RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 APELAP0DMC3 54 aa13.86□□□□□ -0.19
UPK3BP1-201ENST00000428678 RNLSQ5VYX0 342 aa13.86□□□□□ -0.19
UPK3BP1-201ENST00000428678 DEFB125Q8N687 156 aa13.86□□□□□ -0.19
UPK3BP1-201ENST00000428678 KCNG3Q8TAE7 436 aa13.86□□□□□ -0.19
UPK3BP1-201ENST00000428678 USMG5Q96IX5 58 aa13.86□□□□□ -0.19
UPK3BP1-201ENST00000428678 TMEM68Q96MH6 324 aa13.86□□□□□ -0.19
UPK3BP1-201ENST00000428678 TM2D1Q9BX74 207 aa13.86□□□□□ -0.19
UPK3BP1-201ENST00000428678 RIMS4Q9H426 269 aaPredicted RBP13.86□□□□□ -0.19
UPK3BP1-201ENST00000428678 SMPD3Q9NY59 655 aaPredicted RBP13.86□□□□□ -0.19
UPK3BP1-201ENST00000428678 SLC2A8Q9NY64 477 aa13.86□□□□□ -0.19
UPK3BP1-201ENST00000428678 AK3Q9UIJ7 227 aa13.86□□□□□ -0.19
UPK3BP1-201ENST00000428678 TRBV6-6A0A0A6YYG2 114 aa13.85□□□□□ -0.19
UPK3BP1-201ENST00000428678 RBMY1BA6NDE4 496 aaKnown RBP13.85□□□□□ -0.19
UPK3BP1-201ENST00000428678 RBMY1EA6NEQ0 496 aaKnown RBP13.85□□□□□ -0.19
UPK3BP1-201ENST00000428678 BRI3O95415 125 aa13.85□□□□□ -0.19
UPK3BP1-201ENST00000428678 SCTP09683 121 aa13.85□□□□□ -0.19
UPK3BP1-201ENST00000428678 RBMY1DP0C7P1 496 aaKnown RBP13.85□□□□□ -0.19
UPK3BP1-201ENST00000428678 MECP2P51608 486 aaKnown RBP13.85□□□□□ -0.19
UPK3BP1-201ENST00000428678 ST3GAL4Q11206 333 aa13.85□□□□□ -0.19
UPK3BP1-201ENST00000428678 UNC119Q13432 240 aa13.85□□□□□ -0.19
UPK3BP1-201ENST00000428678 CD300EQ496F6 205 aaPredicted RBP13.85□□□□□ -0.19
UPK3BP1-201ENST00000428678 GLT8D1Q68CQ7 371 aa13.85□□□□□ -0.19
UPK3BP1-201ENST00000428678 GGHQ92820 318 aa13.85□□□□□ -0.19
UPK3BP1-201ENST00000428678 SNAPC3Q92966 411 aa13.85□□□□□ -0.19
UPK3BP1-201ENST00000428678 PTX4Q96A99 478 aa13.85□□□□□ -0.19
UPK3BP1-201ENST00000428678 PHB2Q99623 299 aa13.85□□□□□ -0.19
UPK3BP1-201ENST00000428678 WFDC10AQ9H1F0 79 aa13.85□□□□□ -0.19
UPK3BP1-201ENST00000428678 SRD5A3Q9H8P0 318 aa13.85□□□□□ -0.19
UPK3BP1-201ENST00000428678 A0A0A6YYD4 124 aa13.84□□□□□ -0.19
UPK3BP1-201ENST00000428678 AIREO43918 545 aa13.84□□□□□ -0.19
UPK3BP1-201ENST00000428678 IGLV2-23P01705 113 aa13.84□□□□□ -0.19
UPK3BP1-201ENST00000428678 CD7P09564 240 aa13.84□□□□□ -0.19
UPK3BP1-201ENST00000428678 INSL4Q14641 139 aa13.84□□□□□ -0.19
UPK3BP1-201ENST00000428678 C1orf100Q5SVJ3 147 aa13.84□□□□□ -0.19
UPK3BP1-201ENST00000428678 LAX1Q8IWV1 398 aa13.84□□□□□ -0.19
UPK3BP1-201ENST00000428678 DYNLRB2Q8TF09 96 aa13.84□□□□□ -0.19
UPK3BP1-201ENST00000428678 LINC00476Q8WZB0 136 aa13.84□□□□□ -0.19
UPK3BP1-201ENST00000428678 HARBI1Q96MB7 349 aa13.84□□□□□ -0.19
UPK3BP1-201ENST00000428678 MGAT4AQ9UM21 535 aa13.84□□□□□ -0.19
UPK3BP1-201ENST00000428678 EFCAB10A6NFE3 127 aa13.83□□□□□ -0.2
UPK3BP1-201ENST00000428678 MYL12BO14950 172 aa13.83□□□□□ -0.2
UPK3BP1-201ENST00000428678 RBMXL2O75526 392 aaKnown RBP13.83□□□□□ -0.2
UPK3BP1-201ENST00000428678 CD1AP06126 327 aa13.83□□□□□ -0.2
UPK3BP1-201ENST00000428678 CRYGBP07316 175 aa13.83□□□□□ -0.2
UPK3BP1-201ENST00000428678 RBM48Q5RL73 367 aaKnown RBP13.83□□□□□ -0.2
UPK3BP1-201ENST00000428678 LRRTM1Q86UE6 522 aa13.83□□□□□ -0.2
UPK3BP1-201ENST00000428678 C10orf67Q8IYJ2 551 aa13.83□□□□□ -0.2
UPK3BP1-201ENST00000428678 PQLC1Q8N2U9 271 aa13.83□□□□□ -0.2
UPK3BP1-201ENST00000428678 CYGBQ8WWM9 190 aa13.83□□□□□ -0.2
UPK3BP1-201ENST00000428678 MSGN1A6NI15 193 aa13.82□□□□□ -0.2
UPK3BP1-201ENST00000428678 ZNF785A8K8V0 405 aa13.82□□□□□ -0.2
UPK3BP1-201ENST00000428678 TMEM14DPA8MWL7 114 aa13.82□□□□□ -0.2
UPK3BP1-201ENST00000428678 OR11H12B2RN74 326 aa13.82□□□□□ -0.2
UPK3BP1-201ENST00000428678 BMPR1BO00238 502 aa13.82□□□□□ -0.2
UPK3BP1-201ENST00000428678 SOCS1O15524 211 aa13.82□□□□□ -0.2
UPK3BP1-201ENST00000428678 WNT4P56705 351 aa13.82□□□□□ -0.2
UPK3BP1-201ENST00000428678 CBX3Q13185 183 aa13.82□□□□□ -0.2
UPK3BP1-201ENST00000428678 EXOSC2Q13868 293 aaKnown RBP13.82□□□□□ -0.2
UPK3BP1-201ENST00000428678 GUCA2BQ16661 112 aa13.82□□□□□ -0.2
UPK3BP1-201ENST00000428678 ACSM3Q53FZ2 586 aa13.82□□□□□ -0.2
UPK3BP1-201ENST00000428678 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.82□□□□□ -0.2
UPK3BP1-201ENST00000428678 ADAD2Q8NCV1 583 aaKnown RBP13.82□□□□□ -0.2
UPK3BP1-201ENST00000428678 S100A14Q9HCY8 104 aa13.82□□□□□ -0.2
UPK3BP1-201ENST00000428678 Q9N2K0 584 aa13.82□□□□□ -0.2
UPK3BP1-201ENST00000428678 C12orf4Q9NQ89 552 aa13.82□□□□□ -0.2
UPK3BP1-201ENST00000428678 RDH8Q9NYR8 311 aa13.82□□□□□ -0.2
UPK3BP1-201ENST00000428678 IGKV1-6A0A0C4DH72 117 aa13.81□□□□□ -0.2
UPK3BP1-201ENST00000428678 SHOXO15266 292 aa13.81□□□□□ -0.2
UPK3BP1-201ENST00000428678 MPPED1O15442 326 aa13.81□□□□□ -0.2
UPK3BP1-201ENST00000428678 LY6G6CO95867 125 aa13.81□□□□□ -0.2
UPK3BP1-201ENST00000428678 OR9G9P0C7N8 305 aa13.81□□□□□ -0.2
UPK3BP1-201ENST00000428678 QRFPP83859 136 aa13.81□□□□□ -0.2
UPK3BP1-201ENST00000428678 RHOGP84095 191 aa13.81□□□□□ -0.2
UPK3BP1-201ENST00000428678 TTC23Q5W5X9 447 aa13.81□□□□□ -0.2
UPK3BP1-201ENST00000428678 LPAR5Q9H1C0 372 aa13.81□□□□□ -0.2
UPK3BP1-201ENST00000428678 AKIP1Q9NQ31 210 aa13.81□□□□□ -0.2
UPK3BP1-201ENST00000428678 BPNT1O95861 308 aa13.8□□□□□ -0.2
UPK3BP1-201ENST00000428678 PRH1P02810 166 aa13.8□□□□□ -0.2
UPK3BP1-201ENST00000428678 TNXAQ16473 311 aa13.8□□□□□ -0.2
UPK3BP1-201ENST00000428678 SETD9Q8NE22 299 aa13.8□□□□□ -0.2
UPK3BP1-201ENST00000428678 PHYHIPQ92561 330 aa13.8□□□□□ -0.2
UPK3BP1-201ENST00000428678 URM1Q9BTM9 101 aaKnown RBP13.8□□□□□ -0.2
UPK3BP1-201ENST00000428678 OR2D2Q9H210 308 aa13.8□□□□□ -0.2
UPK3BP1-201ENST00000428678 FAM223BA6NKX1 122 aa13.79□□□□□ -0.2
UPK3BP1-201ENST00000428678 SRRM4A7MD48 611 aaKnown RBP13.79□□□□□ -0.2
UPK3BP1-201ENST00000428678 TUSC2O75896 110 aa13.79□□□□□ -0.2
UPK3BP1-201ENST00000428678 SRMP19623 302 aa13.79□□□□□ -0.2
UPK3BP1-201ENST00000428678 ATP5G2Q06055 141 aa13.79□□□□□ -0.2
UPK3BP1-201ENST00000428678 P2RY14Q15391 338 aa13.79□□□□□ -0.2
UPK3BP1-201ENST00000428678 RTL8BQ17RB0 113 aa13.79□□□□□ -0.2
UPK3BP1-201ENST00000428678 DEFB114Q30KQ6 69 aa13.79□□□□□ -0.2
UPK3BP1-201ENST00000428678 FAM223AQ8IWN6 122 aa13.79□□□□□ -0.2
UPK3BP1-201ENST00000428678 OR6M1Q8NGM8 313 aa13.79□□□□□ -0.2
UPK3BP1-201ENST00000428678 CMSS1Q9BQ75 279 aaKnown RBP13.79□□□□□ -0.2
UPK3BP1-201ENST00000428678 ZNF230Q9UIE0 474 aaPredicted RBP13.79□□□□□ -0.2
UPK3BP1-201ENST00000428678 CXorf65A6NEN9 183 aa13.78□□□□□ -0.2
UPK3BP1-201ENST00000428678 TRDCB7Z8K6 153 aa13.78□□□□□ -0.2
UPK3BP1-201ENST00000428678 PMS2P11Q13670 270 aa13.78□□□□□ -0.2
UPK3BP1-201ENST00000428678 MRGPRG-AS1Q2M3A8 158 aa13.78□□□□□ -0.2
UPK3BP1-201ENST00000428678 VMA21Q3ZAQ7 101 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms