RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 FAM240BA0A1B0GVZ2 78 aa6.48□□□□□ -1.37
MDC1-203ENST00000417033 CENPXA8MT69 81 aa6.48□□□□□ -1.37
MDC1-203ENST00000417033 H0YJW9 148 aa6.48□□□□□ -1.37
MDC1-203ENST00000417033 PGLYRP1O75594 196 aaPredicted RBP6.48□□□□□ -1.37
MDC1-203ENST00000417033 TCRBP04435 133 aa6.48□□□□□ -1.37
MDC1-203ENST00000417033 CTSDP07339 412 aaPredicted RBP6.48□□□□□ -1.37
MDC1-203ENST00000417033 VAMP1P23763 118 aa6.48□□□□□ -1.37
MDC1-203ENST00000417033 IL3RAP26951 378 aa6.48□□□□□ -1.37
MDC1-203ENST00000417033 PIGPP57054 158 aa6.48□□□□□ -1.37
MDC1-203ENST00000417033 TAGLNQ01995 201 aaKnown RBP6.48□□□□□ -1.37
MDC1-203ENST00000417033 RBMS2Q15434 407 aaKnown RBP6.48□□□□□ -1.37
MDC1-203ENST00000417033 C9orf139Q6ZV77 190 aa6.48□□□□□ -1.37
MDC1-203ENST00000417033 MOB3BQ86TA1 216 aa6.48□□□□□ -1.37
MDC1-203ENST00000417033 TBC1D26Q86UD7 250 aa6.48□□□□□ -1.37
MDC1-203ENST00000417033 SLC38A6Q8IZM9 456 aa6.48□□□□□ -1.37
MDC1-203ENST00000417033 SIGLECL1Q8N7X8 197 aa6.48□□□□□ -1.37
MDC1-203ENST00000417033 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.48□□□□□ -1.37
MDC1-203ENST00000417033 BVESQ8NE79 360 aa6.48□□□□□ -1.37
MDC1-203ENST00000417033 ENKURQ8TC29 256 aa6.48□□□□□ -1.37
MDC1-203ENST00000417033 PIFOQ8TCI5 191 aa6.48□□□□□ -1.37
MDC1-203ENST00000417033 TCTEX1D2Q8WW35 142 aa6.48□□□□□ -1.37
MDC1-203ENST00000417033 DEDD2Q8WXF8 326 aa6.48□□□□□ -1.37
MDC1-203ENST00000417033 DDB2Q92466 427 aa6.48□□□□□ -1.37
MDC1-203ENST00000417033 RITA1Q96K30 269 aa6.48□□□□□ -1.37
MDC1-203ENST00000417033 DUX5Q96PT3 197 aa6.48□□□□□ -1.37
MDC1-203ENST00000417033 C20orf85Q9H1P6 137 aa6.48□□□□□ -1.37
MDC1-203ENST00000417033 DPAGT1Q9H3H5 408 aa6.48□□□□□ -1.37
MDC1-203ENST00000417033 PALMDQ9NP74 551 aa6.48□□□□□ -1.37
MDC1-203ENST00000417033 TNFRSF19Q9NS68 423 aa6.48□□□□□ -1.37
MDC1-203ENST00000417033 NUDT15Q9NV35 164 aa6.48□□□□□ -1.37
MDC1-203ENST00000417033 TMEM160Q9NX00 188 aa6.48□□□□□ -1.37
MDC1-203ENST00000417033 VPS13CQ709C8 3753 aa6.47□□□□□ -1.37
MDC1-203ENST00000417033 RAMP3O60896 148 aa6.47□□□□□ -1.37
MDC1-203ENST00000417033 PEX14O75381 377 aa6.47□□□□□ -1.37
MDC1-203ENST00000417033 VENTXO95231 258 aa6.47□□□□□ -1.37
MDC1-203ENST00000417033 IGHV4-59P01825 116 aa6.47□□□□□ -1.37
MDC1-203ENST00000417033 GAPDHP04406 335 aaKnown RBP6.47□□□□□ -1.37
MDC1-203ENST00000417033 IGKV1-16P04430 117 aa6.47□□□□□ -1.37
MDC1-203ENST00000417033 SNRNP70P08621 437 aaKnown RBP6.47□□□□□ -1.37
MDC1-203ENST00000417033 AKR1C4P17516 323 aa6.47□□□□□ -1.37
MDC1-203ENST00000417033 SRD5A1P18405 259 aa6.47□□□□□ -1.37
MDC1-203ENST00000417033 HNF1AP20823 631 aa6.47□□□□□ -1.37
MDC1-203ENST00000417033 CNTFRP26992 372 aa6.47□□□□□ -1.37
MDC1-203ENST00000417033 DEFA1P59665 94 aa6.47□□□□□ -1.37
MDC1-203ENST00000417033 DEFA3P59666 94 aa6.47□□□□□ -1.37
MDC1-203ENST00000417033 RND3P61587 244 aa6.47□□□□□ -1.37
MDC1-203ENST00000417033 SUPT4H1P63272 117 aaKnown RBP6.47□□□□□ -1.37
MDC1-203ENST00000417033 SRSF2Q01130 221 aaKnown RBP6.47□□□□□ -1.37
MDC1-203ENST00000417033 PPP1R1AQ13522 171 aa6.47□□□□□ -1.37
MDC1-203ENST00000417033 SURF2Q15527 256 aaPredicted RBP6.47□□□□□ -1.37
MDC1-203ENST00000417033 SLC9A3R2Q15599 337 aa6.47□□□□□ -1.37
MDC1-203ENST00000417033 LY6EQ16553 131 aa6.47□□□□□ -1.37
MDC1-203ENST00000417033 SP6Q3SY56 376 aa6.47□□□□□ -1.37
MDC1-203ENST00000417033 ABCA11PQ4W5N1 156 aa6.47□□□□□ -1.37
MDC1-203ENST00000417033 FAM71F2Q6NXP2 309 aa6.47□□□□□ -1.37
MDC1-203ENST00000417033 MZT2BQ6NZ67 158 aa6.47□□□□□ -1.37
MDC1-203ENST00000417033 CCBE1Q6UXH8 406 aaPredicted RBP6.47□□□□□ -1.37
MDC1-203ENST00000417033 KCTD9Q7L273 389 aa6.47□□□□□ -1.37
MDC1-203ENST00000417033 ZDHHC22Q8N966 263 aa6.47□□□□□ -1.37
MDC1-203ENST00000417033 OR52B4Q8NGK2 314 aa6.47□□□□□ -1.37
MDC1-203ENST00000417033 MALSU1Q96EH3 234 aa6.47□□□□□ -1.37
MDC1-203ENST00000417033 AKR1E2Q96JD6 320 aa6.47□□□□□ -1.37
MDC1-203ENST00000417033 TP53RKQ96S44 253 aa6.47□□□□□ -1.37
MDC1-203ENST00000417033 S1PR3Q99500 378 aa6.47□□□□□ -1.37
MDC1-203ENST00000417033 SLC25A21Q9BQT8 299 aaPredicted RBP6.47□□□□□ -1.37
MDC1-203ENST00000417033 SEC22CQ9BRL7 303 aa6.47□□□□□ -1.37
MDC1-203ENST00000417033 SLC35D1Q9NTN3 355 aa6.47□□□□□ -1.37
MDC1-203ENST00000417033 GAB2Q9UQC2 676 aa6.47□□□□□ -1.37
MDC1-203ENST00000417033 C14orf166Q9Y224 244 aaKnown RBP6.47□□□□□ -1.37
MDC1-203ENST00000417033 NAV3Q8IVL0 2385 aa6.47□□□□□ -1.37
MDC1-203ENST00000417033 MTORP42345 2549 aa6.47□□□□□ -1.37
MDC1-203ENST00000417033 A0A0B4J293 547 aa6.46□□□□□ -1.38
MDC1-203ENST00000417033 CRYM-AS1A6NIL9 109 aa6.46□□□□□ -1.38
MDC1-203ENST00000417033 H3BUX3 64 aa6.46□□□□□ -1.38
MDC1-203ENST00000417033 MPPED1O15442 326 aa6.46□□□□□ -1.38
MDC1-203ENST00000417033 FCGR3BO75015 233 aa6.46□□□□□ -1.38
MDC1-203ENST00000417033 S1PR2O95136 353 aa6.46□□□□□ -1.38
MDC1-203ENST00000417033 IGKV1D-33P01593 117 aa6.46□□□□□ -1.38
MDC1-203ENST00000417033 IGKV1-33P01594 117 aa6.46□□□□□ -1.38
MDC1-203ENST00000417033 IGKV1-39P01597 117 aa6.46□□□□□ -1.38
MDC1-203ENST00000417033 IGKV1D-39P04432 117 aa6.46□□□□□ -1.38
MDC1-203ENST00000417033 FBP1P09467 338 aa6.46□□□□□ -1.38
MDC1-203ENST00000417033 H2AFB2P0C5Z0 115 aa6.46□□□□□ -1.38
MDC1-203ENST00000417033 OR5AC1P0C628 307 aa6.46□□□□□ -1.38
MDC1-203ENST00000417033 RPA2P15927 270 aa6.46□□□□□ -1.38
MDC1-203ENST00000417033 CEACAM3P40198 252 aa6.46□□□□□ -1.38
MDC1-203ENST00000417033 THBS3P49746 956 aa6.46□□□□□ -1.38
MDC1-203ENST00000417033 UBE2MP61081 183 aaKnown RBP6.46□□□□□ -1.38
MDC1-203ENST00000417033 HABP2Q14520 560 aaPredicted RBP6.46□□□□□ -1.38
MDC1-203ENST00000417033 HNF4GQ14541 408 aa6.46□□□□□ -1.38
MDC1-203ENST00000417033 MSMO1Q15800 293 aa6.46□□□□□ -1.38
MDC1-203ENST00000417033 LRRC75BQ2VPJ9 315 aa6.46□□□□□ -1.38
MDC1-203ENST00000417033 KRTAP21-3Q3LHN1 58 aa6.46□□□□□ -1.38
MDC1-203ENST00000417033 ZNF585BQ52M93 769 aa6.46□□□□□ -1.38
MDC1-203ENST00000417033 ZNF66Q6ZN08 573 aa6.46□□□□□ -1.38
MDC1-203ENST00000417033 TMEM219Q86XT9 240 aa6.46□□□□□ -1.38
MDC1-203ENST00000417033 OR8H3Q8N146 312 aa6.46□□□□□ -1.38
MDC1-203ENST00000417033 CENPSQ8N2Z9 138 aa6.46□□□□□ -1.38
MDC1-203ENST00000417033 ZBTB34Q8NCN2 500 aa6.46□□□□□ -1.38
MDC1-203ENST00000417033 DUSP18Q8NEJ0 188 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms