RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 TRAV10A0A0B4J240 114 aa8.62□□□□□ -1.03
DDX39B-208ENST00000428098 SRRM4A7MD48 611 aaKnown RBP8.62□□□□□ -1.03
DDX39B-208ENST00000428098 OR2J3O76001 311 aa8.62□□□□□ -1.03
DDX39B-208ENST00000428098 T-ENOLP0DO92 83 aa8.62□□□□□ -1.03
DDX39B-208ENST00000428098 C15orf32Q32M92 178 aa8.62□□□□□ -1.03
DDX39B-208ENST00000428098 SLC22A6Q4U2R8 563 aa8.62□□□□□ -1.03
DDX39B-208ENST00000428098 ZNF585BQ52M93 769 aa8.62□□□□□ -1.03
DDX39B-208ENST00000428098 C1orf134Q5TEV5 83 aa8.62□□□□□ -1.03
DDX39B-208ENST00000428098 SIGIRRQ6IA17 410 aa8.62□□□□□ -1.03
DDX39B-208ENST00000428098 Q6ZRM9 215 aa8.62□□□□□ -1.03
DDX39B-208ENST00000428098 ZNF554Q86TJ5 538 aa8.62□□□□□ -1.03
DDX39B-208ENST00000428098 NR2C2APQ86WQ0 139 aa8.62□□□□□ -1.03
DDX39B-208ENST00000428098 DHFR2Q86XF0 187 aa8.62□□□□□ -1.03
DDX39B-208ENST00000428098 NECAP1Q8NC96 275 aa8.62□□□□□ -1.03
DDX39B-208ENST00000428098 GALMQ96C23 342 aa8.62□□□□□ -1.03
DDX39B-208ENST00000428098 PHB2Q99623 299 aa8.62□□□□□ -1.03
DDX39B-208ENST00000428098 SULT4A1Q9BR01 284 aa8.62□□□□□ -1.03
DDX39B-208ENST00000428098 TAS2R4Q9NYW5 299 aa8.62□□□□□ -1.03
DDX39B-208ENST00000428098 S4R3C0 116 aa8.62□□□□□ -1.03
DDX39B-208ENST00000428098 ZAR1LA6NP61 321 aa8.61□□□□□ -1.03
DDX39B-208ENST00000428098 EPM2AB3EWF7 344 aa8.61□□□□□ -1.03
DDX39B-208ENST00000428098 J3QLW9 94 aa8.61□□□□□ -1.03
DDX39B-208ENST00000428098 GNGT2O14610 69 aa8.61□□□□□ -1.03
DDX39B-208ENST00000428098 SLC16A6O15403 523 aa8.61□□□□□ -1.03
DDX39B-208ENST00000428098 SCTP09683 121 aa8.61□□□□□ -1.03
DDX39B-208ENST00000428098 GTF2F2P13984 249 aa8.61□□□□□ -1.03
DDX39B-208ENST00000428098 ZNF19P17023 458 aa8.61□□□□□ -1.03
DDX39B-208ENST00000428098 ATP6V1E1P36543 226 aa8.61□□□□□ -1.03
DDX39B-208ENST00000428098 FAM106AQ4KMX7 169 aa8.61□□□□□ -1.03
DDX39B-208ENST00000428098 SOHLH1Q5JUK2 328 aa8.61□□□□□ -1.03
DDX39B-208ENST00000428098 SLC25A30Q5SVS4 291 aa8.61□□□□□ -1.03
DDX39B-208ENST00000428098 C19orf35Q6ZS72 473 aa8.61□□□□□ -1.03
DDX39B-208ENST00000428098 Q8NAQ8 132 aa8.61□□□□□ -1.03
DDX39B-208ENST00000428098 CD300LFQ8TDQ1 290 aa8.61□□□□□ -1.03
DDX39B-208ENST00000428098 NSL1Q96IY1 281 aa8.61□□□□□ -1.03
DDX39B-208ENST00000428098 OR14A2Q96R54 314 aa8.61□□□□□ -1.03
DDX39B-208ENST00000428098 SPAG8Q99932 426 aaPredicted RBP8.61□□□□□ -1.03
DDX39B-208ENST00000428098 CHRDL1Q9BU40 450 aa8.61□□□□□ -1.03
DDX39B-208ENST00000428098 C5orf66Q9H5L9 145 aa8.61□□□□□ -1.03
DDX39B-208ENST00000428098 SPACA1Q9HBV2 294 aa8.61□□□□□ -1.03
DDX39B-208ENST00000428098 EXOSC1Q9Y3B2 195 aaKnown RBP8.61□□□□□ -1.03
DDX39B-208ENST00000428098 E9PI62 339 aa8.6□□□□□ -1.03
DDX39B-208ENST00000428098 J3QRE1 110 aa8.6□□□□□ -1.03
DDX39B-208ENST00000428098 TSPAN4O14817 238 aa8.6□□□□□ -1.03
DDX39B-208ENST00000428098 CA11O75493 328 aa8.6□□□□□ -1.03
DDX39B-208ENST00000428098 GPX5O75715 221 aa8.6□□□□□ -1.03
DDX39B-208ENST00000428098 BAG2O95816 211 aa8.6□□□□□ -1.03
DDX39B-208ENST00000428098 ADMP35318 185 aa8.6□□□□□ -1.03
DDX39B-208ENST00000428098 ARL3P36405 182 aa8.6□□□□□ -1.03
DDX39B-208ENST00000428098 MED21Q13503 144 aa8.6□□□□□ -1.03
DDX39B-208ENST00000428098 HMGN3Q15651 99 aa8.6□□□□□ -1.03
DDX39B-208ENST00000428098 CLEC19AQ6UXS0 136 aa8.6□□□□□ -1.03
DDX39B-208ENST00000428098 ADGRG5Q8IZF4 528 aa8.6□□□□□ -1.03
DDX39B-208ENST00000428098 SETD9Q8NE22 299 aa8.6□□□□□ -1.03
DDX39B-208ENST00000428098 IL1F10Q8WWZ1 152 aa8.6□□□□□ -1.03
DDX39B-208ENST00000428098 PDCD1LG2Q9BQ51 273 aa8.6□□□□□ -1.03
DDX39B-208ENST00000428098 C11orf54Q9H0W9 315 aaPredicted RBP8.6□□□□□ -1.03
DDX39B-208ENST00000428098 ISG20L2Q9H9L3 353 aaKnown RBP8.6□□□□□ -1.03
DDX39B-208ENST00000428098 RPL36Q9Y3U8 105 aaKnown RBP8.6□□□□□ -1.03
DDX39B-208ENST00000428098 AMBPP02760 352 aa8.59□□□□□ -1.03
DDX39B-208ENST00000428098 CD74P04233 296 aa8.59□□□□□ -1.03
DDX39B-208ENST00000428098 ZNF93P35789 620 aaPredicted RBP8.59□□□□□ -1.03
DDX39B-208ENST00000428098 SOX2P48431 317 aa8.59□□□□□ -1.03
DDX39B-208ENST00000428098 MED22Q15528 200 aa8.59□□□□□ -1.03
DDX39B-208ENST00000428098 PDPNQ86YL7 162 aa8.59□□□□□ -1.03
DDX39B-208ENST00000428098 TTC9CQ8N5M4 171 aa8.59□□□□□ -1.03
DDX39B-208ENST00000428098 ORAI1Q96D31 301 aa8.59□□□□□ -1.03
DDX39B-208ENST00000428098 CPNE2Q96FN4 548 aaPredicted RBP8.59□□□□□ -1.03
DDX39B-208ENST00000428098 JAM3Q9BX67 310 aa8.59□□□□□ -1.03
DDX39B-208ENST00000428098 ARL8BQ9NVJ2 186 aa8.59□□□□□ -1.03
DDX39B-208ENST00000428098 MRPL27Q9P0M9 148 aaKnown RBP8.59□□□□□ -1.03
DDX39B-208ENST00000428098 STEAP1Q9UHE8 339 aa8.59□□□□□ -1.03
DDX39B-208ENST00000428098 LRRC42Q9Y546 428 aa8.59□□□□□ -1.03
DDX39B-208ENST00000428098 VPS13BQ7Z7G8 4022 aa8.58□□□□□ -1.04
DDX39B-208ENST00000428098 ELOA3CA0A087WX78 387 aaPredicted RBP8.58□□□□□ -1.04
DDX39B-208ENST00000428098 IFNA10P01566 189 aa8.58□□□□□ -1.04
DDX39B-208ENST00000428098 FUT3P21217 361 aa8.58□□□□□ -1.04
DDX39B-208ENST00000428098 PRSS8Q16651 343 aa8.58□□□□□ -1.04
DDX39B-208ENST00000428098 OR4A47Q6IF82 309 aa8.58□□□□□ -1.04
DDX39B-208ENST00000428098 ZNF767PQ75MW2 155 aa8.58□□□□□ -1.04
DDX39B-208ENST00000428098 CANT1Q8WVQ1 401 aa8.58□□□□□ -1.04
DDX39B-208ENST00000428098 SRSF12Q8WXF0 261 aaKnown RBP8.58□□□□□ -1.04
DDX39B-208ENST00000428098 MARC2Q969Z3 335 aa8.58□□□□□ -1.04
DDX39B-208ENST00000428098 C4orf36Q96KX1 117 aa8.58□□□□□ -1.04
DDX39B-208ENST00000428098 S100A13Q99584 98 aa8.58□□□□□ -1.04
DDX39B-208ENST00000428098 BANF2Q9H503 90 aa8.58□□□□□ -1.04
DDX39B-208ENST00000428098 PAK1IP1Q9NWT1 392 aaPredicted RBP8.58□□□□□ -1.04
DDX39B-208ENST00000428098 DEFB131BA0A096LNP1 70 aa8.57□□□□□ -1.04
DDX39B-208ENST00000428098 IGHV4-28A0A0C4DH34 117 aa8.57□□□□□ -1.04
DDX39B-208ENST00000428098 IGHV3-35A0A0C4DH35 117 aa8.57□□□□□ -1.04
DDX39B-208ENST00000428098 DAPL1A0PJW8 107 aa8.57□□□□□ -1.04
DDX39B-208ENST00000428098 ITGB1BP1O14713 200 aa8.57□□□□□ -1.04
DDX39B-208ENST00000428098 MPPED1O15442 326 aa8.57□□□□□ -1.04
DDX39B-208ENST00000428098 ZNF780AO75290 641 aaPredicted RBP8.57□□□□□ -1.04
DDX39B-208ENST00000428098 POLR2IP36954 125 aaKnown RBP8.57□□□□□ -1.04
DDX39B-208ENST00000428098 TNXAQ16473 311 aa8.57□□□□□ -1.04
DDX39B-208ENST00000428098 C12orf74Q32Q52 190 aa8.57□□□□□ -1.04
DDX39B-208ENST00000428098 FAM209BQ5JX69 171 aa8.57□□□□□ -1.04
DDX39B-208ENST00000428098 DDI2Q5TDH0 399 aa8.57□□□□□ -1.04
DDX39B-208ENST00000428098 IDO2Q6ZQW0 420 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms