RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 ZNF816Q0VGE8 651 aaPredicted RBP6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 CBX3Q13185 183 aa6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 PPP1R1AQ13522 171 aa6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 OXA1LQ15070 435 aa6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 SLC9A3R2Q15599 337 aa6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 RTL8BQ17RB0 113 aa6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 LDLRAD2Q5SZI1 272 aa6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 GLDNQ6ZMI3 551 aaPredicted RBP6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 ZNF66Q6ZN08 573 aa6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 Q71RC1 249 aaPredicted RBP6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 SLC25A42Q86VD7 318 aa6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 OR8H3Q8N146 312 aa6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 CASTOR1Q8WTX7 329 aa6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 CAPSLQ8WWF8 208 aa6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 C22orf15Q8WYQ4 148 aa6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 TMEM230Q96A57 120 aa6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 SEC22CQ9BRL7 303 aa6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 MARVELD1Q9BSK0 173 aa6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 NAA60Q9H7X0 242 aa6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 GAB2Q9UQC2 676 aa6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 PRELID3BQ9Y3B1 194 aa6.4□□□□□ -1.38
HMGA1P4-201ENST00000428643 CR1P17927 2039 aa6.4□□□□□ -1.39
HMGA1P4-201ENST00000428643 MED13LQ71F56 2210 aa6.4□□□□□ -1.39
HMGA1P4-201ENST00000428643 C2CD3Q4AC94 2353 aa6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 LINC00473A8K010 186 aa6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 H0Y980 276 aa6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 PRAF2O60831 178 aa6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 FCGR3BO75015 233 aa6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 PROP1O75360 226 aa6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 DHFRP00374 187 aa6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 IFNA2P01563 188 aa6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 SERPINE2P07093 398 aa6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 OR5AC1P0C628 307 aa6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 CT45A6P0DMU7 189 aa6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 CT45A5P0DMU8 189 aa6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 CT45A7P0DMV0 189 aa6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 VSIG10L2P0DP72 767 aa6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 ANXA3P12429 323 aa6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 F2RP25116 425 aa6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 KIR2DS2P43631 304 aa6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 BPIFB3P59826 476 aa6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 UBE2MP61081 183 aaKnown RBP6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 RPL30P62888 115 aaKnown RBP6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 DHRS2Q13268 280 aa6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 EIF4EBP1Q13541 118 aaPredicted RBP6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 TATDN3Q17R31 274 aa6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 SP6Q3SY56 376 aa6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 TMEM128Q5BJH2 165 aa6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 LYG2Q86SG7 212 aa6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 SPAG16Q8N0X2 631 aa6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 DYNAPQ8N1N2 210 aa6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 ZNF383Q8NA42 475 aa6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 OR4S2Q8NH73 311 aa6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 MALSU1Q96EH3 234 aa6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 TP53RKQ96S44 253 aa6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 NABP2Q9BQ15 211 aa6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 GPN1Q9HCN4 374 aaPredicted RBP6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 SLC35D1Q9NTN3 355 aa6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 KCNIP3Q9Y2W7 256 aa6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 WASHC3Q9Y3C0 194 aa6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 SOX21Q9Y651 276 aaPredicted RBP6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 ZANQ9Y493 2812 aa6.39□□□□□ -1.39
HMGA1P4-201ENST00000428643 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 MDFIC2A0A1B0GVS7 189 aa6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 C9orf170A2RU37 121 aa6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 H0YJW9 148 aa6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 RAMP3O60896 148 aa6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 B3GALNT1O75752 331 aa6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 S1PR2O95136 353 aa6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 SFT2D2O95562 160 aa6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 CRYZL1O95825 349 aa6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 OR4E1P0C645 316 aa6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 BRS3P32247 399 aa6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 RAG2P55895 527 aa6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 ERVK-16P61578 105 aa6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 SUPT4H1P63272 117 aaKnown RBP6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 SRPXP78539 464 aa6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 TAGLNQ01995 201 aaKnown RBP6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 SCGB2A2Q13296 93 aa6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 HES1Q14469 280 aa6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 DEFB112Q30KQ8 113 aa6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 DHRS7BQ6IAN0 325 aaPredicted RBP6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 PDPNQ86YL7 162 aa6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 BCL6BQ8N143 479 aaPredicted RBP6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 OR52B4Q8NGK2 314 aa6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 RNASE11Q8TAA1 199 aaKnown RBP6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 CD300LFQ8TDQ1 290 aa6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 ZNF431Q8TF32 576 aaPredicted RBP6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 DDB2Q92466 427 aa6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 ZDHHC16Q969W1 377 aa6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 AJUBAQ96IF1 538 aa6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 TMEM222Q9H0R3 208 aa6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 GSX1Q9H4S2 264 aaPredicted RBP6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 PRR13Q9NZ81 148 aa6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 CDC42EP3Q9UKI2 254 aa6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 ALG5Q9Y673 324 aa6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 F8P00451 2351 aa6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 NIPBLQ6KC79 2804 aaeCLIP6.38□□□□□ -1.39
HMGA1P4-201ENST00000428643 ACANP16112 2415 aa6.37□□□□□ -1.39
HMGA1P4-201ENST00000428643 CSPG4Q6UVK1 2322 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms