RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 SELENOTP62341 195 aa10.63□□□□□ -0.71
CLCN4-203ENST00000421085 OPN3Q9H1Y3 402 aaPredicted RBP10.63□□□□□ -0.71
CLCN4-203ENST00000421085 KCNMB2Q9Y691 235 aa10.63□□□□□ -0.71
CLCN4-203ENST00000421085 KLK10O43240 276 aa10.63□□□□□ -0.71
CLCN4-203ENST00000421085 FBXW9Q5XUX1 488 aa10.63□□□□□ -0.71
CLCN4-203ENST00000421085 SMIM8Q96KF7 97 aa10.63□□□□□ -0.71
CLCN4-203ENST00000421085 TBL2Q9Y4P3 447 aaKnown RBP10.63□□□□□ -0.71
CLCN4-203ENST00000421085 INO80CQ6PI98 192 aaPredicted RBP10.63□□□□□ -0.71
CLCN4-203ENST00000421085 C8orf88P0DMB2 117 aa10.63□□□□□ -0.71
CLCN4-203ENST00000421085 FOXL2P58012 376 aa10.63□□□□□ -0.71
CLCN4-203ENST00000421085 RPL31P62899 125 aaKnown RBP10.63□□□□□ -0.71
CLCN4-203ENST00000421085 TMEM78Q5T7P6 136 aa10.63□□□□□ -0.71
CLCN4-203ENST00000421085 UBALD2Q8IYN6 164 aa10.63□□□□□ -0.71
CLCN4-203ENST00000421085 FSCN3Q9NQT6 498 aa10.63□□□□□ -0.71
CLCN4-203ENST00000421085 CGB1A6NKQ9 187 aa10.62□□□□□ -0.71
CLCN4-203ENST00000421085 ST6GALNAC6Q969X2 333 aa10.62□□□□□ -0.71
CLCN4-203ENST00000421085 IMMP2LQ96T52 175 aa10.62□□□□□ -0.71
CLCN4-203ENST00000421085 LHFPL6Q9Y693 200 aa10.62□□□□□ -0.71
CLCN4-203ENST00000421085 A0A0J9YW62 118 aa10.62□□□□□ -0.71
CLCN4-203ENST00000421085 WDYHV1Q96HA8 205 aa10.62□□□□□ -0.71
CLCN4-203ENST00000421085 FOCADQ5VW36 1801 aa10.62□□□□□ -0.71
CLCN4-203ENST00000421085 RBFOX2O43251 390 aaKnown RBP eCLIP10.62□□□□□ -0.71
CLCN4-203ENST00000421085 ITGBL1O95965 494 aaPredicted RBP10.62□□□□□ -0.71
CLCN4-203ENST00000421085 IL4P05112 153 aa10.62□□□□□ -0.71
CLCN4-203ENST00000421085 PRSS2P07478 247 aa10.62□□□□□ -0.71
CLCN4-203ENST00000421085 LGALS3P17931 250 aaKnown RBP10.62□□□□□ -0.71
CLCN4-203ENST00000421085 CENPWQ5EE01 88 aa10.62□□□□□ -0.71
CLCN4-203ENST00000421085 ZNF430Q9H8G1 570 aaPredicted RBP10.62□□□□□ -0.71
CLCN4-203ENST00000421085 RPRMQ9NS64 109 aa10.62□□□□□ -0.71
CLCN4-203ENST00000421085 SNAI2O43623 268 aa10.62□□□□□ -0.71
CLCN4-203ENST00000421085 RPL27AP46776 148 aaKnown RBP10.62□□□□□ -0.71
CLCN4-203ENST00000421085 SLC25A47Q6Q0C1 308 aa10.62□□□□□ -0.71
CLCN4-203ENST00000421085 Q96M66 194 aa10.62□□□□□ -0.71
CLCN4-203ENST00000421085 ALKBH7Q9BT30 221 aaPredicted RBP10.62□□□□□ -0.71
CLCN4-203ENST00000421085 SOX21Q9Y651 276 aaPredicted RBP10.62□□□□□ -0.71
CLCN4-203ENST00000421085 MIA3Q5JRA6 1907 aa10.62□□□□□ -0.71
CLCN4-203ENST00000421085 SCN9AQ15858 1988 aa10.62□□□□□ -0.71
CLCN4-203ENST00000421085 VENTXO95231 258 aa10.62□□□□□ -0.71
CLCN4-203ENST00000421085 CD3EP07766 207 aa10.62□□□□□ -0.71
CLCN4-203ENST00000421085 OR4D5Q8NGN0 318 aa10.62□□□□□ -0.71
CLCN4-203ENST00000421085 FAM90A10PA6NDY2 464 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 FAM90A18PA6NE21 464 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 FAM90A16PA6NEW6 464 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 FAM90A20PA6NIJ5 464 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 FAM90A8PA6NJQ4 464 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 FAM90A7PA6NKC0 464 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 FAM90A22PA8MWA6 464 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 FAM90A12PA8MX19 464 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 FAM90A5PA8MXJ8 464 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 FAM90A23PA8MXZ1 464 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 TMEM250H0YL14 139 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 S1PR2O95136 353 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 SRP19P09132 144 aaKnown RBP10.61□□□□□ -0.71
CLCN4-203ENST00000421085 FAM90A15PP0C7V4 464 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 FAM90A13PP0C7W8 464 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 FAM90A14PP0C7W9 464 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 FAM90A24PP0C7X0 464 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 CCL4P13236 92 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 EIF4EBP2Q13542 120 aaPredicted RBP10.61□□□□□ -0.71
CLCN4-203ENST00000421085 RTN4RQ9BZR6 473 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 SPOCK3Q9BQ16 436 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 WNT5BQ9H1J7 359 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 KLK15Q9H2R5 256 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 TMEM14DPA8MWL7 114 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 MGST3O14880 152 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 JOSD1Q15040 202 aaPredicted RBP10.61□□□□□ -0.71
CLCN4-203ENST00000421085 PRSS8Q16651 343 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 Q5PR19 223 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 MARS2Q96GW9 593 aaKnown RBP10.61□□□□□ -0.71
CLCN4-203ENST00000421085 RCC1LQ96I51 464 aaKnown RBP10.61□□□□□ -0.71
CLCN4-203ENST00000421085 ZNF714Q96N38 554 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 TRPM3Q9HCF6 1732 aaPredicted RBP10.61□□□□□ -0.71
CLCN4-203ENST00000421085 IGHV3-72A0A0B4J1Y9 119 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 MARCH11A6NNE9 402 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 RAMP1O60894 148 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 RND2P52198 227 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 KCNS1Q96KK3 526 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 PSMG3Q9BT73 122 aaPredicted RBP10.61□□□□□ -0.71
CLCN4-203ENST00000421085 HEXA-AS1Q9H8Q6 139 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 DLL3Q9NYJ7 618 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 RAXQ9Y2V3 346 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 ZNFX1Q9P2E3 1918 aaKnown RBP10.61□□□□□ -0.71
CLCN4-203ENST00000421085 GCHFRP30047 84 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 OR4A5Q8NH83 315 aa10.61□□□□□ -0.71
CLCN4-203ENST00000421085 H3BTX0 84 aa10.6□□□□□ -0.71
CLCN4-203ENST00000421085 FOXA3P55318 350 aaPredicted RBP10.6□□□□□ -0.71
CLCN4-203ENST00000421085 RPL8P62917 257 aaKnown RBP10.6□□□□□ -0.71
CLCN4-203ENST00000421085 KCNMB1Q16558 191 aa10.6□□□□□ -0.71
CLCN4-203ENST00000421085 LINC01590Q5TEZ4 76 aa10.6□□□□□ -0.71
CLCN4-203ENST00000421085 ABHD12Q8N2K0 398 aa10.6□□□□□ -0.71
CLCN4-203ENST00000421085 RNF222A6NCQ9 220 aa10.6□□□□□ -0.71
CLCN4-203ENST00000421085 SLC17A3O00476 420 aa10.6□□□□□ -0.71
CLCN4-203ENST00000421085 LCN2P80188 198 aa10.6□□□□□ -0.71
CLCN4-203ENST00000421085 KLRB1Q12918 225 aa10.6□□□□□ -0.71
CLCN4-203ENST00000421085 MBNL2Q5VZF2 373 aaKnown RBP10.6□□□□□ -0.71
CLCN4-203ENST00000421085 CCL13Q99616 98 aa10.6□□□□□ -0.71
CLCN4-203ENST00000421085 BEX4Q9NWD9 120 aaPredicted RBP10.6□□□□□ -0.71
CLCN4-203ENST00000421085 FGF5P12034 268 aa10.6□□□□□ -0.71
CLCN4-203ENST00000421085 HOXB1P14653 301 aaPredicted RBP10.6□□□□□ -0.71
CLCN4-203ENST00000421085 TRAV14DV4A0A0A6YYC5 116 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms