RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 UBE2KP61086 200 aa6.97□□□□□ -1.29
USP54-203ENST00000418501 POLR2GP62487 172 aaKnown RBP eCLIP6.97□□□□□ -1.29
USP54-203ENST00000418501 NMSQ5H8A3 153 aa6.97□□□□□ -1.29
USP54-203ENST00000418501 MARC2Q969Z3 335 aa6.97□□□□□ -1.29
USP54-203ENST00000418501 RNF126Q9BV68 326 aa6.97□□□□□ -1.29
USP54-203ENST00000418501 SMIM3Q9BZL3 60 aa6.97□□□□□ -1.29
USP54-203ENST00000418501 COMMD5Q9GZQ3 224 aa6.97□□□□□ -1.29
USP54-203ENST00000418501 OR5AC2Q9NZP5 309 aa6.97□□□□□ -1.29
USP54-203ENST00000418501 INTS1Q8N201 2190 aaKnown RBP6.97□□□□□ -1.29
USP54-203ENST00000418501 PPIAL4CA0A0B4J2A2 164 aa6.97□□□□□ -1.29
USP54-203ENST00000418501 PPIAL4GP0DN37 164 aa6.97□□□□□ -1.29
USP54-203ENST00000418501 LGALS7P47929 136 aa6.97□□□□□ -1.29
USP54-203ENST00000418501 GNG10P50151 68 aa6.97□□□□□ -1.29
USP54-203ENST00000418501 DSCR9P59020 149 aa6.97□□□□□ -1.29
USP54-203ENST00000418501 RPS16P62249 146 aaKnown RBP6.97□□□□□ -1.29
USP54-203ENST00000418501 PEA15Q15121 130 aa6.97□□□□□ -1.29
USP54-203ENST00000418501 PDPNQ86YL7 162 aa6.97□□□□□ -1.29
USP54-203ENST00000418501 LINC00311Q8N616 119 aa6.97□□□□□ -1.29
USP54-203ENST00000418501 OR52E5Q8NH55 327 aa6.97□□□□□ -1.29
USP54-203ENST00000418501 RPEQ96AT9 228 aa6.97□□□□□ -1.29
USP54-203ENST00000418501 FLYWCH2Q96CP2 140 aaKnown RBP6.97□□□□□ -1.29
USP54-203ENST00000418501 CLEC7AQ9BXN2 247 aa6.97□□□□□ -1.29
USP54-203ENST00000418501 RAB19A4D1S5 217 aa6.96□□□□□ -1.29
USP54-203ENST00000418501 MT-CO2P00403 227 aa6.96□□□□□ -1.29
USP54-203ENST00000418501 OR2B8PP59922 312 aa6.96□□□□□ -1.29
USP54-203ENST00000418501 LINC00574Q9H8X3 128 aa6.96□□□□□ -1.29
USP54-203ENST00000418501 PLEKHA3Q9HB20 300 aa6.96□□□□□ -1.29
USP54-203ENST00000418501 METRNQ9UJH8 293 aa6.96□□□□□ -1.29
USP54-203ENST00000418501 WASHC3Q9Y3C0 194 aa6.96□□□□□ -1.29
USP54-203ENST00000418501 RNF222A6NCQ9 220 aa6.96□□□□□ -1.3
USP54-203ENST00000418501 FOXH1O75593 365 aa6.96□□□□□ -1.3
USP54-203ENST00000418501 DUTP33316 252 aaKnown RBP6.96□□□□□ -1.3
USP54-203ENST00000418501 OR2B11Q5JQS5 317 aa6.96□□□□□ -1.3
USP54-203ENST00000418501 HSD17B13Q7Z5P4 300 aaPredicted RBP6.96□□□□□ -1.3
USP54-203ENST00000418501 DTD1Q8TEA8 209 aa6.96□□□□□ -1.3
USP54-203ENST00000418501 ZNF251Q9BRH9 671 aa6.96□□□□□ -1.3
USP54-203ENST00000418501 TMEM147Q9BVK8 224 aa6.96□□□□□ -1.3
USP54-203ENST00000418501 ONECUT1Q9UBC0 465 aa6.96□□□□□ -1.3
USP54-203ENST00000418501 COMPP49747 757 aaPredicted RBP6.96□□□□□ -1.3
USP54-203ENST00000418501 TNFRSF9Q07011 255 aa6.96□□□□□ -1.3
USP54-203ENST00000418501 MSMPQ1L6U9 139 aa6.96□□□□□ -1.3
USP54-203ENST00000418501 SPANXN5Q5MJ07 72 aa6.96□□□□□ -1.3
USP54-203ENST00000418501 NCR3LG1Q68D85 454 aa6.96□□□□□ -1.3
USP54-203ENST00000418501 S100A7AQ86SG5 101 aa6.96□□□□□ -1.3
USP54-203ENST00000418501 DMRTC2Q8IXT2 367 aaPredicted RBP6.96□□□□□ -1.3
USP54-203ENST00000418501 TMEM252Q8N6L7 170 aa6.96□□□□□ -1.3
USP54-203ENST00000418501 PIMREGQ9BSJ6 248 aa6.96□□□□□ -1.3
USP54-203ENST00000418501 MAGT1Q9H0U3 335 aa6.96□□□□□ -1.3
USP54-203ENST00000418501 LIME1Q9H400 295 aa6.96□□□□□ -1.3
USP54-203ENST00000418501 LOC105371242A0A075B767 164 aa6.95□□□□□ -1.3
USP54-203ENST00000418501 MARCH11A6NNE9 402 aa6.95□□□□□ -1.3
USP54-203ENST00000418501 M0R1W7 72 aa6.95□□□□□ -1.3
USP54-203ENST00000418501 IFNA4P05014 189 aa6.95□□□□□ -1.3
USP54-203ENST00000418501 PPT1P50897 306 aa6.95□□□□□ -1.3
USP54-203ENST00000418501 IL15RAQ13261 267 aa6.95□□□□□ -1.3
USP54-203ENST00000418501 DTX2Q86UW9 622 aa6.95□□□□□ -1.3
USP54-203ENST00000418501 LINC00518Q8N0U6 118 aa6.95□□□□□ -1.3
USP54-203ENST00000418501 LHX4Q969G2 390 aa6.95□□□□□ -1.3
USP54-203ENST00000418501 DCTN5Q9BTE1 182 aa6.95□□□□□ -1.3
USP54-203ENST00000418501 KIAA1456Q9P272 454 aa6.95□□□□□ -1.3
USP54-203ENST00000418501 FAM24AA6NFZ4 105 aa6.95□□□□□ -1.3
USP54-203ENST00000418501 A6NNC1 897 aa6.95□□□□□ -1.3
USP54-203ENST00000418501 S100A7P31151 101 aa6.95□□□□□ -1.3
USP54-203ENST00000418501 G6PCP35575 357 aa6.95□□□□□ -1.3
USP54-203ENST00000418501 FAM201AQ5SY85 155 aa6.95□□□□□ -1.3
USP54-203ENST00000418501 SLC25A48Q6ZT89 311 aaKnown RBP6.95□□□□□ -1.3
USP54-203ENST00000418501 ABHD12Q8N2K0 398 aa6.95□□□□□ -1.3
USP54-203ENST00000418501 OR2G3Q8NGZ4 309 aa6.95□□□□□ -1.3
USP54-203ENST00000418501 ITLN2Q8WWU7 325 aaPredicted RBP6.95□□□□□ -1.3
USP54-203ENST00000418501 GGACTQ9BVM4 153 aa6.95□□□□□ -1.3
USP54-203ENST00000418501 USF1P22415 310 aaPredicted RBP6.95□□□□□ -1.3
USP54-203ENST00000418501 CLINT1Q14677 625 aa6.95□□□□□ -1.3
USP54-203ENST00000418501 OR4C13Q8NGP0 309 aa6.95□□□□□ -1.3
USP54-203ENST00000418501 OR5C1Q8NGR4 320 aa6.95□□□□□ -1.3
USP54-203ENST00000418501 RNF5Q99942 180 aa6.95□□□□□ -1.3
USP54-203ENST00000418501 SSBP3Q9BWW4 388 aaPredicted RBP6.95□□□□□ -1.3
USP54-203ENST00000418501 TMEM133Q9H2Q1 129 aa6.95□□□□□ -1.3
USP54-203ENST00000418501 UQCC1Q9NVA1 299 aa6.95□□□□□ -1.3
USP54-203ENST00000418501 MAP1BP46821 2468 aaKnown RBP6.95□□□□□ -1.3
USP54-203ENST00000418501 OOSP1A8MZH6 123 aa6.94□□□□□ -1.3
USP54-203ENST00000418501 NDUFS8O00217 210 aa6.94□□□□□ -1.3
USP54-203ENST00000418501 MPDU1O75352 247 aa6.94□□□□□ -1.3
USP54-203ENST00000418501 SLC38A11Q08AI6 406 aa6.94□□□□□ -1.3
USP54-203ENST00000418501 ZNF616Q08AN1 781 aa6.94□□□□□ -1.3
USP54-203ENST00000418501 PLGLAQ15195 96 aa6.94□□□□□ -1.3
USP54-203ENST00000418501 ETFRF1Q6IPR1 90 aa6.94□□□□□ -1.3
USP54-203ENST00000418501 CLEC2AQ6UVW9 174 aa6.94□□□□□ -1.3
USP54-203ENST00000418501 TMED6Q8WW62 240 aa6.94□□□□□ -1.3
USP54-203ENST00000418501 TREM1Q9NP99 234 aa6.94□□□□□ -1.3
USP54-203ENST00000418501 FBXO24O75426 580 aa6.94□□□□□ -1.3
USP54-203ENST00000418501 S1PR2O95136 353 aa6.94□□□□□ -1.3
USP54-203ENST00000418501 SPOCK3Q9BQ16 436 aa6.94□□□□□ -1.3
USP54-203ENST00000418501 HINT2Q9BX68 163 aa6.94□□□□□ -1.3
USP54-203ENST00000418501 PATZ1Q9HBE1 687 aaKnown RBP6.94□□□□□ -1.3
USP54-203ENST00000418501 PARP11Q9NR21 331 aa6.94□□□□□ -1.3
USP54-203ENST00000418501 MMP26Q9NRE1 261 aa6.94□□□□□ -1.3
USP54-203ENST00000418501 HEATR1Q9H583 2144 aaKnown RBP6.94□□□□□ -1.3
USP54-203ENST00000418501 F12P00748 615 aaPredicted RBP6.94□□□□□ -1.3
USP54-203ENST00000418501 FABP1P07148 127 aa6.94□□□□□ -1.3
USP54-203ENST00000418501 IAPPP10997 89 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms