RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 MT-CO3P00414 261 aa14.78□□□□□ -0.04
SDCBP-202ENST00000413219 MPLP40238 635 aa14.78□□□□□ -0.04
SDCBP-202ENST00000413219 GNB1P62873 340 aa14.78□□□□□ -0.04
SDCBP-202ENST00000413219 ZNF816Q0VGE8 651 aaPredicted RBP14.78□□□□□ -0.04
SDCBP-202ENST00000413219 NANOS1Q8WY41 292 aaKnown RBP14.78□□□□□ -0.04
SDCBP-202ENST00000413219 C5orf30Q96GV9 206 aa14.78□□□□□ -0.04
SDCBP-202ENST00000413219 TAAR6Q96RI8 345 aa14.78□□□□□ -0.04
SDCBP-202ENST00000413219 SPEGQ15772 3267 aa14.78□□□□□ -0.04
SDCBP-202ENST00000413219 PI4KAP42356 2102 aa14.78□□□□□ -0.04
SDCBP-202ENST00000413219 A0A0U1RQK1 487 aa14.78□□□□□ -0.04
SDCBP-202ENST00000413219 ZNF320A2RRD8 509 aa14.78□□□□□ -0.04
SDCBP-202ENST00000413219 SPINK14Q6IE38 97 aa14.78□□□□□ -0.04
SDCBP-202ENST00000413219 TEX38Q6PEX7 206 aa14.78□□□□□ -0.04
SDCBP-202ENST00000413219 WDR83OSQ9Y284 106 aa14.78□□□□□ -0.04
SDCBP-202ENST00000413219 TMEM210A6NLX4 147 aa14.77□□□□□ -0.04
SDCBP-202ENST00000413219 M0R143 59 aa14.77□□□□□ -0.04
SDCBP-202ENST00000413219 WISP2O76076 250 aa14.77□□□□□ -0.04
SDCBP-202ENST00000413219 CELA3AP09093 270 aa14.77□□□□□ -0.04
SDCBP-202ENST00000413219 OR10J1P30954 320 aa14.77□□□□□ -0.04
SDCBP-202ENST00000413219 PRSS8Q16651 343 aa14.77□□□□□ -0.04
SDCBP-202ENST00000413219 FIP1L1Q6UN15 594 aaKnown RBP14.77□□□□□ -0.04
SDCBP-202ENST00000413219 H2BFWTQ7Z2G1 175 aa14.77□□□□□ -0.04
SDCBP-202ENST00000413219 MRPL52Q86TS9 123 aaKnown RBP14.77□□□□□ -0.04
SDCBP-202ENST00000413219 Q8N7P7 452 aa14.77□□□□□ -0.04
SDCBP-202ENST00000413219 WDR31Q8NA23 367 aa14.77□□□□□ -0.04
SDCBP-202ENST00000413219 SNHG12Q9BXW3 62 aa14.77□□□□□ -0.04
SDCBP-202ENST00000413219 NAGKQ9UJ70 344 aa14.77□□□□□ -0.04
SDCBP-202ENST00000413219 C17orf98A8MV24 154 aa14.77□□□□□ -0.05
SDCBP-202ENST00000413219 NEURL1O76050 574 aa14.77□□□□□ -0.05
SDCBP-202ENST00000413219 SCGB1D1O95968 90 aa14.77□□□□□ -0.05
SDCBP-202ENST00000413219 BRWD1-AS2P59051 145 aa14.77□□□□□ -0.05
SDCBP-202ENST00000413219 IGFBP7Q16270 282 aa14.77□□□□□ -0.05
SDCBP-202ENST00000413219 SLC35E4Q6ICL7 350 aa14.77□□□□□ -0.05
SDCBP-202ENST00000413219 BCL2L2Q92843 193 aaPredicted RBP14.77□□□□□ -0.05
SDCBP-202ENST00000413219 ZDHHC16Q969W1 377 aa14.77□□□□□ -0.05
SDCBP-202ENST00000413219 OR51B6Q9H340 312 aa14.77□□□□□ -0.05
SDCBP-202ENST00000413219 POLR3KQ9Y2Y1 108 aaPredicted RBP14.77□□□□□ -0.05
SDCBP-202ENST00000413219 OOEPA6NGQ2 149 aa14.76□□□□□ -0.05
SDCBP-202ENST00000413219 C12orf77C9JDV5 145 aa14.76□□□□□ -0.05
SDCBP-202ENST00000413219 HAND1O96004 215 aa14.76□□□□□ -0.05
SDCBP-202ENST00000413219 OR3A1P47881 315 aa14.76□□□□□ -0.05
SDCBP-202ENST00000413219 SOX8P57073 446 aa14.76□□□□□ -0.05
SDCBP-202ENST00000413219 UBE2NP61088 152 aaKnown RBP14.76□□□□□ -0.05
SDCBP-202ENST00000413219 YPEL3P61236 119 aaPredicted RBP14.76□□□□□ -0.05
SDCBP-202ENST00000413219 OR5T1Q8NG75 326 aa14.76□□□□□ -0.05
SDCBP-202ENST00000413219 CT55Q8WUE5 264 aa14.76□□□□□ -0.05
SDCBP-202ENST00000413219 ELOVL5Q9NYP7 299 aa14.76□□□□□ -0.05
SDCBP-202ENST00000413219 KMT2EQ8IZD2 1858 aa14.76□□□□□ -0.05
SDCBP-202ENST00000413219 MPDU1O75352 247 aa14.75□□□□□ -0.05
SDCBP-202ENST00000413219 GABRA6Q16445 453 aa14.75□□□□□ -0.05
SDCBP-202ENST00000413219 SPATA46Q5T0L3 261 aa14.75□□□□□ -0.05
SDCBP-202ENST00000413219 DCAF12Q5T6F0 453 aa14.75□□□□□ -0.05
SDCBP-202ENST00000413219 MDP1Q86V88 176 aa14.75□□□□□ -0.05
SDCBP-202ENST00000413219 MYPOPQ86VE0 399 aaPredicted RBP14.75□□□□□ -0.05
SDCBP-202ENST00000413219 MCEMP1Q8IX19 187 aa14.75□□□□□ -0.05
SDCBP-202ENST00000413219 ZNF808Q8N4W9 903 aaPredicted RBP14.75□□□□□ -0.05
SDCBP-202ENST00000413219 SFRP2Q96HF1 295 aa14.75□□□□□ -0.05
SDCBP-202ENST00000413219 TRAV9-1A0A075B6T8 112 aa14.75□□□□□ -0.05
SDCBP-202ENST00000413219 C15orf62A8K5M9 175 aa14.75□□□□□ -0.05
SDCBP-202ENST00000413219 NDUFB4O95168 129 aa14.75□□□□□ -0.05
SDCBP-202ENST00000413219 CFIP05156 583 aa14.75□□□□□ -0.05
SDCBP-202ENST00000413219 CD82P27701 267 aa14.75□□□□□ -0.05
SDCBP-202ENST00000413219 TBC1D28Q2M2D7 210 aa14.75□□□□□ -0.05
SDCBP-202ENST00000413219 C6orf15Q6UXA7 325 aaPredicted RBP14.75□□□□□ -0.05
SDCBP-202ENST00000413219 BTNL3Q6UXE8 466 aa14.75□□□□□ -0.05
SDCBP-202ENST00000413219 NINJ1Q92982 152 aa14.75□□□□□ -0.05
SDCBP-202ENST00000413219 MS4A10Q96PG2 267 aa14.75□□□□□ -0.05
SDCBP-202ENST00000413219 HES4Q9HCC6 221 aa14.75□□□□□ -0.05
SDCBP-202ENST00000413219 FREM1Q5H8C1 2179 aa14.74□□□□□ -0.05
SDCBP-202ENST00000413219 MDFIC2A0A1B0GVS7 189 aa14.74□□□□□ -0.05
SDCBP-202ENST00000413219 CDIPTO14735 213 aa14.74□□□□□ -0.05
SDCBP-202ENST00000413219 HBZP02008 142 aa14.74□□□□□ -0.05
SDCBP-202ENST00000413219 RAB4AP20338 218 aa14.74□□□□□ -0.05
SDCBP-202ENST00000413219 CD1BP29016 333 aa14.74□□□□□ -0.05
SDCBP-202ENST00000413219 ATP5G3P48201 142 aa14.74□□□□□ -0.05
SDCBP-202ENST00000413219 AARDQ4LEZ3 155 aa14.74□□□□□ -0.05
SDCBP-202ENST00000413219 ZNF766Q5HY98 468 aa14.74□□□□□ -0.05
SDCBP-202ENST00000413219 CST9LP1Q5W188 147 aa14.74□□□□□ -0.05
SDCBP-202ENST00000413219 OR52L2PQ8NGH6 319 aa14.74□□□□□ -0.05
SDCBP-202ENST00000413219 THOC3Q96J01 351 aaKnown RBP14.74□□□□□ -0.05
SDCBP-202ENST00000413219 A0A1W2PPV4 95 aa14.73□□□□□ -0.05
SDCBP-202ENST00000413219 M0QZK8 103 aa14.73□□□□□ -0.05
SDCBP-202ENST00000413219 CRYAAP02489 173 aa14.73□□□□□ -0.05
SDCBP-202ENST00000413219 C1QTNF9P0C862 333 aa14.73□□□□□ -0.05
SDCBP-202ENST00000413219 MAGEA5P43359 124 aa14.73□□□□□ -0.05
SDCBP-202ENST00000413219 SELENOTP62341 195 aa14.73□□□□□ -0.05
SDCBP-202ENST00000413219 OR1C1Q15619 314 aa14.73□□□□□ -0.05
SDCBP-202ENST00000413219 TRIP6Q15654 476 aaKnown RBP14.73□□□□□ -0.05
SDCBP-202ENST00000413219 TMEM256Q8N2U0 113 aa14.73□□□□□ -0.05
SDCBP-202ENST00000413219 SGMS2Q8NHU3 365 aa14.73□□□□□ -0.05
SDCBP-202ENST00000413219 GMPPAQ96IJ6 420 aaPredicted RBP14.73□□□□□ -0.05
SDCBP-202ENST00000413219 HSD17B10Q99714 261 aaKnown RBP14.73□□□□□ -0.05
SDCBP-202ENST00000413219 TTTY12Q9BZ98 90 aa14.73□□□□□ -0.05
SDCBP-202ENST00000413219 PLA2G3Q9NZ20 509 aa14.73□□□□□ -0.05
SDCBP-202ENST00000413219 PSPNO60542 156 aa14.73□□□□□ -0.05
SDCBP-202ENST00000413219 RBMXL2O75526 392 aaKnown RBP14.73□□□□□ -0.05
SDCBP-202ENST00000413219 OPRK1P41145 380 aa14.73□□□□□ -0.05
SDCBP-202ENST00000413219 PAFAH1B2P68402 229 aa14.73□□□□□ -0.05
SDCBP-202ENST00000413219 PCSK5Q92824 1860 aa14.73□□□□□ -0.05
SDCBP-202ENST00000413219 CBLN4Q9NTU7 201 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms