RNA–Protein interactions for RNA: ENST00000428659.1

TIMM9P3-201, Transcript of TIMM9 pseudogene 3, humanhuman

BASIC

Gene TIMM9P3, Length 274 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM9P3-201ENST00000428659 C1orf109Q9NX04 203 aa0.58□□□□□ -2.32
TIMM9P3-201ENST00000428659 EMC3Q9P0I2 261 aa0.58□□□□□ -2.32
TIMM9P3-201ENST00000428659 PRO2289Q9P1D8 64 aa0.58□□□□□ -2.32
TIMM9P3-201ENST00000428659 TAAR3PQ9P1P4 343 aa0.58□□□□□ -2.32
TIMM9P3-201ENST00000428659 ENPP5Q9UJA9 477 aa0.58□□□□□ -2.32
TIMM9P3-201ENST00000428659 HHLA3Q9XRX5 114 aa0.58□□□□□ -2.32
TIMM9P3-201ENST00000428659 TIMM9Q9Y5J7 89 aa0.58□□□□□ -2.32
TIMM9P3-201ENST00000428659 LRPPRCP42704 1394 aaKnown RBP0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 COL18A1P39060 1754 aa0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 RGS12O14924 1447 aa0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 NPATQ14207 1427 aa0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 DENND4BO75064 1496 aaPredicted RBP0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 TEX50A0A1B0GTY4 177 aa0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 TMEM213A2RRL7 107 aa0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 C5orf49A4QMS7 147 aa0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 BHLHE40O14503 412 aa0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 ATP8B1O43520 1251 aa0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 MPZL2O60487 215 aa0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 ZNF728P0DKX0 622 aa0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 OR10J1P30954 320 aa0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 AKR1C3P42330 323 aa0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 GABRA2P47869 451 aa0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 EVX1P49640 407 aa0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 RPL14P50914 215 aaKnown RBP0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 PSMD7P51665 324 aa0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 OR10A3P58181 314 aa0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 HIST1H4AP62805 103 aaKnown RBP0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 PRB3Q04118 309 aaPredicted RBP0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 SLAMF1Q13291 335 aa0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 TMEM31Q5JXX7 168 aa0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 OR10K2Q6IF99 312 aa0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 C2orf91Q6ZV80 131 aa0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 ATP5L2Q7Z4Y8 100 aa0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 LFNGQ8NES3 379 aa0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 SUN5Q8TC36 379 aa0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 RNASEH2CQ8TDP1 164 aaKnown RBP0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 Q8WTZ3 238 aa0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 TMIGD2Q96BF3 282 aa0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 HES4Q9HCC6 221 aa0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 MED9Q9NWA0 146 aa0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 TRPM3Q9HCF6 1732 aaPredicted RBP0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 MYO15BQ96JP2 1530 aa0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 ZNF532Q9HCE3 1301 aa0.57□□□□□ -2.32
TIMM9P3-201ENST00000428659 NUP160Q12769 1436 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 CCDC88CQ9P219 2028 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 KDM5BQ9UGL1 1544 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 TMSB15BA0A087X1C1 80 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 IGKV3D-7A0A0C4DH55 119 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 IGKV3OR2-268A0A0C4DH90 116 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 HSBP1L1C9JCN9 74 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 MRASO14807 208 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 TOX3O15405 576 aaPredicted RBP0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 ATP6V1G2O95670 118 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 SERPINA7P05543 415 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 BPGMP07738 259 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 OCMP0CE72 109 aaPredicted RBP0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 DDTP30046 118 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 LCN1P31025 176 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 G6PCP35575 357 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 HAAOP46952 286 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 SERPINB10P48595 397 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 RBM11P57052 281 aaKnown RBP0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 TMEM33P57088 247 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 TBPL1P62380 186 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 HERVK_113P63121 156 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 FABP5Q01469 135 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 TMED1Q13445 227 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 MIAQ16674 131 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 C9orf64Q5T6V5 341 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 SDHAF4Q5VUM1 108 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 LCN8Q6JVE9 175 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 DRAM2Q6UX65 266 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 LRRC28Q86X40 367 aaPredicted RBP0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 BAP18Q8IXM2 172 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 LRRC34Q8IZ02 419 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 BLIDQ8IZY5 108 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 TMEM86AQ8N2M4 240 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 OR5L1Q8NGL2 311 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 CLDND2Q8NHS1 167 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 JOSD2Q8TAC2 188 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 C10orf105Q8TEF2 133 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 SMCR5Q8TEV8 140 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 PACRGQ96M98 296 aaPredicted RBP0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 DCUN1D5Q9BTE7 237 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 MROQ9BYG7 248 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 NDEL1Q9GZM8 345 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 NSRP1Q9H0G5 558 aaKnown RBP0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 XAGE1AQ9HD64 81 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 TREM1Q9NP99 234 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 FKBP14Q9NWM8 211 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 POFUT2Q9Y2G5 429 aa0.56□□□□□ -2.32
TIMM9P3-201ENST00000428659 NOTCH1P46531 2555 aa0.55□□□□□ -2.32
TIMM9P3-201ENST00000428659 FBN2P35556 2912 aa0.55□□□□□ -2.32
TIMM9P3-201ENST00000428659 IGKV3-7A0A075B6H7 116 aa0.55□□□□□ -2.32
TIMM9P3-201ENST00000428659 A0A1B0GVG6 124 aa0.55□□□□□ -2.32
TIMM9P3-201ENST00000428659 RFPL4AA6NLU0 287 aa0.55□□□□□ -2.32
TIMM9P3-201ENST00000428659 HMSDA8MTL9 139 aa0.55□□□□□ -2.32
TIMM9P3-201ENST00000428659 FAM25EA8MYX2 175 aa0.55□□□□□ -2.32
TIMM9P3-201ENST00000428659 FTCDNL1E5RQL4 147 aa0.55□□□□□ -2.32
TIMM9P3-201ENST00000428659 RFPL4AL1F8VTS6 287 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms