RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 FAM151BQ6UXP7 276 aa3.12□□□□□ -1.91
HMGB3-203ENST00000430118 ZNF836Q6ZNA1 936 aa3.12□□□□□ -1.91
HMGB3-203ENST00000430118 SLC25A48Q6ZT89 311 aaKnown RBP3.12□□□□□ -1.91
HMGB3-203ENST00000430118 ZNF440Q8IYI8 595 aa3.12□□□□□ -1.91
HMGB3-203ENST00000430118 H1FOOQ8IZA3 346 aaPredicted RBP3.12□□□□□ -1.91
HMGB3-203ENST00000430118 SELENOHQ8IZQ5 122 aaKnown RBP3.12□□□□□ -1.91
HMGB3-203ENST00000430118 OR6V1Q8N148 313 aa3.12□□□□□ -1.91
HMGB3-203ENST00000430118 ZNF664Q8N3J9 261 aa3.12□□□□□ -1.91
HMGB3-203ENST00000430118 C17orf78Q8N4C9 275 aa3.12□□□□□ -1.91
HMGB3-203ENST00000430118 SDR9C7Q8NEX9 313 aa3.12□□□□□ -1.91
HMGB3-203ENST00000430118 ATP6V1C2Q8NEY4 427 aa3.12□□□□□ -1.91
HMGB3-203ENST00000430118 OR4K5Q8NGD3 323 aa3.12□□□□□ -1.91
HMGB3-203ENST00000430118 OR10AD1Q8NGE0 317 aa3.12□□□□□ -1.91
HMGB3-203ENST00000430118 OR10D4PQ8NGN7 298 aa3.12□□□□□ -1.91
HMGB3-203ENST00000430118 OR9Q1Q8NGQ5 310 aa3.12□□□□□ -1.91
HMGB3-203ENST00000430118 OR1J4Q8NGS1 313 aa3.12□□□□□ -1.91
HMGB3-203ENST00000430118 OR5W2Q8NH69 310 aa3.12□□□□□ -1.91
HMGB3-203ENST00000430118 ZPLD1Q8TCW7 415 aa3.12□□□□□ -1.91
HMGB3-203ENST00000430118 GNPDA2Q8TDQ7 276 aa3.12□□□□□ -1.91
HMGB3-203ENST00000430118 RERGQ96A58 199 aaPredicted RBP3.12□□□□□ -1.91
HMGB3-203ENST00000430118 VPS25Q9BRG1 176 aa3.12□□□□□ -1.91
HMGB3-203ENST00000430118 TBL1XR1Q9BZK7 514 aa3.12□□□□□ -1.91
HMGB3-203ENST00000430118 ARV1Q9H2C2 271 aa3.12□□□□□ -1.91
HMGB3-203ENST00000430118 TMEM38AQ9H6F2 299 aa3.12□□□□□ -1.91
HMGB3-203ENST00000430118 WFDC1Q9HC57 220 aa3.12□□□□□ -1.91
HMGB3-203ENST00000430118 TMEM100Q9NV29 134 aa3.12□□□□□ -1.91
HMGB3-203ENST00000430118 NDUFB11Q9NX14 153 aa3.12□□□□□ -1.91
HMGB3-203ENST00000430118 ZNF226Q9NYT6 803 aa3.12□□□□□ -1.91
HMGB3-203ENST00000430118 ANGPT4Q9Y264 503 aa3.12□□□□□ -1.91
HMGB3-203ENST00000430118 ZNF337Q9Y3M9 751 aa3.12□□□□□ -1.91
HMGB3-203ENST00000430118 RTTNQ86VV8 2226 aa3.12□□□□□ -1.91
HMGB3-203ENST00000430118 HCFC1P51610 2035 aa3.12□□□□□ -1.91
HMGB3-203ENST00000430118 MAP1AP78559 2803 aaPredicted RBP3.11□□□□□ -1.91
HMGB3-203ENST00000430118 TRAV30A0A087WSZ9 112 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 TRAV9-2A0A087WT02 112 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 LOC285095A0A1B0GVY8 99 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 A0A1W2PQL4 384 aaPredicted RBP3.11□□□□□ -1.91
HMGB3-203ENST00000430118 PPP5D1E7EU14 171 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 APOC4-APOC2K7ER74 178 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 ZNF593O00488 134 aaPredicted RBP3.11□□□□□ -1.91
HMGB3-203ENST00000430118 FCN1O00602 326 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 CYB5BO43169 146 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 MPZL2O60487 215 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 OR2F2O95006 317 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 AIFM1O95831 613 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 PMP2P02689 132 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 STATHP02808 62 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 GAPDHP04406 335 aaKnown RBP3.11□□□□□ -1.91
HMGB3-203ENST00000430118 ALDOBP05062 364 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 HLA-DQB2P05538 268 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 UCHL1P09936 223 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 GATA1P15976 413 aaPredicted RBP3.11□□□□□ -1.91
HMGB3-203ENST00000430118 CSNK2A2P19784 350 aaPredicted RBP3.11□□□□□ -1.91
HMGB3-203ENST00000430118 IL2RGP31785 369 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 PPOXP50336 477 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 CDKN2DP55273 166 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 BIDP55957 195 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 PAX2Q02962 417 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 ZNF616Q08AN1 781 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 MLLT11Q13015 90 aaPredicted RBP3.11□□□□□ -1.91
HMGB3-203ENST00000430118 PRDX4Q13162 271 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 OR2F1Q13607 317 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 IHHQ14623 411 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 HERPUD1Q15011 391 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 SSX1Q16384 188 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 IQCJQ1A5X6 159 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 KHDC3LQ587J8 217 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 DMRTC1Q5HYR2 192 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 COA6Q5JTJ3 125 aaKnown RBP3.11□□□□□ -1.91
HMGB3-203ENST00000430118 C11orf71Q6IPW1 123 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 TMEM205Q6UW68 189 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 HEPN1Q6WQI6 88 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 C6orf120Q7Z4R8 191 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 NRMQ8IXM6 262 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 KCNRGQ8N5I3 272 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 TMEM156Q8N614 296 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 ZFP62Q8NB50 900 aaPredicted RBP3.11□□□□□ -1.91
HMGB3-203ENST00000430118 PROKR2Q8NFJ6 384 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 OR4F15Q8NGB8 312 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 OR51L1Q8NGJ5 315 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 OR1L6Q8NGR2 347 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 OR11L1Q8NGX0 322 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 OR5K2Q8NHB8 316 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 FAM110BQ8TC76 370 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 ABHD3Q8WU67 409 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 APH1BQ8WW43 257 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 RASL10AQ92737 203 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 FGGYQ96C11 551 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 RPUSD4Q96CM3 377 aaKnown RBP3.11□□□□□ -1.91
HMGB3-203ENST00000430118 LRRC58Q96CX6 371 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 TEX37Q96LM6 180 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 YPEL4Q96NS1 127 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 TECTBQ96PL2 329 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 OR8B4Q96RC9 309 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 OR52E6Q96RD3 313 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 MGLLQ99685 303 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 C20orf144Q9BQM9 153 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 HES7Q9BYE0 225 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 PLA2G12AQ9BZM1 189 aa3.11□□□□□ -1.91
HMGB3-203ENST00000430118 ARL6Q9H0F7 186 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms