RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 IFNA6P05013 189 aa6.14□□□□□ -1.43
VIM-202ENST00000421459 CRYGBP07316 175 aa6.14□□□□□ -1.43
VIM-202ENST00000421459 GNAO1P09471 354 aa6.14□□□□□ -1.43
VIM-202ENST00000421459 CD7P09564 240 aa6.14□□□□□ -1.43
VIM-202ENST00000421459 RBMY1DP0C7P1 496 aaKnown RBP6.14□□□□□ -1.43
VIM-202ENST00000421459 TMEM50BP56557 158 aa6.14□□□□□ -1.43
VIM-202ENST00000421459 HLA-DRB3P79483 266 aa6.14□□□□□ -1.43
VIM-202ENST00000421459 PLA2G7Q13093 441 aa6.14□□□□□ -1.43
VIM-202ENST00000421459 P2RY14Q15391 338 aa6.14□□□□□ -1.43
VIM-202ENST00000421459 RBM48Q5RL73 367 aaKnown RBP6.14□□□□□ -1.43
VIM-202ENST00000421459 C1orf100Q5SVJ3 147 aa6.14□□□□□ -1.43
VIM-202ENST00000421459 AHSA2Q719I0 299 aa6.14□□□□□ -1.43
VIM-202ENST00000421459 DEFB125Q8N687 156 aa6.14□□□□□ -1.43
VIM-202ENST00000421459 NKAIN3Q8N8D7 197 aa6.14□□□□□ -1.43
VIM-202ENST00000421459 C5orf30Q96GV9 206 aa6.14□□□□□ -1.43
VIM-202ENST00000421459 TSNAXQ99598 290 aaKnown RBP6.14□□□□□ -1.43
VIM-202ENST00000421459 GFI1Q99684 422 aa6.14□□□□□ -1.43
VIM-202ENST00000421459 RNF5Q99942 180 aa6.14□□□□□ -1.43
VIM-202ENST00000421459 TM2D1Q9BX74 207 aa6.14□□□□□ -1.43
VIM-202ENST00000421459 TMEM59Q9BXS4 323 aa6.14□□□□□ -1.43
VIM-202ENST00000421459 LPAR5Q9H1C0 372 aa6.14□□□□□ -1.43
VIM-202ENST00000421459 Q9H521 79 aa6.14□□□□□ -1.43
VIM-202ENST00000421459 PLEKHJ1Q9NW61 149 aa6.14□□□□□ -1.43
VIM-202ENST00000421459 GHRLQ9UBU3 117 aa6.14□□□□□ -1.43
VIM-202ENST00000421459 PEF1Q9UBV8 284 aaKnown RBP6.14□□□□□ -1.43
VIM-202ENST00000421459 VPS13DQ5THJ4 4388 aa6.13□□□□□ -1.43
VIM-202ENST00000421459 IRGMA1A4Y4 181 aa6.13□□□□□ -1.43
VIM-202ENST00000421459 EFCAB10A6NFE3 127 aa6.13□□□□□ -1.43
VIM-202ENST00000421459 MSGN1A6NI15 193 aa6.13□□□□□ -1.43
VIM-202ENST00000421459 ZNF785A8K8V0 405 aa6.13□□□□□ -1.43
VIM-202ENST00000421459 H0Y980 276 aa6.13□□□□□ -1.43
VIM-202ENST00000421459 ZP3P21754 424 aa6.13□□□□□ -1.43
VIM-202ENST00000421459 ZBTB25P24278 435 aa6.13□□□□□ -1.43
VIM-202ENST00000421459 MECP2P51608 486 aaKnown RBP6.13□□□□□ -1.43
VIM-202ENST00000421459 CLDN12P56749 244 aa6.13□□□□□ -1.43
VIM-202ENST00000421459 TAS2R43P59537 309 aa6.13□□□□□ -1.43
VIM-202ENST00000421459 CD81P60033 236 aa6.13□□□□□ -1.43
VIM-202ENST00000421459 TAGLNQ01995 201 aaKnown RBP6.13□□□□□ -1.43
VIM-202ENST00000421459 CD300EQ496F6 205 aaPredicted RBP6.13□□□□□ -1.43
VIM-202ENST00000421459 GLT8D1Q68CQ7 371 aa6.13□□□□□ -1.43
VIM-202ENST00000421459 ZNF343Q6P1L6 599 aa6.13□□□□□ -1.43
VIM-202ENST00000421459 LINC00322Q6ZN03 302 aaPredicted RBP6.13□□□□□ -1.43
VIM-202ENST00000421459 C19orf35Q6ZS72 473 aa6.13□□□□□ -1.43
VIM-202ENST00000421459 CEACAM19Q7Z692 300 aa6.13□□□□□ -1.43
VIM-202ENST00000421459 DHRSXQ8N5I4 330 aa6.13□□□□□ -1.43
VIM-202ENST00000421459 NANOGP1Q8N7R0 232 aa6.13□□□□□ -1.43
VIM-202ENST00000421459 BVESQ8NE79 360 aa6.13□□□□□ -1.43
VIM-202ENST00000421459 BPIFB6Q8NFQ5 453 aa6.13□□□□□ -1.43
VIM-202ENST00000421459 KCNG3Q8TAE7 436 aa6.13□□□□□ -1.43
VIM-202ENST00000421459 ARHGAP5-AS1Q96IT6 56 aa6.13□□□□□ -1.43
VIM-202ENST00000421459 PECRQ9BY49 303 aa6.13□□□□□ -1.43
VIM-202ENST00000421459 TINAGL1Q9GZM7 467 aaPredicted RBP6.13□□□□□ -1.43
VIM-202ENST00000421459 Q9N2K0 584 aa6.13□□□□□ -1.43
VIM-202ENST00000421459 SLC35D1Q9NTN3 355 aa6.13□□□□□ -1.43
VIM-202ENST00000421459 COA4Q9NYJ1 87 aa6.13□□□□□ -1.43
VIM-202ENST00000421459 PSORS1C1Q9UIG5 152 aa6.13□□□□□ -1.43
VIM-202ENST00000421459 ZNF221Q9UK13 617 aa6.13□□□□□ -1.43
VIM-202ENST00000421459 CEPT1Q9Y6K0 416 aa6.13□□□□□ -1.43
VIM-202ENST00000421459 PCLOQ9Y6V0 5065 aa6.13□□□□□ -1.43
VIM-202ENST00000421459 SORL1Q92673 2214 aa6.13□□□□□ -1.43
VIM-202ENST00000421459 TRBV6-6A0A0A6YYG2 114 aa6.12□□□□□ -1.43
VIM-202ENST00000421459 A0A0G2JLM5 398 aa6.12□□□□□ -1.43
VIM-202ENST00000421459 FOXI3A8MTJ6 420 aaPredicted RBP6.12□□□□□ -1.43
VIM-202ENST00000421459 BMPR1BO00238 502 aa6.12□□□□□ -1.43
VIM-202ENST00000421459 ITGB1BP1O14713 200 aa6.12□□□□□ -1.43
VIM-202ENST00000421459 MYL12BO14950 172 aa6.12□□□□□ -1.43
VIM-202ENST00000421459 BET1O15155 118 aa6.12□□□□□ -1.43
VIM-202ENST00000421459 JTBO76095 146 aa6.12□□□□□ -1.43
VIM-202ENST00000421459 SPDEFO95238 335 aa6.12□□□□□ -1.43
VIM-202ENST00000421459 HLA-AP01891 365 aaKnown RBP6.12□□□□□ -1.43
VIM-202ENST00000421459 APOA2P02652 100 aa6.12□□□□□ -1.43
VIM-202ENST00000421459 CD1AP06126 327 aa6.12□□□□□ -1.43
VIM-202ENST00000421459 UBBP0CG47 229 aa6.12□□□□□ -1.43
VIM-202ENST00000421459 SRMP19623 302 aa6.12□□□□□ -1.43
VIM-202ENST00000421459 WNT4P56705 351 aa6.12□□□□□ -1.43
VIM-202ENST00000421459 ZNF45Q02386 682 aa6.12□□□□□ -1.43
VIM-202ENST00000421459 MED21Q13503 144 aa6.12□□□□□ -1.43
VIM-202ENST00000421459 RPEL1Q2QD12 228 aa6.12□□□□□ -1.43
VIM-202ENST00000421459 IGSF11Q5DX21 431 aa6.12□□□□□ -1.43
VIM-202ENST00000421459 PLAC9Q5JTB6 97 aa6.12□□□□□ -1.43
VIM-202ENST00000421459 TTC23Q5W5X9 447 aa6.12□□□□□ -1.43
VIM-202ENST00000421459 LCN12Q6JVE5 192 aa6.12□□□□□ -1.43
VIM-202ENST00000421459 IDO2Q6ZQW0 420 aa6.12□□□□□ -1.43
VIM-202ENST00000421459 GTSCR1Q86UQ5 136 aa6.12□□□□□ -1.43
VIM-202ENST00000421459 PDPNQ86YL7 162 aa6.12□□□□□ -1.43
VIM-202ENST00000421459 Q8N402 240 aa6.12□□□□□ -1.43
VIM-202ENST00000421459 FBLIM1Q8WUP2 373 aa6.12□□□□□ -1.43
VIM-202ENST00000421459 MAFIPQ8WZ33 124 aa6.12□□□□□ -1.43
VIM-202ENST00000421459 TMEM203Q969S6 136 aa6.12□□□□□ -1.43
VIM-202ENST00000421459 PTX4Q96A99 478 aa6.12□□□□□ -1.43
VIM-202ENST00000421459 PHB2Q99623 299 aa6.12□□□□□ -1.43
VIM-202ENST00000421459 NEURL2Q9BR09 285 aa6.12□□□□□ -1.43
VIM-202ENST00000421459 SDHAF2Q9NX18 166 aa6.12□□□□□ -1.43
VIM-202ENST00000421459 RDH8Q9NYR8 311 aa6.12□□□□□ -1.43
VIM-202ENST00000421459 AK6Q9Y3D8 172 aaKnown RBP6.12□□□□□ -1.43
VIM-202ENST00000421459 SHISA3A0PJX4 238 aa6.11□□□□□ -1.43
VIM-202ENST00000421459 PPP5D1E7EU14 171 aa6.11□□□□□ -1.43
VIM-202ENST00000421459 H3BUA1 57 aa6.11□□□□□ -1.43
VIM-202ENST00000421459 J3QRK9 145 aa6.11□□□□□ -1.43
VIM-202ENST00000421459 BPNT1O95861 308 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms