RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 C11orf91Q3C1V1 193 aa10.85□□□□□ -0.67
PRPF39-202ENST00000424478 TGIF2LXQ8IUE1 241 aa10.85□□□□□ -0.67
PRPF39-202ENST00000424478 BVESQ8NE79 360 aa10.85□□□□□ -0.67
PRPF39-202ENST00000424478 LHFPL5Q8TAF8 219 aa10.85□□□□□ -0.67
PRPF39-202ENST00000424478 ZNF596Q8TC21 504 aa10.85□□□□□ -0.67
PRPF39-202ENST00000424478 ALG5Q9Y673 324 aa10.85□□□□□ -0.67
PRPF39-202ENST00000424478 A0A0A6YYJ9 748 aa10.85□□□□□ -0.67
PRPF39-202ENST00000424478 TIMM23O14925 209 aa10.85□□□□□ -0.67
PRPF39-202ENST00000424478 ANKRD55Q3KP44 614 aa10.85□□□□□ -0.67
PRPF39-202ENST00000424478 CMTM1Q8IZ96 169 aa10.85□□□□□ -0.67
PRPF39-202ENST00000424478 ZDHHC22Q8N966 263 aa10.85□□□□□ -0.67
PRPF39-202ENST00000424478 ZFAND1Q8TCF1 268 aa10.85□□□□□ -0.67
PRPF39-202ENST00000424478 DEDD2Q8WXF8 326 aa10.85□□□□□ -0.67
PRPF39-202ENST00000424478 PIPOXQ9P0Z9 390 aa10.85□□□□□ -0.67
PRPF39-202ENST00000424478 DPM3Q9P2X0 92 aa10.85□□□□□ -0.67
PRPF39-202ENST00000424478 H7C2Y5 167 aa10.84□□□□□ -0.67
PRPF39-202ENST00000424478 UCP3P55916 312 aa10.84□□□□□ -0.67
PRPF39-202ENST00000424478 EIF4EBP1Q13541 118 aaPredicted RBP10.84□□□□□ -0.67
PRPF39-202ENST00000424478 TPTE2P1Q5T6R2 138 aa10.84□□□□□ -0.67
PRPF39-202ENST00000424478 SPNS3Q6ZMD2 512 aa10.84□□□□□ -0.67
PRPF39-202ENST00000424478 ZNF833PQ6ZTB9 187 aa10.84□□□□□ -0.67
PRPF39-202ENST00000424478 SSX9Q7RTT3 188 aa10.84□□□□□ -0.67
PRPF39-202ENST00000424478 SLC25A42Q86VD7 318 aa10.84□□□□□ -0.67
PRPF39-202ENST00000424478 BEND2Q8NDZ0 799 aa10.84□□□□□ -0.67
PRPF39-202ENST00000424478 S1PR3Q99500 378 aa10.84□□□□□ -0.67
PRPF39-202ENST00000424478 LY6LH3BQJ8 138 aa10.84□□□□□ -0.67
PRPF39-202ENST00000424478 CCSO14618 274 aa10.84□□□□□ -0.67
PRPF39-202ENST00000424478 CNTFRP26992 372 aa10.84□□□□□ -0.67
PRPF39-202ENST00000424478 C2orf68Q2NKX9 166 aa10.84□□□□□ -0.67
PRPF39-202ENST00000424478 IGHV1-3A0A0C4DH29 117 aa10.83□□□□□ -0.68
PRPF39-202ENST00000424478 C3orf85A0A1B0GTC6 90 aa10.83□□□□□ -0.68
PRPF39-202ENST00000424478 A0A1W2PPI3 338 aa10.83□□□□□ -0.68
PRPF39-202ENST00000424478 CRYM-AS1A6NIL9 109 aa10.83□□□□□ -0.68
PRPF39-202ENST00000424478 CD5LO43866 347 aa10.83□□□□□ -0.68
PRPF39-202ENST00000424478 SPAG16Q8N0X2 631 aa10.83□□□□□ -0.68
PRPF39-202ENST00000424478 LINC00311Q8N616 119 aa10.83□□□□□ -0.68
PRPF39-202ENST00000424478 NABP2Q9BQ15 211 aa10.83□□□□□ -0.68
PRPF39-202ENST00000424478 NAA60Q9H7X0 242 aa10.83□□□□□ -0.68
PRPF39-202ENST00000424478 C9orf170A2RU37 121 aa10.83□□□□□ -0.68
PRPF39-202ENST00000424478 CRYZL1O95825 349 aa10.83□□□□□ -0.68
PRPF39-202ENST00000424478 CLEC9AQ6UXN8 241 aa10.83□□□□□ -0.68
PRPF39-202ENST00000424478 TAF15Q92804 592 aaKnown RBP eCLIP10.83□□□□□ -0.68
PRPF39-202ENST00000424478 WDR89Q96FK6 387 aaPredicted RBP10.83□□□□□ -0.68
PRPF39-202ENST00000424478 TMUB1Q9BVT8 246 aa10.83□□□□□ -0.68
PRPF39-202ENST00000424478 MPTX1A8MV57 137 aa10.83□□□□□ -0.68
PRPF39-202ENST00000424478 LEUTXA8MZ59 168 aa10.83□□□□□ -0.68
PRPF39-202ENST00000424478 ADAP1O75689 374 aa10.83□□□□□ -0.68
PRPF39-202ENST00000424478 GATA3P23771 443 aa10.83□□□□□ -0.68
PRPF39-202ENST00000424478 F2RP25116 425 aa10.83□□□□□ -0.68
PRPF39-202ENST00000424478 ZNF585BQ52M93 769 aa10.83□□□□□ -0.68
PRPF39-202ENST00000424478 TMEM128Q5BJH2 165 aa10.83□□□□□ -0.68
PRPF39-202ENST00000424478 GLYATL2Q8WU03 294 aa10.83□□□□□ -0.68
PRPF39-202ENST00000424478 S1PR2O95136 353 aa10.82□□□□□ -0.68
PRPF39-202ENST00000424478 NXPH3O95157 252 aa10.82□□□□□ -0.68
PRPF39-202ENST00000424478 SURF2Q15527 256 aaPredicted RBP10.82□□□□□ -0.68
PRPF39-202ENST00000424478 DEFB112Q30KQ8 113 aa10.82□□□□□ -0.68
PRPF39-202ENST00000424478 TMEM30BQ3MIR4 351 aa10.82□□□□□ -0.68
PRPF39-202ENST00000424478 SGPP2Q8IWX5 399 aa10.82□□□□□ -0.68
PRPF39-202ENST00000424478 MS4A7Q9GZW8 240 aaPredicted RBP10.82□□□□□ -0.68
PRPF39-202ENST00000424478 INAFM1C9JVW0 142 aa10.82□□□□□ -0.68
PRPF39-202ENST00000424478 SIX6O95475 246 aa10.82□□□□□ -0.68
PRPF39-202ENST00000424478 IGKV1-39P01597 117 aa10.82□□□□□ -0.68
PRPF39-202ENST00000424478 IGKV1D-39P04432 117 aa10.82□□□□□ -0.68
PRPF39-202ENST00000424478 HES1Q14469 280 aa10.82□□□□□ -0.68
PRPF39-202ENST00000424478 LY6EQ16553 131 aa10.82□□□□□ -0.68
PRPF39-202ENST00000424478 LPCAT3Q6P1A2 487 aa10.82□□□□□ -0.68
PRPF39-202ENST00000424478 TMEM219Q86XT9 240 aa10.82□□□□□ -0.68
PRPF39-202ENST00000424478 HOXB5P09067 269 aa10.81□□□□□ -0.68
PRPF39-202ENST00000424478 NANPQ8TBE9 248 aa10.81□□□□□ -0.68
PRPF39-202ENST00000424478 FAM96BQ9Y3D0 163 aa10.81□□□□□ -0.68
PRPF39-202ENST00000424478 SH2D7A6NKC9 451 aaPredicted RBP10.81□□□□□ -0.68
PRPF39-202ENST00000424478 H0YJW9 148 aa10.81□□□□□ -0.68
PRPF39-202ENST00000424478 KRASP01116 189 aa10.81□□□□□ -0.68
PRPF39-202ENST00000424478 LPAR6P43657 344 aa10.81□□□□□ -0.68
PRPF39-202ENST00000424478 LYZL2Q7Z4W2 148 aa10.81□□□□□ -0.68
PRPF39-202ENST00000424478 ZNF48Q96MX3 618 aaPredicted RBP10.81□□□□□ -0.68
PRPF39-202ENST00000424478 SLC35D1Q9NTN3 355 aa10.81□□□□□ -0.68
PRPF39-202ENST00000424478 SRRM4A7MD48 611 aaKnown RBP10.81□□□□□ -0.68
PRPF39-202ENST00000424478 J3QLI3 93 aa10.81□□□□□ -0.68
PRPF39-202ENST00000424478 ITGB1BP1O14713 200 aa10.81□□□□□ -0.68
PRPF39-202ENST00000424478 DHFRP00374 187 aa10.81□□□□□ -0.68
PRPF39-202ENST00000424478 IGKV1D-33P01593 117 aa10.81□□□□□ -0.68
PRPF39-202ENST00000424478 IGKV1-33P01594 117 aa10.81□□□□□ -0.68
PRPF39-202ENST00000424478 GAPDHP04406 335 aaKnown RBP10.81□□□□□ -0.68
PRPF39-202ENST00000424478 G6PCP35575 357 aa10.81□□□□□ -0.68
PRPF39-202ENST00000424478 SRP14P37108 136 aaKnown RBP10.81□□□□□ -0.68
PRPF39-202ENST00000424478 SRSF2Q01130 221 aaKnown RBP10.81□□□□□ -0.68
PRPF39-202ENST00000424478 Q6ZNX1 250 aa10.81□□□□□ -0.68
PRPF39-202ENST00000424478 LYG2Q86SG7 212 aa10.81□□□□□ -0.68
PRPF39-202ENST00000424478 CCDC71LQ8N9Z2 235 aa10.81□□□□□ -0.68
PRPF39-202ENST00000424478 DDB2Q92466 427 aa10.81□□□□□ -0.68
PRPF39-202ENST00000424478 AKR1E2Q96JD6 320 aa10.81□□□□□ -0.68
PRPF39-202ENST00000424478 DMRTB1Q96MA1 342 aa10.81□□□□□ -0.68
PRPF39-202ENST00000424478 SCGB3A2Q96PL1 93 aa10.81□□□□□ -0.68
PRPF39-202ENST00000424478 NSG2Q9Y328 171 aa10.81□□□□□ -0.68
PRPF39-202ENST00000424478 AMMECR1Q9Y4X0 333 aaPredicted RBP10.81□□□□□ -0.68
PRPF39-202ENST00000424478 A0A0G2JRQ6 117 aa10.8□□□□□ -0.68
PRPF39-202ENST00000424478 SFT2D2O95562 160 aa10.8□□□□□ -0.68
PRPF39-202ENST00000424478 IFNA2P01563 188 aa10.8□□□□□ -0.68
PRPF39-202ENST00000424478 IL3RAP26951 378 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms