RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 H7C2Y5 167 aa8.54□□□□□ -1.04
SSBP3-206ENST00000420121 ARPC1BO15143 372 aaKnown RBP8.54□□□□□ -1.04
SSBP3-206ENST00000420121 ATP6V1G2O95670 118 aa8.54□□□□□ -1.04
SSBP3-206ENST00000420121 IGLV2-23P01705 113 aa8.54□□□□□ -1.04
SSBP3-206ENST00000420121 TFAP2AP05549 437 aa8.54□□□□□ -1.04
SSBP3-206ENST00000420121 GSTP1P09211 210 aaKnown RBP8.54□□□□□ -1.04
SSBP3-206ENST00000420121 HIST1H1DP16402 221 aaKnown RBP8.54□□□□□ -1.04
SSBP3-206ENST00000420121 GNB3P16520 340 aa8.54□□□□□ -1.04
SSBP3-206ENST00000420121 RAB3BP20337 219 aa8.54□□□□□ -1.04
SSBP3-206ENST00000420121 RAB6AP20340 208 aa8.54□□□□□ -1.04
SSBP3-206ENST00000420121 GALP22466 123 aa8.54□□□□□ -1.04
SSBP3-206ENST00000420121 CHRNA7P36544 502 aa8.54□□□□□ -1.04
SSBP3-206ENST00000420121 ZNF616Q08AN1 781 aa8.54□□□□□ -1.04
SSBP3-206ENST00000420121 VAX1Q5SQQ9 334 aa8.54□□□□□ -1.04
SSBP3-206ENST00000420121 C22orf42Q6IC83 251 aa8.54□□□□□ -1.04
SSBP3-206ENST00000420121 TMEM65Q6PI78 240 aa8.54□□□□□ -1.04
SSBP3-206ENST00000420121 SPARTQ8N0X7 666 aa8.54□□□□□ -1.04
SSBP3-206ENST00000420121 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.54□□□□□ -1.04
SSBP3-206ENST00000420121 OR1N2Q8NGR9 330 aa8.54□□□□□ -1.04
SSBP3-206ENST00000420121 MAFIPQ8WZ33 124 aa8.54□□□□□ -1.04
SSBP3-206ENST00000420121 SDHAF2Q9NX18 166 aa8.54□□□□□ -1.04
SSBP3-206ENST00000420121 METTL1Q9UBP6 276 aaKnown RBP8.54□□□□□ -1.04
SSBP3-206ENST00000420121 ZNF230Q9UIE0 474 aaPredicted RBP8.54□□□□□ -1.04
SSBP3-206ENST00000420121 FOXA2Q9Y261 457 aaPredicted RBP8.54□□□□□ -1.04
SSBP3-206ENST00000420121 SMIM30A4D0T7 59 aa8.53□□□□□ -1.04
SSBP3-206ENST00000420121 PDCD5O14737 125 aa8.53□□□□□ -1.04
SSBP3-206ENST00000420121 BET1O15155 118 aa8.53□□□□□ -1.04
SSBP3-206ENST00000420121 MRPS14O60783 128 aaKnown RBP8.53□□□□□ -1.04
SSBP3-206ENST00000420121 RAMP3O60896 148 aa8.53□□□□□ -1.04
SSBP3-206ENST00000420121 SPDEFO95238 335 aa8.53□□□□□ -1.04
SSBP3-206ENST00000420121 DIRAS3O95661 229 aa8.53□□□□□ -1.04
SSBP3-206ENST00000420121 CA2P00918 260 aa8.53□□□□□ -1.04
SSBP3-206ENST00000420121 CRYGBP07316 175 aa8.53□□□□□ -1.04
SSBP3-206ENST00000420121 OR8U8P0C7N1 319 aa8.53□□□□□ -1.04
SSBP3-206ENST00000420121 SERPINB10P48595 397 aa8.53□□□□□ -1.04
SSBP3-206ENST00000420121 MRGPRG-AS1Q2M3A8 158 aa8.53□□□□□ -1.04
SSBP3-206ENST00000420121 AKIRIN2Q53H80 203 aa8.53□□□□□ -1.04
SSBP3-206ENST00000420121 ZNF562Q6V9R5 426 aa8.53□□□□□ -1.04
SSBP3-206ENST00000420121 Q6ZS49 121 aa8.53□□□□□ -1.04
SSBP3-206ENST00000420121 PPP1R27Q86WC6 154 aa8.53□□□□□ -1.04
SSBP3-206ENST00000420121 PDPNQ86YL7 162 aa8.53□□□□□ -1.04
SSBP3-206ENST00000420121 TCTEX1D1Q8N7M0 179 aa8.53□□□□□ -1.04
SSBP3-206ENST00000420121 DCUN1D4Q92564 292 aa8.53□□□□□ -1.04
SSBP3-206ENST00000420121 PRR25Q96S07 402 aa8.53□□□□□ -1.04
SSBP3-206ENST00000420121 CLCC1Q96S66 551 aa8.53□□□□□ -1.04
SSBP3-206ENST00000420121 OR2D2Q9H210 308 aa8.53□□□□□ -1.04
SSBP3-206ENST00000420121 ZFAND3Q9H8U3 227 aa8.53□□□□□ -1.04
SSBP3-206ENST00000420121 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.53□□□□□ -1.04
SSBP3-206ENST00000420121 TXNL4BQ9NX01 149 aaKnown RBP8.53□□□□□ -1.04
SSBP3-206ENST00000420121 ZNF221Q9UK13 617 aa8.53□□□□□ -1.04
SSBP3-206ENST00000420121 A3GALT2U3KPV4 340 aa8.53□□□□□ -1.04
SSBP3-206ENST00000420121 HUWE1Q7Z6Z7 4374 aaKnown RBP8.52□□□□□ -1.04
SSBP3-206ENST00000420121 A0A075B6Q4 140 aa8.52□□□□□ -1.05
SSBP3-206ENST00000420121 IGHV4OR15-8A0A075B7B6 117 aa8.52□□□□□ -1.05
SSBP3-206ENST00000420121 A0A087WW49 117 aa8.52□□□□□ -1.05
SSBP3-206ENST00000420121 SRRM4A7MD48 611 aaKnown RBP8.52□□□□□ -1.05
SSBP3-206ENST00000420121 M0R1X1 148 aa8.52□□□□□ -1.05
SSBP3-206ENST00000420121 SLC25A17O43808 307 aa8.52□□□□□ -1.05
SSBP3-206ENST00000420121 LGALS1P09382 135 aaKnown RBP8.52□□□□□ -1.05
SSBP3-206ENST00000420121 OR8U9P0C7N5 309 aa8.52□□□□□ -1.05
SSBP3-206ENST00000420121 MYL9P24844 172 aa8.52□□□□□ -1.05
SSBP3-206ENST00000420121 FGF9P31371 208 aaPredicted RBP8.52□□□□□ -1.05
SSBP3-206ENST00000420121 RANBP1P43487 201 aa8.52□□□□□ -1.05
SSBP3-206ENST00000420121 SLURP1P55000 103 aa8.52□□□□□ -1.05
SSBP3-206ENST00000420121 RPS16P62249 146 aaKnown RBP8.52□□□□□ -1.05
SSBP3-206ENST00000420121 PJVKQ0ZLH3 352 aa8.52□□□□□ -1.05
SSBP3-206ENST00000420121 PLGLAQ15195 96 aa8.52□□□□□ -1.05
SSBP3-206ENST00000420121 SRSF7Q16629 238 aaKnown RBP eCLIP8.52□□□□□ -1.05
SSBP3-206ENST00000420121 ZNF260Q3ZCT1 412 aa8.52□□□□□ -1.05
SSBP3-206ENST00000420121 H1FOOQ8IZA3 346 aaPredicted RBP8.52□□□□□ -1.05
SSBP3-206ENST00000420121 LFNGQ8NES3 379 aa8.52□□□□□ -1.05
SSBP3-206ENST00000420121 DDB2Q92466 427 aa8.52□□□□□ -1.05
SSBP3-206ENST00000420121 DLX4Q92988 240 aaPredicted RBP8.52□□□□□ -1.05
SSBP3-206ENST00000420121 TSNAXQ99598 290 aaKnown RBP8.52□□□□□ -1.05
SSBP3-206ENST00000420121 SLC35D1Q9NTN3 355 aa8.52□□□□□ -1.05
SSBP3-206ENST00000420121 KMT2CQ8NEZ4 4911 aaKnown RBP8.51□□□□□ -1.05
SSBP3-206ENST00000420121 APOA2P02652 100 aa8.51□□□□□ -1.05
SSBP3-206ENST00000420121 GADD45AP24522 165 aa8.51□□□□□ -1.05
SSBP3-206ENST00000420121 ECI1P42126 302 aa8.51□□□□□ -1.05
SSBP3-206ENST00000420121 CD69Q07108 199 aa8.51□□□□□ -1.05
SSBP3-206ENST00000420121 TMEM177Q53S58 311 aa8.51□□□□□ -1.05
SSBP3-206ENST00000420121 ACTBL2Q562R1 376 aa8.51□□□□□ -1.05
SSBP3-206ENST00000420121 UNQ5815/PRO19632Q6UWF5 114 aa8.51□□□□□ -1.05
SSBP3-206ENST00000420121 OR10J5Q8NHC4 309 aa8.51□□□□□ -1.05
SSBP3-206ENST00000420121 ARPC1AQ92747 370 aa8.51□□□□□ -1.05
SSBP3-206ENST00000420121 FLYWCH2Q96CP2 140 aaKnown RBP8.51□□□□□ -1.05
SSBP3-206ENST00000420121 RHOVQ96L33 236 aa8.51□□□□□ -1.05
SSBP3-206ENST00000420121 ZMAT5Q9UDW3 170 aaKnown RBP8.51□□□□□ -1.05
SSBP3-206ENST00000420121 LINC00473A8K010 186 aa8.5□□□□□ -1.05
SSBP3-206ENST00000420121 NOTOA8MTQ0 251 aa8.5□□□□□ -1.05
SSBP3-206ENST00000420121 LINC01619G3V211 115 aa8.5□□□□□ -1.05
SSBP3-206ENST00000420121 OVOL1O14753 267 aa8.5□□□□□ -1.05
SSBP3-206ENST00000420121 IGHV3-11P01762 117 aa8.5□□□□□ -1.05
SSBP3-206ENST00000420121 PSMB9P28065 219 aa8.5□□□□□ -1.05
SSBP3-206ENST00000420121 DUTP33316 252 aaKnown RBP8.5□□□□□ -1.05
SSBP3-206ENST00000420121 INSL3P51460 131 aa8.5□□□□□ -1.05
SSBP3-206ENST00000420121 TMEM267Q0VDI3 215 aaPredicted RBP8.5□□□□□ -1.05
SSBP3-206ENST00000420121 FXYD3Q14802 87 aa8.5□□□□□ -1.05
SSBP3-206ENST00000420121 PYHIN1Q6K0P9 492 aa8.5□□□□□ -1.05
SSBP3-206ENST00000420121 BVESQ8NE79 360 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms