RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 TMEM210A6NLX4 147 aa12.45□□□□□ -0.42
DDX56-205ENST00000433257 ZNF891A8MT65 544 aaPredicted RBP12.45□□□□□ -0.42
DDX56-205ENST00000433257 SELEP16581 610 aa12.45□□□□□ -0.42
DDX56-205ENST00000433257 ZNF16P17020 682 aaPredicted RBP12.45□□□□□ -0.42
DDX56-205ENST00000433257 RPL19P84098 196 aaKnown RBP12.45□□□□□ -0.42
DDX56-205ENST00000433257 USF2Q15853 346 aaPredicted RBP12.45□□□□□ -0.42
DDX56-205ENST00000433257 FFAR4Q5NUL3 377 aa12.45□□□□□ -0.42
DDX56-205ENST00000433257 TIPARPQ7Z3E1 657 aaKnown RBP12.45□□□□□ -0.42
DDX56-205ENST00000433257 NUFIP2Q7Z417 695 aaKnown RBP12.45□□□□□ -0.42
DDX56-205ENST00000433257 DRAM1Q8N682 238 aa12.45□□□□□ -0.42
DDX56-205ENST00000433257 GPHA2Q96T91 129 aa12.45□□□□□ -0.42
DDX56-205ENST00000433257 TMEM204Q9BSN7 226 aa12.45□□□□□ -0.42
DDX56-205ENST00000433257 OR1A1Q9P1Q5 309 aa12.45□□□□□ -0.42
DDX56-205ENST00000433257 IL36RNQ9UBH0 155 aa12.45□□□□□ -0.42
DDX56-205ENST00000433257 A0A1W2PPQ1 181 aa12.44□□□□□ -0.42
DDX56-205ENST00000433257 TMEM30CPA0ZSE6 113 aa12.44□□□□□ -0.42
DDX56-205ENST00000433257 MLNRO43193 412 aa12.44□□□□□ -0.42
DDX56-205ENST00000433257 KLK10O43240 276 aa12.44□□□□□ -0.42
DDX56-205ENST00000433257 CLDN14O95500 239 aa12.44□□□□□ -0.42
DDX56-205ENST00000433257 P0C879 139 aa12.44□□□□□ -0.42
DDX56-205ENST00000433257 CDC34P49427 236 aaPredicted RBP12.44□□□□□ -0.42
DDX56-205ENST00000433257 ERVS71-1P61550 626 aa12.44□□□□□ -0.42
DDX56-205ENST00000433257 PLGLB1Q02325 96 aa12.44□□□□□ -0.42
DDX56-205ENST00000433257 ZNF146Q15072 292 aa12.44□□□□□ -0.42
DDX56-205ENST00000433257 OR8G2PQ6IF36 304 aa12.44□□□□□ -0.42
DDX56-205ENST00000433257 PPP1R32Q7Z5V6 425 aa12.44□□□□□ -0.42
DDX56-205ENST00000433257 MRPL41Q8IXM3 137 aaKnown RBP12.44□□□□□ -0.42
DDX56-205ENST00000433257 BATF2Q8N1L9 274 aa12.44□□□□□ -0.42
DDX56-205ENST00000433257 ZNF664Q8N3J9 261 aa12.44□□□□□ -0.42
DDX56-205ENST00000433257 GBGT1Q8N5D6 347 aa12.44□□□□□ -0.42
DDX56-205ENST00000433257 GALMQ96C23 342 aa12.44□□□□□ -0.42
DDX56-205ENST00000433257 PCGF1Q9BSM1 259 aa12.44□□□□□ -0.42
DDX56-205ENST00000433257 ZNF705GA8MUZ8 300 aaPredicted RBP12.43□□□□□ -0.42
DDX56-205ENST00000433257 WDR1O75083 606 aa12.43□□□□□ -0.42
DDX56-205ENST00000433257 RFPL3SP0C7P2 107 aa12.43□□□□□ -0.42
DDX56-205ENST00000433257 OR10J1P30954 320 aa12.43□□□□□ -0.42
DDX56-205ENST00000433257 ERVFC1-1P60608 527 aa12.43□□□□□ -0.42
DDX56-205ENST00000433257 ERVK11-1P61568 191 aa12.43□□□□□ -0.42
DDX56-205ENST00000433257 NUTF2P61970 127 aaKnown RBP12.43□□□□□ -0.42
DDX56-205ENST00000433257 RANP62826 216 aaKnown RBP12.43□□□□□ -0.42
DDX56-205ENST00000433257 ACSM6Q6P461 480 aa12.43□□□□□ -0.42
DDX56-205ENST00000433257 TRAT1Q6PIZ9 186 aa12.43□□□□□ -0.42
DDX56-205ENST00000433257 FAM180AQ6UWF9 173 aa12.43□□□□□ -0.42
DDX56-205ENST00000433257 MCEMP1Q8IX19 187 aa12.43□□□□□ -0.42
DDX56-205ENST00000433257 DTD1Q8TEA8 209 aa12.43□□□□□ -0.42
DDX56-205ENST00000433257 NINJ1Q92982 152 aa12.43□□□□□ -0.42
DDX56-205ENST00000433257 HS3ST6Q96QI5 342 aa12.43□□□□□ -0.42
DDX56-205ENST00000433257 NPCDR1Q9BY65 106 aa12.43□□□□□ -0.42
DDX56-205ENST00000433257 PRRG4Q9BZD6 226 aa12.43□□□□□ -0.42
DDX56-205ENST00000433257 RAXQ9Y2V3 346 aa12.43□□□□□ -0.42
DDX56-205ENST00000433257 A0A0G2JMM0 328 aa12.42□□□□□ -0.42
DDX56-205ENST00000433257 A0A1W2PPB8 328 aa12.42□□□□□ -0.42
DDX56-205ENST00000433257 A0A1W2PRS3 328 aa12.42□□□□□ -0.42
DDX56-205ENST00000433257 OOEPA6NGQ2 149 aa12.42□□□□□ -0.42
DDX56-205ENST00000433257 KIR3DP1A8MWS1 328 aa12.42□□□□□ -0.42
DDX56-205ENST00000433257 C11orf94C9JXX5 98 aa12.42□□□□□ -0.42
DDX56-205ENST00000433257 M0R143 59 aa12.42□□□□□ -0.42
DDX56-205ENST00000433257 OR2H2O95918 312 aa12.42□□□□□ -0.42
DDX56-205ENST00000433257 LHX2P50458 406 aa12.42□□□□□ -0.42
DDX56-205ENST00000433257 UBE2NP61088 152 aaKnown RBP12.42□□□□□ -0.42
DDX56-205ENST00000433257 PAFAH1B2P68402 229 aa12.42□□□□□ -0.42
DDX56-205ENST00000433257 ZNF124Q15973 351 aa12.42□□□□□ -0.42
DDX56-205ENST00000433257 SLC35E4Q6ICL7 350 aa12.42□□□□□ -0.42
DDX56-205ENST00000433257 WDYHV1Q96HA8 205 aa12.42□□□□□ -0.42
DDX56-205ENST00000433257 SLC25A22Q9H936 323 aa12.42□□□□□ -0.42
DDX56-205ENST00000433257 GP6Q9HCN6 339 aa12.42□□□□□ -0.42
DDX56-205ENST00000433257 FUT9Q9Y231 359 aa12.42□□□□□ -0.42
DDX56-205ENST00000433257 FRYQ5TBA9 3013 aa12.42□□□□□ -0.42
DDX56-205ENST00000433257 PMS2P5A8MQ11 134 aa12.42□□□□□ -0.42
DDX56-205ENST00000433257 IGKV1D-33P01593 117 aa12.42□□□□□ -0.42
DDX56-205ENST00000433257 IGKV1-33P01594 117 aa12.42□□□□□ -0.42
DDX56-205ENST00000433257 GZMHP20718 246 aa12.42□□□□□ -0.42
DDX56-205ENST00000433257 MDKP21741 143 aaPredicted RBP12.42□□□□□ -0.42
DDX56-205ENST00000433257 PAX5Q02548 391 aa12.42□□□□□ -0.42
DDX56-205ENST00000433257 TBC1D28Q2M2D7 210 aa12.42□□□□□ -0.42
DDX56-205ENST00000433257 C1orf194Q5T5A4 169 aa12.42□□□□□ -0.42
DDX56-205ENST00000433257 HSD17B10Q99714 261 aaKnown RBP12.42□□□□□ -0.42
DDX56-205ENST00000433257 FKBP11Q9NYL4 201 aa12.42□□□□□ -0.42
DDX56-205ENST00000433257 A0A096LPE4 126 aa12.41□□□□□ -0.42
DDX56-205ENST00000433257 MDFIC2A0A1B0GVS7 189 aa12.41□□□□□ -0.42
DDX56-205ENST00000433257 A0A1W2PPZ6 126 aa12.41□□□□□ -0.42
DDX56-205ENST00000433257 ATXN7O15265 892 aaPredicted RBP12.41□□□□□ -0.42
DDX56-205ENST00000433257 TCAPO15273 167 aa12.41□□□□□ -0.42
DDX56-205ENST00000433257 CLDN18P56856 261 aa12.41□□□□□ -0.42
DDX56-205ENST00000433257 COX19Q49B96 90 aa12.41□□□□□ -0.42
DDX56-205ENST00000433257 H2BFWTQ7Z2G1 175 aa12.41□□□□□ -0.42
DDX56-205ENST00000433257 TMEM144Q7Z5S9 345 aa12.41□□□□□ -0.42
DDX56-205ENST00000433257 TUSC5Q8IXB3 177 aa12.41□□□□□ -0.42
DDX56-205ENST00000433257 NECAP1Q8NC96 275 aa12.41□□□□□ -0.42
DDX56-205ENST00000433257 MISP3Q96FF7 219 aa12.41□□□□□ -0.42
DDX56-205ENST00000433257 ZNF703Q9H7S9 590 aaPredicted RBP12.41□□□□□ -0.42
DDX56-205ENST00000433257 PPP1R14DQ9NXH3 145 aa12.41□□□□□ -0.42
DDX56-205ENST00000433257 TRAPPC1Q9Y5R8 145 aa12.41□□□□□ -0.42
DDX56-205ENST00000433257 SDK2Q58EX2 2172 aa12.4□□□□□ -0.42
DDX56-205ENST00000433257 C21orf140B9A014 251 aa12.4□□□□□ -0.42
DDX56-205ENST00000433257 PAGE4O60829 102 aa12.4□□□□□ -0.42
DDX56-205ENST00000433257 MT-CO2P00403 227 aa12.4□□□□□ -0.42
DDX56-205ENST00000433257 CRYABP02511 175 aaKnown RBP12.4□□□□□ -0.42
DDX56-205ENST00000433257 RNF224P0DH78 156 aa12.4□□□□□ -0.42
DDX56-205ENST00000433257 NDUFB7P17568 137 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms