RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 PARP11Q9NR21 331 aa14.96□□□□□ -0.01
COL9A2-204ENST00000427563 NECAP2Q9NVZ3 263 aa14.96□□□□□ -0.01
COL9A2-204ENST00000427563 NUDT19A8MXV4 375 aa14.95□□□□□ -0.02
COL9A2-204ENST00000427563 OR8U9P0C7N5 309 aa14.95□□□□□ -0.02
COL9A2-204ENST00000427563 MC5RP33032 325 aa14.95□□□□□ -0.02
COL9A2-204ENST00000427563 MYCNOSP40205 109 aa14.95□□□□□ -0.02
COL9A2-204ENST00000427563 RORCP51449 518 aa14.95□□□□□ -0.02
COL9A2-204ENST00000427563 SCAND1P57086 179 aa14.95□□□□□ -0.02
COL9A2-204ENST00000427563 KRTAP10-11P60412 298 aa14.95□□□□□ -0.02
COL9A2-204ENST00000427563 ARFRP1Q13795 201 aa14.95□□□□□ -0.02
COL9A2-204ENST00000427563 KIR2DS1Q14954 304 aa14.95□□□□□ -0.02
COL9A2-204ENST00000427563 SRSF7Q16629 238 aaKnown RBP eCLIP14.95□□□□□ -0.02
COL9A2-204ENST00000427563 ZNF260Q3ZCT1 412 aa14.95□□□□□ -0.02
COL9A2-204ENST00000427563 CXorf66Q5JRM2 361 aaPredicted RBP14.95□□□□□ -0.02
COL9A2-204ENST00000427563 OR8U1Q8NH10 309 aa14.95□□□□□ -0.02
COL9A2-204ENST00000427563 DYNC2LI1Q8TCX1 351 aa14.95□□□□□ -0.02
COL9A2-204ENST00000427563 NUDCD2Q8WVJ2 157 aa14.95□□□□□ -0.02
COL9A2-204ENST00000427563 RCC1LQ96I51 464 aaKnown RBP14.95□□□□□ -0.02
COL9A2-204ENST00000427563 GON7Q9BXV9 100 aa14.95□□□□□ -0.02
COL9A2-204ENST00000427563 OR2D2Q9H210 308 aa14.95□□□□□ -0.02
COL9A2-204ENST00000427563 TPSG1Q9NRR2 321 aa14.95□□□□□ -0.02
COL9A2-204ENST00000427563 SDHAF2Q9NX18 166 aa14.95□□□□□ -0.02
COL9A2-204ENST00000427563 NDUFA13Q9P0J0 144 aa14.95□□□□□ -0.02
COL9A2-204ENST00000427563 ZNF221Q9UK13 617 aa14.95□□□□□ -0.02
COL9A2-204ENST00000427563 GAB2Q9UQC2 676 aa14.95□□□□□ -0.02
COL9A2-204ENST00000427563 H7C2Y5 167 aa14.94□□□□□ -0.02
COL9A2-204ENST00000427563 M0R1X1 148 aa14.94□□□□□ -0.02
COL9A2-204ENST00000427563 SSX5O60225 188 aa14.94□□□□□ -0.02
COL9A2-204ENST00000427563 SOX15O60248 233 aa14.94□□□□□ -0.02
COL9A2-204ENST00000427563 DIRAS3O95661 229 aa14.94□□□□□ -0.02
COL9A2-204ENST00000427563 IGLV1-40P01703 118 aa14.94□□□□□ -0.02
COL9A2-204ENST00000427563 SLC6A1P30531 599 aa14.94□□□□□ -0.02
COL9A2-204ENST00000427563 CDX1P47902 265 aaPredicted RBP14.94□□□□□ -0.02
COL9A2-204ENST00000427563 CRIP2P52943 208 aaPredicted RBP14.94□□□□□ -0.02
COL9A2-204ENST00000427563 CX3CL1P78423 397 aa14.94□□□□□ -0.02
COL9A2-204ENST00000427563 MRPS15P82914 257 aaKnown RBP14.94□□□□□ -0.02
COL9A2-204ENST00000427563 HACD4Q5VWC8 232 aa14.94□□□□□ -0.02
COL9A2-204ENST00000427563 H1FOOQ8IZA3 346 aaPredicted RBP14.94□□□□□ -0.02
COL9A2-204ENST00000427563 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.94□□□□□ -0.02
COL9A2-204ENST00000427563 KCTD12Q96CX2 325 aaKnown RBP14.94□□□□□ -0.02
COL9A2-204ENST00000427563 KIAA1456Q9P272 454 aa14.94□□□□□ -0.02
COL9A2-204ENST00000427563 ETV7Q9Y603 341 aa14.94□□□□□ -0.02
COL9A2-204ENST00000427563 TMEM235A6NFC5 223 aa14.93□□□□□ -0.02
COL9A2-204ENST00000427563 DTYMKP23919 212 aa14.93□□□□□ -0.02
COL9A2-204ENST00000427563 PSG5Q15238 335 aa14.93□□□□□ -0.02
COL9A2-204ENST00000427563 MINDY2Q8NBR6 621 aa14.93□□□□□ -0.02
COL9A2-204ENST00000427563 OR10J5Q8NHC4 309 aa14.93□□□□□ -0.02
COL9A2-204ENST00000427563 RHBDL2Q9NX52 303 aa14.93□□□□□ -0.02
COL9A2-204ENST00000427563 CCDC59Q9P031 241 aaKnown RBP14.93□□□□□ -0.02
COL9A2-204ENST00000427563 SPATA2Q9UM82 520 aa14.93□□□□□ -0.02
COL9A2-204ENST00000427563 TRAV41A0A0B4J266 112 aa14.92□□□□□ -0.02
COL9A2-204ENST00000427563 CCL24O00175 119 aa14.92□□□□□ -0.02
COL9A2-204ENST00000427563 RBBP9O75884 186 aa14.92□□□□□ -0.02
COL9A2-204ENST00000427563 IGLV2-23P01705 113 aa14.92□□□□□ -0.02
COL9A2-204ENST00000427563 GSTP1P09211 210 aaKnown RBP14.92□□□□□ -0.02
COL9A2-204ENST00000427563 ZNF182P17025 639 aaPredicted RBP14.92□□□□□ -0.02
COL9A2-204ENST00000427563 HOXD3P31249 432 aaPredicted RBP14.92□□□□□ -0.02
COL9A2-204ENST00000427563 SSBP2P81877 361 aaPredicted RBP14.92□□□□□ -0.02
COL9A2-204ENST00000427563 DGCR14Q96DF8 476 aaKnown RBP14.92□□□□□ -0.02
COL9A2-204ENST00000427563 CLCC1Q96S66 551 aa14.92□□□□□ -0.02
COL9A2-204ENST00000427563 RNF5Q99942 180 aa14.92□□□□□ -0.02
COL9A2-204ENST00000427563 GNB4Q9HAV0 340 aa14.92□□□□□ -0.02
COL9A2-204ENST00000427563 NUBP2Q9Y5Y2 271 aa14.92□□□□□ -0.02
COL9A2-204ENST00000427563 A6NHS1 94 aa14.91□□□□□ -0.02
COL9A2-204ENST00000427563 OR5H8P0DN80 308 aa14.91□□□□□ -0.02
COL9A2-204ENST00000427563 TALDO1P37837 337 aa14.91□□□□□ -0.02
COL9A2-204ENST00000427563 EGFEM1PQ0D2K5 195 aa14.91□□□□□ -0.02
COL9A2-204ENST00000427563 ASPHD1Q5U4P2 390 aa14.91□□□□□ -0.02
COL9A2-204ENST00000427563 ZNF660Q6AZW8 331 aaPredicted RBP14.91□□□□□ -0.02
COL9A2-204ENST00000427563 REC114Q7Z4M0 266 aa14.91□□□□□ -0.02
COL9A2-204ENST00000427563 PDPNQ86YL7 162 aa14.91□□□□□ -0.02
COL9A2-204ENST00000427563 ZNF491Q8N8L2 437 aa14.91□□□□□ -0.02
COL9A2-204ENST00000427563 CASTOR1Q8WTX7 329 aa14.91□□□□□ -0.02
COL9A2-204ENST00000427563 ACOT12Q8WYK0 555 aa14.91□□□□□ -0.02
COL9A2-204ENST00000427563 FAM103A1Q9BTL3 118 aaKnown RBP14.91□□□□□ -0.02
COL9A2-204ENST00000427563 ST6GALNAC5Q9BVH7 336 aa14.91□□□□□ -0.02
COL9A2-204ENST00000427563 SLC35D1Q9NTN3 355 aa14.91□□□□□ -0.02
COL9A2-204ENST00000427563 METTL1Q9UBP6 276 aaKnown RBP14.91□□□□□ -0.02
COL9A2-204ENST00000427563 I3L521 148 aa14.9□□□□□ -0.02
COL9A2-204ENST00000427563 K7EIL1 84 aa14.9□□□□□ -0.02
COL9A2-204ENST00000427563 ARPC1BO15143 372 aaKnown RBP14.9□□□□□ -0.02
COL9A2-204ENST00000427563 CA2P00918 260 aa14.9□□□□□ -0.02
COL9A2-204ENST00000427563 CRYGBP07316 175 aa14.9□□□□□ -0.02
COL9A2-204ENST00000427563 FHL3Q13643 280 aa14.9□□□□□ -0.02
COL9A2-204ENST00000427563 ARL6IP1Q15041 203 aa14.9□□□□□ -0.02
COL9A2-204ENST00000427563 ECSCRQ19T08 205 aa14.9□□□□□ -0.02
COL9A2-204ENST00000427563 MRGPRG-AS1Q2M3A8 158 aa14.9□□□□□ -0.02
COL9A2-204ENST00000427563 C4orf3Q8WVX3 66 aa14.9□□□□□ -0.02
COL9A2-204ENST00000427563 DDB2Q92466 427 aa14.9□□□□□ -0.02
COL9A2-204ENST00000427563 AP3S1Q92572 193 aa14.9□□□□□ -0.02
COL9A2-204ENST00000427563 GINS4Q9BRT9 223 aa14.9□□□□□ -0.02
COL9A2-204ENST00000427563 SRRM4A7MD48 611 aaKnown RBP14.89□□□□□ -0.03
COL9A2-204ENST00000427563 LINC00473A8K010 186 aa14.89□□□□□ -0.03
COL9A2-204ENST00000427563 DUS4LO95620 317 aaKnown RBP14.89□□□□□ -0.03
COL9A2-204ENST00000427563 RPS16P62249 146 aaKnown RBP14.89□□□□□ -0.03
COL9A2-204ENST00000427563 MRAPQ8TCY5 172 aa14.89□□□□□ -0.03
COL9A2-204ENST00000427563 SLIRPQ9GZT3 109 aaKnown RBP14.89□□□□□ -0.03
COL9A2-204ENST00000427563 COMMD3Q9UBI1 195 aa14.89□□□□□ -0.03
COL9A2-204ENST00000427563 DNAH9Q9NYC9 4486 aa14.88□□□□□ -0.03
COL9A2-204ENST00000427563 IGKV1D-13A0A0B4J2D9 117 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms