RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 PRKNO60260 465 aaPredicted RBP12.53□□□□□ -0.4
PTPN13-203ENST00000427191 MARF1Q9Y4F3 1742 aaKnown RBP12.53□□□□□ -0.4
PTPN13-203ENST00000427191 TMSB15BA0A087X1C1 80 aa12.52□□□□□ -0.4
PTPN13-203ENST00000427191 TGIF2-C20orf24A0A0A6YYL0 155 aa12.52□□□□□ -0.4
PTPN13-203ENST00000427191 TMEM262E9PQX1 116 aa12.52□□□□□ -0.4
PTPN13-203ENST00000427191 NXPH1P58417 271 aa12.52□□□□□ -0.4
PTPN13-203ENST00000427191 OR4C13Q8NGP0 309 aa12.52□□□□□ -0.4
PTPN13-203ENST00000427191 OR1K1Q8NGR3 316 aa12.52□□□□□ -0.4
PTPN13-203ENST00000427191 NUDT11Q96G61 164 aa12.52□□□□□ -0.4
PTPN13-203ENST00000427191 MS4A7Q9GZW8 240 aaPredicted RBP12.52□□□□□ -0.4
PTPN13-203ENST00000427191 COL11A1P12107 1806 aaPredicted RBP12.52□□□□□ -0.4
PTPN13-203ENST00000427191 ZNF658BQ4V348 819 aaPredicted RBP12.52□□□□□ -0.4
PTPN13-203ENST00000427191 TNFRSF19Q9NS68 423 aa12.52□□□□□ -0.4
PTPN13-203ENST00000427191 J3KRW8 73 aa12.52□□□□□ -0.4
PTPN13-203ENST00000427191 GGACTQ9BVM4 153 aa12.52□□□□□ -0.4
PTPN13-203ENST00000427191 TINAGQ9UJW2 476 aa12.52□□□□□ -0.4
PTPN13-203ENST00000427191 PATJQ8NI35 1801 aa12.52□□□□□ -0.41
PTPN13-203ENST00000427191 AKAP6Q13023 2319 aa12.52□□□□□ -0.41
PTPN13-203ENST00000427191 GDF9O60383 454 aa12.52□□□□□ -0.41
PTPN13-203ENST00000427191 PEX11BO96011 259 aa12.52□□□□□ -0.41
PTPN13-203ENST00000427191 BGLAPP02818 100 aa12.52□□□□□ -0.41
PTPN13-203ENST00000427191 ZNF146Q15072 292 aa12.52□□□□□ -0.41
PTPN13-203ENST00000427191 LRTM2Q8N967 370 aa12.52□□□□□ -0.41
PTPN13-203ENST00000427191 PRSS27Q9BQR3 290 aa12.52□□□□□ -0.41
PTPN13-203ENST00000427191 PKIBQ9C010 78 aa12.52□□□□□ -0.41
PTPN13-203ENST00000427191 PQLC2LA1A4F0 135 aa12.52□□□□□ -0.41
PTPN13-203ENST00000427191 SPINK14Q6IE38 97 aa12.52□□□□□ -0.41
PTPN13-203ENST00000427191 PCGF1Q9BSM1 259 aa12.52□□□□□ -0.41
PTPN13-203ENST00000427191 MPTX1A8MV57 137 aa12.52□□□□□ -0.41
PTPN13-203ENST00000427191 MIXL1Q9H2W2 232 aa12.51□□□□□ -0.41
PTPN13-203ENST00000427191 SLC25A20O43772 301 aa12.51□□□□□ -0.41
PTPN13-203ENST00000427191 FSCN3Q9NQT6 498 aa12.51□□□□□ -0.41
PTPN13-203ENST00000427191 KLK13Q9UKR3 277 aa12.51□□□□□ -0.41
PTPN13-203ENST00000427191 MOSPD3O75425 235 aa12.51□□□□□ -0.41
PTPN13-203ENST00000427191 MPZL1O95297 269 aa12.51□□□□□ -0.41
PTPN13-203ENST00000427191 PTGDSP41222 190 aa12.51□□□□□ -0.41
PTPN13-203ENST00000427191 SUMO2P61956 95 aaKnown RBP12.51□□□□□ -0.41
PTPN13-203ENST00000427191 DEFB124Q8NES8 71 aa12.51□□□□□ -0.41
PTPN13-203ENST00000427191 ST6GALNAC2Q9UJ37 374 aa12.51□□□□□ -0.41
PTPN13-203ENST00000427191 ARL14EPLP0DKL9 152 aa12.51□□□□□ -0.41
PTPN13-203ENST00000427191 ASIPP42127 132 aa12.51□□□□□ -0.41
PTPN13-203ENST00000427191 SMIM8Q96KF7 97 aa12.51□□□□□ -0.41
PTPN13-203ENST00000427191 GPX4P36969 197 aaPredicted RBP12.5□□□□□ -0.41
PTPN13-203ENST00000427191 DNM1P46Q6ZS02 220 aa12.5□□□□□ -0.41
PTPN13-203ENST00000427191 A0A1B0GTH9 108 aa12.5□□□□□ -0.41
PTPN13-203ENST00000427191 J3QW42 95 aa12.5□□□□□ -0.41
PTPN13-203ENST00000427191 CBLN3Q6UW01 205 aa12.5□□□□□ -0.41
PTPN13-203ENST00000427191 MYOFQ9NZM1 2061 aa12.5□□□□□ -0.41
PTPN13-203ENST00000427191 GPX1P07203 203 aa12.5□□□□□ -0.41
PTPN13-203ENST00000427191 VN1R4Q7Z5H5 301 aa12.5□□□□□ -0.41
PTPN13-203ENST00000427191 C1orf210Q8IVY1 113 aa12.5□□□□□ -0.41
PTPN13-203ENST00000427191 PGLYRP4Q96LB8 373 aa12.5□□□□□ -0.41
PTPN13-203ENST00000427191 SLC17A3O00476 420 aa12.5□□□□□ -0.41
PTPN13-203ENST00000427191 LINC01565O15544 149 aa12.5□□□□□ -0.41
PTPN13-203ENST00000427191 SRIP30626 198 aa12.5□□□□□ -0.41
PTPN13-203ENST00000427191 PCP4P48539 62 aa12.5□□□□□ -0.41
PTPN13-203ENST00000427191 DANCRP0C864 163 aa12.5□□□□□ -0.41
PTPN13-203ENST00000427191 EEF1AKMT3Q96AZ1 226 aa12.5□□□□□ -0.41
PTPN13-203ENST00000427191 CXCL16Q9H2A7 254 aa12.5□□□□□ -0.41
PTPN13-203ENST00000427191 PRF1P14222 555 aa12.5□□□□□ -0.41
PTPN13-203ENST00000427191 SRSF5Q13243 272 aaKnown RBP12.5□□□□□ -0.41
PTPN13-203ENST00000427191 ZNF56Q15929 161 aa12.5□□□□□ -0.41
PTPN13-203ENST00000427191 TRPM3Q9HCF6 1732 aaPredicted RBP12.5□□□□□ -0.41
PTPN13-203ENST00000427191 FAM216AQ8WUB2 273 aa12.5□□□□□ -0.41
PTPN13-203ENST00000427191 MS4A3Q96HJ5 214 aa12.5□□□□□ -0.41
PTPN13-203ENST00000427191 LINC01549A6NIU2 74 aa12.49□□□□□ -0.41
PTPN13-203ENST00000427191 TRAV8-7A0A075B6U6 113 aa12.49□□□□□ -0.41
PTPN13-203ENST00000427191 A0A1B0GV90 55 aa12.49□□□□□ -0.41
PTPN13-203ENST00000427191 NPIPB9F8W1W9 429 aa12.49□□□□□ -0.41
PTPN13-203ENST00000427191 PLA2G10O15496 165 aa12.49□□□□□ -0.41
PTPN13-203ENST00000427191 NPIPB7O75200 414 aa12.49□□□□□ -0.41
PTPN13-203ENST00000427191 IGHV3-13P01766 116 aa12.49□□□□□ -0.41
PTPN13-203ENST00000427191 IGHV3-7P01780 117 aa12.49□□□□□ -0.41
PTPN13-203ENST00000427191 ATP5G2Q06055 141 aa12.49□□□□□ -0.41
PTPN13-203ENST00000427191 LINC01559Q495D7 138 aa12.49□□□□□ -0.41
PTPN13-203ENST00000427191 FAM159AQ6UWV7 190 aa12.49□□□□□ -0.41
PTPN13-203ENST00000427191 PARLQ9H300 379 aa12.49□□□□□ -0.41
PTPN13-203ENST00000427191 C7orf71A4D174 169 aa12.49□□□□□ -0.41
PTPN13-203ENST00000427191 DPRXA6NFQ7 191 aa12.49□□□□□ -0.41
PTPN13-203ENST00000427191 NMBP08949 121 aa12.49□□□□□ -0.41
PTPN13-203ENST00000427191 PSG6Q00889 435 aa12.49□□□□□ -0.41
PTPN13-203ENST00000427191 PGPEP1Q9NXJ5 209 aa12.49□□□□□ -0.41
PTPN13-203ENST00000427191 GPR6P46095 362 aaPredicted RBP12.49□□□□□ -0.41
PTPN13-203ENST00000427191 SOSTQ9BQB4 213 aa12.49□□□□□ -0.41
PTPN13-203ENST00000427191 AKIRIN1Q9H9L7 192 aaPredicted RBP12.49□□□□□ -0.41
PTPN13-203ENST00000427191 IGHV4-34P06331 123 aa12.49□□□□□ -0.41
PTPN13-203ENST00000427191 MAGEA5P43359 124 aa12.49□□□□□ -0.41
PTPN13-203ENST00000427191 TNFRSF9Q07011 255 aa12.49□□□□□ -0.41
PTPN13-203ENST00000427191 NIT1Q86X76 327 aa12.49□□□□□ -0.41
PTPN13-203ENST00000427191 TMEM252Q8N6L7 170 aa12.49□□□□□ -0.41
PTPN13-203ENST00000427191 IGKV3-7A0A075B6H7 116 aa12.49□□□□□ -0.41
PTPN13-203ENST00000427191 TRAV39A0A0B4J263 110 aa12.49□□□□□ -0.41
PTPN13-203ENST00000427191 ITGBL1O95965 494 aaPredicted RBP12.49□□□□□ -0.41
PTPN13-203ENST00000427191 HKR1P10072 659 aa12.49□□□□□ -0.41
PTPN13-203ENST00000427191 PCSK4Q6UW60 755 aa12.49□□□□□ -0.41
PTPN13-203ENST00000427191 PIMREGQ9BSJ6 248 aa12.49□□□□□ -0.41
PTPN13-203ENST00000427191 FLRT3Q9NZU0 649 aa12.49□□□□□ -0.41
PTPN13-203ENST00000427191 ZNF250P15622 560 aa12.48□□□□□ -0.41
PTPN13-203ENST00000427191 RCC1P18754 421 aaPredicted RBP12.48□□□□□ -0.41
PTPN13-203ENST00000427191 MPV17P39210 176 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms