RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 MRPS14O60783 128 aaKnown RBP13.62□□□□□ -0.23
PDLIM2-208ENST00000416159 DIRAS3O95661 229 aa13.62□□□□□ -0.23
PDLIM2-208ENST00000416159 CA2P00918 260 aa13.62□□□□□ -0.23
PDLIM2-208ENST00000416159 IGKV1-16P04430 117 aa13.62□□□□□ -0.23
PDLIM2-208ENST00000416159 FCGR3AP08637 254 aa13.62□□□□□ -0.23
PDLIM2-208ENST00000416159 LGALS1P09382 135 aaKnown RBP13.62□□□□□ -0.23
PDLIM2-208ENST00000416159 RAB3BP20337 219 aa13.62□□□□□ -0.23
PDLIM2-208ENST00000416159 GALP22466 123 aa13.62□□□□□ -0.23
PDLIM2-208ENST00000416159 OR10A3P58181 314 aa13.62□□□□□ -0.23
PDLIM2-208ENST00000416159 LINC00205P59089 165 aa13.62□□□□□ -0.23
PDLIM2-208ENST00000416159 MOGAT2Q3SYC2 334 aa13.62□□□□□ -0.23
PDLIM2-208ENST00000416159 LFNGQ8NES3 379 aa13.62□□□□□ -0.23
PDLIM2-208ENST00000416159 OR10J5Q8NHC4 309 aa13.62□□□□□ -0.23
PDLIM2-208ENST00000416159 FAM103A1Q9BTL3 118 aaKnown RBP13.62□□□□□ -0.23
PDLIM2-208ENST00000416159 CABLES2Q9BTV7 478 aa13.62□□□□□ -0.23
PDLIM2-208ENST00000416159 CENPOQ9BU64 300 aa13.62□□□□□ -0.23
PDLIM2-208ENST00000416159 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.62□□□□□ -0.23
PDLIM2-208ENST00000416159 SLC35D1Q9NTN3 355 aa13.62□□□□□ -0.23
PDLIM2-208ENST00000416159 TRBV6-7A0A0A0MS04 114 aa13.61□□□□□ -0.23
PDLIM2-208ENST00000416159 SHISA3A0PJX4 238 aa13.61□□□□□ -0.23
PDLIM2-208ENST00000416159 METTL21EPA6NDL7 271 aa13.61□□□□□ -0.23
PDLIM2-208ENST00000416159 RAB27BO00194 218 aa13.61□□□□□ -0.23
PDLIM2-208ENST00000416159 BET1O15155 118 aa13.61□□□□□ -0.23
PDLIM2-208ENST00000416159 GSTT2P0CG29 244 aa13.61□□□□□ -0.23
PDLIM2-208ENST00000416159 GSTT2BP0CG30 244 aa13.61□□□□□ -0.23
PDLIM2-208ENST00000416159 LGALS7P47929 136 aa13.61□□□□□ -0.23
PDLIM2-208ENST00000416159 TAGLNQ01995 201 aaKnown RBP13.61□□□□□ -0.23
PDLIM2-208ENST00000416159 IGSF11Q5DX21 431 aa13.61□□□□□ -0.23
PDLIM2-208ENST00000416159 WWC2-AS2Q96NR7 200 aa13.61□□□□□ -0.23
PDLIM2-208ENST00000416159 ALX4Q9H161 411 aaPredicted RBP13.61□□□□□ -0.23
PDLIM2-208ENST00000416159 SLA2Q9H6Q3 261 aa13.61□□□□□ -0.23
PDLIM2-208ENST00000416159 TPSG1Q9NRR2 321 aa13.61□□□□□ -0.23
PDLIM2-208ENST00000416159 MFNGO00587 321 aa13.6□□□□□ -0.23
PDLIM2-208ENST00000416159 OR8U9P0C7N5 309 aa13.6□□□□□ -0.23
PDLIM2-208ENST00000416159 HIST1H1DP16402 221 aaKnown RBP13.6□□□□□ -0.23
PDLIM2-208ENST00000416159 GNB3P16520 340 aa13.6□□□□□ -0.23
PDLIM2-208ENST00000416159 GABARAPL2P60520 117 aa13.6□□□□□ -0.23
PDLIM2-208ENST00000416159 FXYD3Q14802 87 aa13.6□□□□□ -0.23
PDLIM2-208ENST00000416159 ARL6IP1Q15041 203 aa13.6□□□□□ -0.23
PDLIM2-208ENST00000416159 CASTOR1Q8WTX7 329 aa13.6□□□□□ -0.23
PDLIM2-208ENST00000416159 ARPC1AQ92747 370 aa13.6□□□□□ -0.23
PDLIM2-208ENST00000416159 DLX4Q92988 240 aaPredicted RBP13.6□□□□□ -0.23
PDLIM2-208ENST00000416159 RHOVQ96L33 236 aa13.6□□□□□ -0.23
PDLIM2-208ENST00000416159 OR2D2Q9H210 308 aa13.6□□□□□ -0.23
PDLIM2-208ENST00000416159 SDHAF2Q9NX18 166 aa13.6□□□□□ -0.23
PDLIM2-208ENST00000416159 A0A075B6Q4 140 aa13.59□□□□□ -0.23
PDLIM2-208ENST00000416159 ARPC1BO15143 372 aaKnown RBP13.59□□□□□ -0.23
PDLIM2-208ENST00000416159 SLC25A17O43808 307 aa13.59□□□□□ -0.23
PDLIM2-208ENST00000416159 LY86O95711 162 aa13.59□□□□□ -0.23
PDLIM2-208ENST00000416159 HSPB1P04792 205 aaKnown RBP13.59□□□□□ -0.23
PDLIM2-208ENST00000416159 TALDO1P37837 337 aa13.59□□□□□ -0.23
PDLIM2-208ENST00000416159 SLURP1P55000 103 aa13.59□□□□□ -0.23
PDLIM2-208ENST00000416159 TPPP2P59282 170 aa13.59□□□□□ -0.23
PDLIM2-208ENST00000416159 CBX3Q13185 183 aa13.59□□□□□ -0.23
PDLIM2-208ENST00000416159 ARFRP1Q13795 201 aa13.59□□□□□ -0.23
PDLIM2-208ENST00000416159 SRSF7Q16629 238 aaKnown RBP eCLIP13.59□□□□□ -0.23
PDLIM2-208ENST00000416159 C22orf42Q6IC83 251 aa13.59□□□□□ -0.23
PDLIM2-208ENST00000416159 MS4A10Q96PG2 267 aa13.59□□□□□ -0.23
PDLIM2-208ENST00000416159 RBM7Q9Y580 266 aaKnown RBP13.59□□□□□ -0.23
PDLIM2-208ENST00000416159 DNAH9Q9NYC9 4486 aa13.58□□□□□ -0.23
PDLIM2-208ENST00000416159 IGHV4OR15-8A0A075B7B6 117 aa13.58□□□□□ -0.24
PDLIM2-208ENST00000416159 A0A087WW49 117 aa13.58□□□□□ -0.24
PDLIM2-208ENST00000416159 H3BUA1 57 aa13.58□□□□□ -0.24
PDLIM2-208ENST00000416159 SAP30O75446 220 aa13.58□□□□□ -0.24
PDLIM2-208ENST00000416159 CNIH1O95406 144 aa13.58□□□□□ -0.24
PDLIM2-208ENST00000416159 IGLV2-23P01705 113 aa13.58□□□□□ -0.24
PDLIM2-208ENST00000416159 IGHV3-11P01762 117 aa13.58□□□□□ -0.24
PDLIM2-208ENST00000416159 RRASP10301 218 aa13.58□□□□□ -0.24
PDLIM2-208ENST00000416159 SNRPBP14678 240 aaKnown RBP13.58□□□□□ -0.24
PDLIM2-208ENST00000416159 Q6ZS49 121 aa13.58□□□□□ -0.24
PDLIM2-208ENST00000416159 MAFIPQ8WZ33 124 aa13.58□□□□□ -0.24
PDLIM2-208ENST00000416159 TMEM68Q96MH6 324 aa13.58□□□□□ -0.24
PDLIM2-208ENST00000416159 GINS4Q9BRT9 223 aa13.58□□□□□ -0.24
PDLIM2-208ENST00000416159 ZNF230Q9UIE0 474 aaPredicted RBP13.58□□□□□ -0.24
PDLIM2-208ENST00000416159 A0A0B4J203 849 aa13.57□□□□□ -0.24
PDLIM2-208ENST00000416159 TRGV3P03979 118 aa13.57□□□□□ -0.24
PDLIM2-208ENST00000416159 CRYGBP07316 175 aa13.57□□□□□ -0.24
PDLIM2-208ENST00000416159 TMEM177Q53S58 311 aa13.57□□□□□ -0.24
PDLIM2-208ENST00000416159 UBE2UQ5VVX9 321 aa13.57□□□□□ -0.24
PDLIM2-208ENST00000416159 GRPEL2Q8TAA5 225 aa13.57□□□□□ -0.24
PDLIM2-208ENST00000416159 ADTRPQ96IZ2 230 aa13.57□□□□□ -0.24
PDLIM2-208ENST00000416159 HARBI1Q96MB7 349 aa13.57□□□□□ -0.24
PDLIM2-208ENST00000416159 ATG5Q9H1Y0 275 aa13.57□□□□□ -0.24
PDLIM2-208ENST00000416159 ZNF355PQ9NSJ1 428 aa13.57□□□□□ -0.24
PDLIM2-208ENST00000416159 SMAD5-AS1Q9Y6J3 95 aa13.57□□□□□ -0.24
PDLIM2-208ENST00000416159 U3KQK5 164 aa13.57□□□□□ -0.24
PDLIM2-208ENST00000416159 SHOXO15266 292 aa13.56□□□□□ -0.24
PDLIM2-208ENST00000416159 DTYMKP23919 212 aa13.56□□□□□ -0.24
PDLIM2-208ENST00000416159 FGF9P31371 208 aaPredicted RBP13.56□□□□□ -0.24
PDLIM2-208ENST00000416159 PITPNAQ00169 270 aa13.56□□□□□ -0.24
PDLIM2-208ENST00000416159 RTL8BQ17RB0 113 aa13.56□□□□□ -0.24
PDLIM2-208ENST00000416159 ACSM6Q6P461 480 aa13.56□□□□□ -0.24
PDLIM2-208ENST00000416159 H1FOOQ8IZA3 346 aaPredicted RBP13.56□□□□□ -0.24
PDLIM2-208ENST00000416159 POC5Q8NA72 575 aa13.56□□□□□ -0.24
PDLIM2-208ENST00000416159 BVESQ8NE79 360 aa13.56□□□□□ -0.24
PDLIM2-208ENST00000416159 OR6Q1Q8NGQ2 317 aa13.56□□□□□ -0.24
PDLIM2-208ENST00000416159 C5orf30Q96GV9 206 aa13.56□□□□□ -0.24
PDLIM2-208ENST00000416159 COL7A1Q02388 2944 aa13.56□□□□□ -0.24
PDLIM2-208ENST00000416159 A0A0G2JLM5 398 aa13.55□□□□□ -0.24
PDLIM2-208ENST00000416159 NOTOA8MTQ0 251 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms