RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 GNG10P50151 68 aa21.79■■□□□ 1.08
LDB1-202ENST00000425280 EIF5AP63241 154 aaKnown RBP21.79■■□□□ 1.08
LDB1-202ENST00000425280 ODF3L1Q8IXM7 274 aa21.79■■□□□ 1.08
LDB1-202ENST00000425280 ZNF436-AS1Q8NC38 126 aaPredicted RBP21.79■■□□□ 1.08
LDB1-202ENST00000425280 COA4Q9NYJ1 87 aa21.79■■□□□ 1.08
LDB1-202ENST00000425280 SAA2-SAA4A0A096LPE2 208 aa21.79■■□□□ 1.08
LDB1-202ENST00000425280 FSTL3O95633 263 aa21.79■■□□□ 1.08
LDB1-202ENST00000425280 IGHV2-70P01814 119 aa21.79■■□□□ 1.08
LDB1-202ENST00000425280 DANCRP0C864 163 aa21.79■■□□□ 1.08
LDB1-202ENST00000425280 SAA2P0DJI9 122 aaPredicted RBP21.79■■□□□ 1.08
LDB1-202ENST00000425280 ZNF295-AS1Q8N0V1 137 aa21.79■■□□□ 1.08
LDB1-202ENST00000425280 TMED6Q8WW62 240 aa21.79■■□□□ 1.08
LDB1-202ENST00000425280 RAB29O14966 203 aa21.78■■□□□ 1.08
LDB1-202ENST00000425280 JTBO76095 146 aa21.78■■□□□ 1.08
LDB1-202ENST00000425280 HEPN1Q6WQI6 88 aa21.78■■□□□ 1.08
LDB1-202ENST00000425280 TMEM252Q8N6L7 170 aa21.78■■□□□ 1.08
LDB1-202ENST00000425280 LAMP3Q9UQV4 416 aa21.78■■□□□ 1.08
LDB1-202ENST00000425280 IGSF10Q6WRI0 2623 aa21.78■■□□□ 1.08
LDB1-202ENST00000425280 FCGR3BO75015 233 aa21.78■■□□□ 1.08
LDB1-202ENST00000425280 SLC25A48Q6ZT89 311 aaKnown RBP21.78■■□□□ 1.08
LDB1-202ENST00000425280 LYG1Q8N1E2 194 aa21.78■■□□□ 1.08
LDB1-202ENST00000425280 ZNF251Q9BRH9 671 aa21.78■■□□□ 1.08
LDB1-202ENST00000425280 DTX2Q86UW9 622 aa21.77■■□□□ 1.08
LDB1-202ENST00000425280 RAB40CQ96S21 281 aa21.77■■□□□ 1.08
LDB1-202ENST00000425280 SLC25A31Q9H0C2 315 aa21.77■■□□□ 1.08
LDB1-202ENST00000425280 MED9Q9NWA0 146 aa21.77■■□□□ 1.08
LDB1-202ENST00000425280 TOR1AO14656 332 aa21.76■■□□□ 1.07
LDB1-202ENST00000425280 SYNGR2O43760 224 aa21.76■■□□□ 1.07
LDB1-202ENST00000425280 LY6HO94772 140 aa21.76■■□□□ 1.07
LDB1-202ENST00000425280 DAOP14920 347 aa21.76■■□□□ 1.07
LDB1-202ENST00000425280 MRPS11P82912 194 aaKnown RBP21.76■■□□□ 1.07
LDB1-202ENST00000425280 MIDNQ504T8 468 aa21.76■■□□□ 1.07
LDB1-202ENST00000425280 UBAC2Q8NBM4 344 aa21.76■■□□□ 1.07
LDB1-202ENST00000425280 DDB2Q92466 427 aa21.76■■□□□ 1.07
LDB1-202ENST00000425280 HRNRQ86YZ3 2850 aaPredicted RBP21.76■■□□□ 1.07
LDB1-202ENST00000425280 AVPI1Q5T686 147 aa21.75■■□□□ 1.07
LDB1-202ENST00000425280 PRELID3BQ9Y3B1 194 aa21.75■■□□□ 1.07
LDB1-202ENST00000425280 MARCH11A6NNE9 402 aa21.75■■□□□ 1.07
LDB1-202ENST00000425280 RBFOX2O43251 390 aaKnown RBP eCLIP21.75■■□□□ 1.072e-7■■■□□ 16
LDB1-202ENST00000425280 HPRT1P00492 218 aa21.75■■□□□ 1.07
LDB1-202ENST00000425280 DLX6P56179 175 aa21.75■■□□□ 1.07
LDB1-202ENST00000425280 H2BFWTQ7Z2G1 175 aa21.75■■□□□ 1.07
LDB1-202ENST00000425280 R3HDM4Q96D70 268 aa21.75■■□□□ 1.07
LDB1-202ENST00000425280 S1PR3Q99500 378 aa21.75■■□□□ 1.07
LDB1-202ENST00000425280 ARV1Q9H2C2 271 aa21.75■■□□□ 1.07
LDB1-202ENST00000425280 FAM90A26D6RGX4 464 aa21.74■■□□□ 1.07
LDB1-202ENST00000425280 IGFBP2P18065 325 aa21.74■■□□□ 1.07
LDB1-202ENST00000425280 TMEM155Q4W5P6 130 aa21.74■■□□□ 1.07
LDB1-202ENST00000425280 REG4Q9BYZ8 158 aa21.74■■□□□ 1.07
LDB1-202ENST00000425280 ZNRD1Q9P1U0 126 aa21.74■■□□□ 1.07
LDB1-202ENST00000425280 CFAP46Q8IYW2 2715 aa21.73■■□□□ 1.07
LDB1-202ENST00000425280 LRBAP50851 2863 aa21.73■■□□□ 1.07
LDB1-202ENST00000425280 BORCS7-ASMTA0A0B4J1R7 106 aa21.73■■□□□ 1.07
LDB1-202ENST00000425280 FGF16O43320 207 aa21.73■■□□□ 1.07
LDB1-202ENST00000425280 KIR2DS2P43631 304 aa21.73■■□□□ 1.07
LDB1-202ENST00000425280 RPL23AP62750 156 aaKnown RBP21.73■■□□□ 1.07
LDB1-202ENST00000425280 ZNF841Q6ZN19 808 aa21.73■■□□□ 1.07
LDB1-202ENST00000425280 NEU4Q8WWR8 484 aaPredicted RBP21.73■■□□□ 1.07
LDB1-202ENST00000425280 BARX1Q9HBU1 254 aaPredicted RBP21.73■■□□□ 1.07
LDB1-202ENST00000425280 CTNNBIP1Q9NSA3 81 aaPredicted RBP21.73■■□□□ 1.07
LDB1-202ENST00000425280 WSB1Q9Y6I7 421 aa21.73■■□□□ 1.07
LDB1-202ENST00000425280 USP24Q9UPU5 2620 aa21.73■■□□□ 1.07
LDB1-202ENST00000425280 IAPPP10997 89 aa21.73■■□□□ 1.07
LDB1-202ENST00000425280 HSPB7Q9UBY9 170 aa21.73■■□□□ 1.07
LDB1-202ENST00000425280 PFDN2Q9UHV9 154 aa21.73■■□□□ 1.07
LDB1-202ENST00000425280 CST7O76096 145 aa21.72■■□□□ 1.07
LDB1-202ENST00000425280 FAM157CP0CG43 387 aa21.72■■□□□ 1.07
LDB1-202ENST00000425280 THBS3P49746 956 aa21.72■■□□□ 1.07
LDB1-202ENST00000425280 TNFRSF9Q07011 255 aa21.72■■□□□ 1.07
LDB1-202ENST00000425280 RALYQ9UKM9 306 aaKnown RBP21.72■■□□□ 1.07
LDB1-202ENST00000425280 TRBV23-1A0A0A0MS06 115 aa21.71■■□□□ 1.07
LDB1-202ENST00000425280 H3BP45 60 aa21.71■■□□□ 1.07
LDB1-202ENST00000425280 TEX46H3BTG2 121 aa21.71■■□□□ 1.07
LDB1-202ENST00000425280 TXNL1O43396 289 aa21.71■■□□□ 1.07
LDB1-202ENST00000425280 BAXQ07812 192 aa21.71■■□□□ 1.07
LDB1-202ENST00000425280 AANATQ16613 207 aa21.71■■□□□ 1.07
LDB1-202ENST00000425280 EIF5AL1Q6IS14 154 aaKnown RBP21.71■■□□□ 1.07
LDB1-202ENST00000425280 ZNF383Q8NA42 475 aa21.71■■□□□ 1.07
LDB1-202ENST00000425280 RNF141Q8WVD5 230 aa21.71■■□□□ 1.07
LDB1-202ENST00000425280 MFSD2BA6NFX1 497 aa21.71■■□□□ 1.07
LDB1-202ENST00000425280 UBE2KP61086 200 aa21.71■■□□□ 1.07
LDB1-202ENST00000425280 LRRC20Q8TCA0 184 aa21.71■■□□□ 1.07
LDB1-202ENST00000425280 SMIM8Q96KF7 97 aa21.71■■□□□ 1.07
LDB1-202ENST00000425280 RBKSQ9H477 322 aa21.71■■□□□ 1.07
LDB1-202ENST00000425280 CACNA1BQ00975 2339 aa21.71■■□□□ 1.07
LDB1-202ENST00000425280 FBXO24O75426 580 aa21.7■■□□□ 1.06
LDB1-202ENST00000425280 CLINT1Q14677 625 aa21.7■■□□□ 1.06
LDB1-202ENST00000425280 ADTRPQ96IZ2 230 aa21.7■■□□□ 1.06
LDB1-202ENST00000425280 PSENENQ9NZ42 101 aa21.7■■□□□ 1.06
LDB1-202ENST00000425280 DYNLT3P51808 116 aa21.7■■□□□ 1.06
LDB1-202ENST00000425280 OR5C1Q8NGR4 320 aa21.7■■□□□ 1.06
LDB1-202ENST00000425280 OR4S2Q8NH73 311 aa21.7■■□□□ 1.06
LDB1-202ENST00000425280 GINS3Q9BRX5 216 aa21.7■■□□□ 1.06
LDB1-202ENST00000425280 UBTD1Q9HAC8 227 aa21.7■■□□□ 1.06
LDB1-202ENST00000425280 PLA2G2EQ9NZK7 142 aa21.7■■□□□ 1.06
LDB1-202ENST00000425280 TAS2R30P59541 319 aa21.69■■□□□ 1.06
LDB1-202ENST00000425280 TMEM217Q8N7C4 229 aa21.69■■□□□ 1.06
LDB1-202ENST00000425280 RAB39BQ96DA2 213 aa21.69■■□□□ 1.06
LDB1-202ENST00000425280 OR9G9P0C7N8 305 aa21.68■■□□□ 1.06
LDB1-202ENST00000425280 TMEM267Q0VDI3 215 aaPredicted RBP21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms