RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 FABP6P51161 128 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 ELLP55199 621 aaPredicted RBP8.95□□□□□ -0.98
CUX1-205ENST00000425244 ZNF816Q0VGE8 651 aaPredicted RBP8.95□□□□□ -0.98
CUX1-205ENST00000425244 ZNF146Q15072 292 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 OR8G2PQ6IF36 304 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 ZNF429Q86V71 674 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 ZNF561Q8N587 486 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 TPRX1Q8N7U7 411 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 LSM10Q969L4 123 aaKnown RBP8.95□□□□□ -0.98
CUX1-205ENST00000425244 OR2D2Q9H210 308 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 UNKLQ9H9P5 680 aaKnown RBP8.95□□□□□ -0.98
CUX1-205ENST00000425244 METTL1Q9UBP6 276 aaKnown RBP8.95□□□□□ -0.98
CUX1-205ENST00000425244 MMP24Q9Y5R2 645 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 LRBAP50851 2863 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 TMEM30CPA0ZSE6 113 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 MBD3L4A6NDZ8 208 aaPredicted RBP8.95□□□□□ -0.98
CUX1-205ENST00000425244 MBD3L3A6NE82 208 aaPredicted RBP8.95□□□□□ -0.98
CUX1-205ENST00000425244 MBD3L5A6NJ08 208 aaPredicted RBP8.95□□□□□ -0.98
CUX1-205ENST00000425244 TIMM8AO60220 97 aaPredicted RBP8.95□□□□□ -0.98
CUX1-205ENST00000425244 RAMP3O60896 148 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 CLDN1O95832 211 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 SLC25A6P12236 298 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 RAB4AP20338 218 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 GABRA2P47869 451 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 GABRA6Q16445 453 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 CLDND2Q8NHS1 167 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 MBD3L2Q8NHZ7 208 aaPredicted RBP8.95□□□□□ -0.98
CUX1-205ENST00000425244 MRGPRDQ8TDS7 321 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 MSL2Q9HCI7 577 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 RPRMQ9NS64 109 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 URGCP-MRPS24S4R325 110 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 IGSF10Q6WRI0 2623 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 HEATR1Q9H583 2144 aaKnown RBP8.95□□□□□ -0.98
CUX1-205ENST00000425244 PIGBOS1A0A0B4J2F0 54 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 IQCF6A8MYZ5 107 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 C12orf77C9JDV5 145 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 HBE1P02100 147 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 RPS16P62249 146 aaKnown RBP8.95□□□□□ -0.98
CUX1-205ENST00000425244 FABP9Q0Z7S8 132 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 GUSBP1Q15486 140 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 LBHQ53QV2 105 aaPredicted RBP8.95□□□□□ -0.98
CUX1-205ENST00000425244 BTNL3Q6UXE8 466 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 FGFRL1Q8N441 504 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 OR8G5Q8NG78 346 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 GALMQ96C23 342 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 GGACTQ9BVM4 153 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 TUBA4BQ9H853 241 aa8.95□□□□□ -0.98
CUX1-205ENST00000425244 CADP27708 2225 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 TRGV8A0A0C4DH27 118 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 UBE2L5PA0A1B0GUS4 154 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 MLNRO43193 412 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 AGAP20933 346 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 G6PCP35575 357 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 RAB11AP62491 216 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 HBG1P69891 147 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 HBG2P69892 147 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 LTC4SQ16873 150 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 ZNF506Q5JVG8 444 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 HAPLN4Q86UW8 402 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 TGIF2LXQ8IUE1 241 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 ZNF525Q8N782 197 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 RFESDQ8TAC1 157 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 NINJ1Q92982 152 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 RBMXL1Q96E39 390 aaKnown RBP8.94□□□□□ -0.98
CUX1-205ENST00000425244 NIPSNAP3BQ9BS92 247 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 SMDT1Q9H4I9 107 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 ZNF665Q9H7R5 613 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 MBNL3Q9NUK0 354 aaKnown RBP8.94□□□□□ -0.98
CUX1-205ENST00000425244 CFAP46Q8IYW2 2715 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 DOCK11Q5JSL3 2073 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 POLEQ07864 2286 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 IGHV3-43A0A0B4J1X8 118 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.94□□□□□ -0.98
CUX1-205ENST00000425244 MARCH11A6NNE9 402 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 J3QW42 95 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 HBZP02008 142 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 IGHV3-43DP0DP04 118 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 NQO2P16083 231 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 RPS10P46783 165 aaKnown RBP8.94□□□□□ -0.98
CUX1-205ENST00000425244 DLK1P80370 383 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 TLE1Q04724 770 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 KLRB1Q12918 225 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 ZNF787Q6DD87 383 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 PLSCR4Q9NRQ2 329 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 WIPI2Q9Y4P8 454 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 ICE1Q9Y2F5 2266 aa8.94□□□□□ -0.98
CUX1-205ENST00000425244 USP24Q9UPU5 2620 aa8.93□□□□□ -0.98
CUX1-205ENST00000425244 RNF212BA8MTL3 300 aa8.93□□□□□ -0.98
CUX1-205ENST00000425244 DEFB108AA8MXU0 73 aa8.93□□□□□ -0.98
CUX1-205ENST00000425244 RBMXL2O75526 392 aaKnown RBP8.93□□□□□ -0.98
CUX1-205ENST00000425244 HSPB1P04792 205 aaKnown RBP8.93□□□□□ -0.98
CUX1-205ENST00000425244 ZNF343Q6P1L6 599 aa8.93□□□□□ -0.98
CUX1-205ENST00000425244 DTD1Q8TEA8 209 aa8.93□□□□□ -0.98
CUX1-205ENST00000425244 TCTEX1D2Q8WW35 142 aa8.93□□□□□ -0.98
CUX1-205ENST00000425244 OR4C12Q96R67 309 aa8.93□□□□□ -0.98
CUX1-205ENST00000425244 MRPL37Q9BZE1 423 aaKnown RBP8.93□□□□□ -0.98
CUX1-205ENST00000425244 EPG5Q9HCE0 2579 aa8.93□□□□□ -0.98
CUX1-205ENST00000425244 TMEM210A6NLX4 147 aa8.93□□□□□ -0.98
CUX1-205ENST00000425244 SSTR5P35346 364 aa8.93□□□□□ -0.98
CUX1-205ENST00000425244 GNG10P50151 68 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms