000433892 NKX6-1P78426 367 aaPredicted RBP9.87□□□□□ -0.83
CD44-209ENST00000433892 TFF3Q07654 80 aa9.87□□□□□ -0.83
CD44-209ENST00000433892 SRSF6Q13247 344 aaKnown RBP9.87□□□□□ -0.83
CD44-209ENST00000433892 ADIRFQ15847 76 aa9.87□□□□□ -0.83
CD44-209ENST00000433892 LTC4SQ16873 150 aa9.87□□□□□ -0.83
CD44-209ENST00000433892 PYY3Q5JQD4 70 aa9.87□□□□□ -0.83
CD44-209ENST00000433892 H2BFWTQ7Z2G1 175 aa9.87□□□□□ -0.83
CD44-209ENST00000433892 CENPVQ7Z7K6 275 aaPredicted RBP9.87□□□□□ -0.83
CD44-209ENST00000433892 WDR31Q8NA23 367 aa9.87□□□□□ -0.83
CD44-209ENST00000433892 OR10P1Q8NGE3 313 aa9.87□□□□□ -0.83
CD44-209ENST00000433892 GATAD1Q8WUU5 269 aa9.87□□□□□ -0.83
CD44-209ENST00000433892 RPUSD4Q96CM3 377 aaKnown RBP9.87□□□□□ -0.83
CD44-209ENST00000433892 PLPPR2Q96GM1 343 aa9.87□□□□□ -0.83
CD44-209ENST00000433892 DCTN5Q9BTE1 182 aa9.87□□□□□ -0.83
CD44-209ENST00000433892 TMEM147Q9BVK8 224 aa9.87□□□□□ -0.83
CD44-209ENST00000433892 PSG11Q9UQ72 335 aa9.87□□□□□ -0.83
CD44-209ENST00000433892 TIMM9Q9Y5J7 89 aa9.87□□□□□ -0.83
CD44-209ENST00000433892 PMS2P5A8MQ11 134 aa9.86□□□□□ -0.83
CD44-209ENST00000433892 ST8SIA5O15466 376 aa9.86□□□□□ -0.83
CD44-209ENST00000433892 CLDN14O95500 239 aa9.86□□□□□ -0.83
CD44-209ENST00000433892 IGHV2-70P01814 119 aa9.86□□□□□ -0.83
CD44-209ENST00000433892 SOD3P08294 240 aa9.86□□□□□ -0.83
CD44-209ENST00000433892 TRGC1P0CF51 173 aa9.86□□□□□ -0.83
CD44-209ENST00000433892 RD3LP0DJH9 198 aa9.86□□□□□ -0.83
CD44-209ENST00000433892 DEFA4P12838 97 aa9.86□□□□□ -0.83
CD44-209ENST00000433892 MDKP21741 143 aaPredicted RBP9.86□□□□□ -0.83
CD44-209ENST00000433892 KIR2DL2P43627 348 aaPredicted RBP9.86□□□□□ -0.83
CD44-209ENST00000433892 Q3ZCU0 254 aa9.86□□□□□ -0.83
CD44-209ENST00000433892 FFAR4Q5NUL3 377 aa9.86□□□□□ -0.83
CD44-209ENST00000433892 OR10G9Q8NGN4 311 aa9.86□□□□□ -0.83
CD44-209ENST00000433892 OR10G7Q8NGN6 311 aa9.86□□□□□ -0.83
CD44-209ENST00000433892 OR13D1Q8NGV5 346 aa9.86□□□□□ -0.83
CD44-209ENST00000433892 LOXL4Q96JB6 756 aa9.86□□□□□ -0.83
CD44-209ENST00000433892 GPR61Q9BZJ8 451 aa9.86□□□□□ -0.83
CD44-209ENST00000433892 CECR9P0C854 216 aa9.86□□□□□ -0.83
CD44-209ENST00000433892 FOXF2Q12947 444 aa9.86□□□□□ -0.83
CD44-209ENST00000433892 EDDM3AQ14507 147 aa9.86□□□□□ -0.83
CD44-209ENST00000433892 GUSBP1Q15486 140 aa9.86□□□□□ -0.83
CD44-209ENST00000433892 ATP6V1FQ16864 119 aa9.86□□□□□ -0.83
CD44-209ENST00000433892 CDPF1Q6NVV7 123 aa9.86□□□□□ -0.83
CD44-209ENST00000433892 C9orf106Q8NAJ2 232 aa9.86□□□□□ -0.83
CD44-209ENST00000433892 FDCSPQ8NFU4 85 aa9.86□□□□□ -0.83
CD44-209ENST00000433892 TRBV23-1A0A0A0MS06 115 aa9.85□□□□□ -0.83
CD44-209ENST00000433892 PPP1R2P9O14990 202 aa9.85□□□□□ -0.83
CD44-209ENST00000433892 IGHG3P01860 377 aa9.85□□□□□ -0.83
CD44-209ENST00000433892 PSMB3P49720 205 aa9.85□□□□□ -0.83
CD44-209ENST00000433892 NCR3LG1Q68D85 454 aa9.85□□□□□ -0.83
CD44-209ENST00000433892 OR10D4PQ8NGN7 298 aa9.85□□□□□ -0.83
CD44-209ENST00000433892 PRR7Q8TB68 274 aa9.85□□□□□ -0.83
CD44-209ENST00000433892 NPCDR1Q9BY65 106 aa9.85□□□□□ -0.83
CD44-209ENST00000433892 NAT8Q9UHE5 227 aa9.85□□□□□ -0.83
CD44-209ENST00000433892 SVILO95425 2214 aa9.85□□□□□ -0.83
CD44-209ENST00000433892 CTXND1A0A1B0GTU2 59 aa9.85□□□□□ -0.83
CD44-209ENST00000433892 MARCH11A6NNE9 402 aa9.85□□□□□ -0.83
CD44-209ENST00000433892 SEC14L6B5MCN3 397 aa9.85□□□□□ -0.83
CD44-209ENST00000433892 RAB29O14966 203 aa9.85□□□□□ -0.83
CD44-209ENST00000433892 OPN1MWP04001 364 aa9.85□□□□□ -0.83
CD44-209ENST00000433892 OPN1MW2P0DN77 364 aa9.85□□□□□ -0.83
CD44-209ENST00000433892 OPN1MW3P0DN78 364 aa9.85□□□□□ -0.83
CD44-209ENST00000433892 COX5AP20674 150 aa9.85□□□□□ -0.83
CD44-209ENST00000433892 PMS2P11Q13670 270 aa9.85□□□□□ -0.83
CD44-209ENST00000433892 TMEM241Q24JQ0 296 aa9.85□□□□□ -0.83
CD44-209ENST00000433892 SMIM21Q3B7S5 101 aa9.85□□□□□ -0.83
CD44-209ENST00000433892 CD177Q8N6Q3 437 aa9.85□□□□□ -0.83
CD44-209ENST00000433892 NECAP1Q8NC96 275 aa9.85□□□□□ -0.83
CD44-209ENST00000433892 AGMATQ9BSE5 352 aa9.85□□□□□ -0.83
CD44-209ENST00000433892 TRBV24-1A0A075B6N3 115 aa9.84□□□□□ -0.83
CD44-209ENST00000433892 KBTBD11O94819 623 aa9.84□□□□□ -0.83
CD44-209ENST00000433892 MBP02144 154 aa9.84□□□□□ -0.83
CD44-209ENST00000433892 GCH1P30793 250 aa9.84□□□□□ -0.83
CD44-209ENST00000433892 CYP2G1PQ6ZSU1 146 aa9.84□□□□□ -0.83
CD44-209ENST00000433892 C16orf82Q7Z2V1 217 aa9.84□□□□□ -0.83
CD44-209ENST00000433892 HIST3H2BBQ8N257 126 aa9.84□□□□□ -0.83
CD44-209ENST00000433892 ZNF709Q8N972 641 aa9.84□□□□□ -0.83
CD44-209ENST00000433892 OR4F5Q8NH21 305 aa9.84□□□□□ -0.83
CD44-209ENST00000433892 RAB24Q969Q5 203 aa9.84□□□□□ -0.83
CD44-209ENST00000433892 LURAP1Q96LR2 239 aa9.84□□□□□ -0.83
CD44-209ENST00000433892 CIB3Q96Q77 187 aaPredicted RBP9.84□□□□□ -0.83
CD44-209ENST00000433892 OR4F4Q96R69 305 aa9.84□□□□□ -0.83
CD44-209ENST00000433892 TAAR6Q96RI8 345 aa9.84□□□□□ -0.83
CD44-209ENST00000433892 MRPL37Q9BZE1 423 aaKnown RBP9.84□□□□□ -0.83
CD44-209ENST00000433892 CTDSP1Q9GZU7 261 aa9.84□□□□□ -0.83
CD44-209ENST00000433892 EP300Q09472 2414 aaPredicted RBP9.84□□□□□ -0.83
CD44-209ENST00000433892 IFNL4K9M1U5 179 aa9.84□□□□□ -0.83
CD44-209ENST00000433892 SPINT2O43291 252 aa9.84□□□□□ -0.83
CD44-209ENST00000433892 IGHV3-13P01766 116 aa9.84□□□□□ -0.83
CD44-209ENST00000433892 IGHV3-7P01780 117 aa9.84□□□□□ -0.83
CD44-209ENST00000433892 KITLGP21583 273 aa9.84□□□□□ -0.83
CD44-209ENST00000433892 TRIP6Q15654 476 aaKnown RBP9.84□□□□□ -0.83
CD44-209ENST00000433892 BSXQ3C1V8 233 aa9.84□□□□□ -0.83
CD44-209ENST00000433892 ZNF718Q3SXZ3 478 aa9.84□□□□□ -0.83
CD44-209ENST00000433892 FAM209BQ5JX69 171 aa9.84□□□□□ -0.83
CD44-209ENST00000433892 ALKBH2Q6NS38 261 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms