RNA–Protein interactions for RNA: ENST00000412913.1

SMARCAL1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-204ENST00000412913 HLA-AP01891 365 aaKnown RBP8.52□□□□□ -1.05
SMARCAL1-204ENST00000412913 OR5AC1P0C628 307 aa8.52□□□□□ -1.05
SMARCAL1-204ENST00000412913 AKR1C4P17516 323 aa8.52□□□□□ -1.05
SMARCAL1-204ENST00000412913 UCP1P25874 307 aa8.52□□□□□ -1.05
SMARCAL1-204ENST00000412913 HABP2Q14520 560 aaPredicted RBP8.52□□□□□ -1.05
SMARCAL1-204ENST00000412913 TMEM187Q14656 261 aa8.52□□□□□ -1.05
SMARCAL1-204ENST00000412913 TUSC1Q2TAM9 212 aa8.52□□□□□ -1.05
SMARCAL1-204ENST00000412913 GPR157Q5UAW9 335 aa8.52□□□□□ -1.05
SMARCAL1-204ENST00000412913 LYG2Q86SG7 212 aa8.52□□□□□ -1.05
SMARCAL1-204ENST00000412913 CMTM1Q8IZ96 169 aa8.52□□□□□ -1.05
SMARCAL1-204ENST00000412913 OR51H1Q8NH63 302 aa8.52□□□□□ -1.05
SMARCAL1-204ENST00000412913 LHFPL5Q8TAF8 219 aa8.52□□□□□ -1.05
SMARCAL1-204ENST00000412913 S1PR3Q99500 378 aa8.52□□□□□ -1.05
SMARCAL1-204ENST00000412913 LIN7CQ9NUP9 197 aaKnown RBP8.52□□□□□ -1.05
SMARCAL1-204ENST00000412913 DPM3Q9P2X0 92 aa8.52□□□□□ -1.05
SMARCAL1-204ENST00000412913 ALG5Q9Y673 324 aa8.52□□□□□ -1.05
SMARCAL1-204ENST00000412913 ABCA1O95477 2261 aa8.52□□□□□ -1.05
SMARCAL1-204ENST00000412913 A0A0A6YYJ9 748 aa8.51□□□□□ -1.05
SMARCAL1-204ENST00000412913 IGHV1-3A0A0C4DH29 117 aa8.51□□□□□ -1.05
SMARCAL1-204ENST00000412913 A0A0U1RQK1 487 aa8.51□□□□□ -1.05
SMARCAL1-204ENST00000412913 C3orf85A0A1B0GTC6 90 aa8.51□□□□□ -1.05
SMARCAL1-204ENST00000412913 A8MV72 311 aaPredicted RBP8.51□□□□□ -1.05
SMARCAL1-204ENST00000412913 TXNL1O43396 289 aa8.51□□□□□ -1.05
SMARCAL1-204ENST00000412913 RAMP3O60896 148 aa8.51□□□□□ -1.05
SMARCAL1-204ENST00000412913 IGKV1-39P01597 117 aa8.51□□□□□ -1.05
SMARCAL1-204ENST00000412913 IGKV1D-39P04432 117 aa8.51□□□□□ -1.05
SMARCAL1-204ENST00000412913 EPHA1P21709 976 aa8.51□□□□□ -1.05
SMARCAL1-204ENST00000412913 VAMP1P23763 118 aa8.51□□□□□ -1.05
SMARCAL1-204ENST00000412913 THBS3P49746 956 aa8.51□□□□□ -1.05
SMARCAL1-204ENST00000412913 SLC9A3R2Q15599 337 aa8.51□□□□□ -1.05
SMARCAL1-204ENST00000412913 ANKRD55Q3KP44 614 aa8.51□□□□□ -1.05
SMARCAL1-204ENST00000412913 SP6Q3SY56 376 aa8.51□□□□□ -1.05
SMARCAL1-204ENST00000412913 ZNF585BQ52M93 769 aa8.51□□□□□ -1.05
SMARCAL1-204ENST00000412913 OR2B11Q5JQS5 317 aa8.51□□□□□ -1.05
SMARCAL1-204ENST00000412913 C9orf139Q6ZV77 190 aa8.51□□□□□ -1.05
SMARCAL1-204ENST00000412913 IL17RELQ6ZVW7 336 aa8.51□□□□□ -1.05
SMARCAL1-204ENST00000412913 TGIF2LXQ8IUE1 241 aa8.51□□□□□ -1.05
SMARCAL1-204ENST00000412913 SGPP2Q8IWX5 399 aa8.51□□□□□ -1.05
SMARCAL1-204ENST00000412913 OR5AN1Q8NGI8 311 aa8.51□□□□□ -1.05
SMARCAL1-204ENST00000412913 GLYATL2Q8WU03 294 aa8.51□□□□□ -1.05
SMARCAL1-204ENST00000412913 TCTEX1D2Q8WW35 142 aa8.51□□□□□ -1.05
SMARCAL1-204ENST00000412913 RPEQ96AT9 228 aa8.51□□□□□ -1.05
SMARCAL1-204ENST00000412913 TMEM222Q9H0R3 208 aa8.51□□□□□ -1.05
SMARCAL1-204ENST00000412913 TEX13DA0A0J9YY54 714 aaPredicted RBP8.5□□□□□ -1.05
SMARCAL1-204ENST00000412913 RNF212BA8MTL3 300 aa8.5□□□□□ -1.05
SMARCAL1-204ENST00000412913 OOSP1A8MZH6 123 aa8.5□□□□□ -1.05
SMARCAL1-204ENST00000412913 TIMM23O14925 209 aa8.5□□□□□ -1.05
SMARCAL1-204ENST00000412913 LY6G6DO95868 133 aa8.5□□□□□ -1.05
SMARCAL1-204ENST00000412913 DHFRP00374 187 aa8.5□□□□□ -1.05
SMARCAL1-204ENST00000412913 GAPDHP04406 335 aaKnown RBP8.5□□□□□ -1.05
SMARCAL1-204ENST00000412913 IGKV1-16P04430 117 aa8.5□□□□□ -1.05
SMARCAL1-204ENST00000412913 CEACAM3P40198 252 aa8.5□□□□□ -1.05
SMARCAL1-204ENST00000412913 CATR1Q13166 79 aa8.5□□□□□ -1.05
SMARCAL1-204ENST00000412913 C4orf46Q504U0 113 aa8.5□□□□□ -1.05
SMARCAL1-204ENST00000412913 OR8H3Q8N146 312 aa8.5□□□□□ -1.05
SMARCAL1-204ENST00000412913 ZNF431Q8TF32 576 aaPredicted RBP8.5□□□□□ -1.05
SMARCAL1-204ENST00000412913 MITD1Q8WV92 249 aa8.5□□□□□ -1.05
SMARCAL1-204ENST00000412913 ADTRPQ96IZ2 230 aa8.5□□□□□ -1.05
SMARCAL1-204ENST00000412913 FAM212BQ9NTI7 297 aaPredicted RBP8.5□□□□□ -1.05
SMARCAL1-204ENST00000412913 TMEM160Q9NX00 188 aa8.5□□□□□ -1.05
SMARCAL1-204ENST00000412913 NUP50Q9UKX7 468 aa8.5□□□□□ -1.05
SMARCAL1-204ENST00000412913 HILPDAQ9Y5L2 63 aa8.5□□□□□ -1.05
SMARCAL1-204ENST00000412913 IGHV3-72A0A0B4J1Y9 119 aa8.49□□□□□ -1.05
SMARCAL1-204ENST00000412913 MDFIC2A0A1B0GVS7 189 aa8.49□□□□□ -1.05
SMARCAL1-204ENST00000412913 DBX1A6NMT0 343 aa8.49□□□□□ -1.05
SMARCAL1-204ENST00000412913 SNRPGP15A8MWD9 76 aa8.49□□□□□ -1.05
SMARCAL1-204ENST00000412913 RBFOX2O43251 390 aaKnown RBP eCLIP8.49□□□□□ -1.05
SMARCAL1-204ENST00000412913 B3GALNT1O75752 331 aa8.49□□□□□ -1.05
SMARCAL1-204ENST00000412913 S1PR2O95136 353 aa8.49□□□□□ -1.05
SMARCAL1-204ENST00000412913 DUS4LO95620 317 aaKnown RBP8.49□□□□□ -1.05
SMARCAL1-204ENST00000412913 IFNA2P01563 188 aa8.49□□□□□ -1.05
SMARCAL1-204ENST00000412913 CD99P14209 185 aa8.49□□□□□ -1.05
SMARCAL1-204ENST00000412913 FOSL1P15407 271 aa8.49□□□□□ -1.05
SMARCAL1-204ENST00000412913 S100GP29377 79 aa8.49□□□□□ -1.05
SMARCAL1-204ENST00000412913 LGALS4P56470 323 aa8.49□□□□□ -1.05
SMARCAL1-204ENST00000412913 SSX2Q16385 188 aa8.49□□□□□ -1.05
SMARCAL1-204ENST00000412913 FAM120AOSQ5T036 256 aa8.49□□□□□ -1.05
SMARCAL1-204ENST00000412913 LIAT1Q6ZQX7 453 aa8.49□□□□□ -1.05
SMARCAL1-204ENST00000412913 SPAG16Q8N0X2 631 aa8.49□□□□□ -1.05
SMARCAL1-204ENST00000412913 BCL6BQ8N143 479 aaPredicted RBP8.49□□□□□ -1.05
SMARCAL1-204ENST00000412913 TCTEX1D1Q8N7M0 179 aa8.49□□□□□ -1.05
SMARCAL1-204ENST00000412913 LRTM2Q8N967 370 aa8.49□□□□□ -1.05
SMARCAL1-204ENST00000412913 NANPQ8TBE9 248 aa8.49□□□□□ -1.05
SMARCAL1-204ENST00000412913 CASTOR1Q8WTX7 329 aa8.49□□□□□ -1.05
SMARCAL1-204ENST00000412913 MALSU1Q96EH3 234 aa8.49□□□□□ -1.05
SMARCAL1-204ENST00000412913 TMEM56Q96MV1 263 aa8.49□□□□□ -1.05
SMARCAL1-204ENST00000412913 YAE1D1Q9NRH1 226 aa8.49□□□□□ -1.05
SMARCAL1-204ENST00000412913 SLC35D1Q9NTN3 355 aa8.49□□□□□ -1.05
SMARCAL1-204ENST00000412913 TMEM56-RWDD3S4R434 201 aa8.49□□□□□ -1.05
SMARCAL1-204ENST00000412913 A0A0B4J2A0 478 aa8.48□□□□□ -1.05
SMARCAL1-204ENST00000412913 A0A0G2JRQ6 117 aa8.48□□□□□ -1.05
SMARCAL1-204ENST00000412913 FAM90A9PA6NNJ1 464 aa8.48□□□□□ -1.05
SMARCAL1-204ENST00000412913 CREBL2O60519 120 aaPredicted RBP8.48□□□□□ -1.05
SMARCAL1-204ENST00000412913 FCGR3BO75015 233 aa8.48□□□□□ -1.05
SMARCAL1-204ENST00000412913 VENTXO95231 258 aa8.48□□□□□ -1.05
SMARCAL1-204ENST00000412913 CDS2O95674 445 aa8.48□□□□□ -1.05
SMARCAL1-204ENST00000412913 P0C879 139 aa8.48□□□□□ -1.05
SMARCAL1-204ENST00000412913 KIR2DS2P43631 304 aa8.48□□□□□ -1.05
SMARCAL1-204ENST00000412913 BPIFB3P59826 476 aa8.48□□□□□ -1.05
SMARCAL1-204ENST00000412913 CBX3Q13185 183 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms