RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 RAB9BQ9NP90 201 aa20.32■□□□□ 0.84
VRK2-202ENST00000412104 DNASE2O00115 360 aaPredicted RBP20.31■□□□□ 0.84
VRK2-202ENST00000412104 IFNA5P01569 189 aa20.31■□□□□ 0.84
VRK2-202ENST00000412104 TCF23Q7RTU1 214 aa20.31■□□□□ 0.84
VRK2-202ENST00000412104 H2BFWTQ7Z2G1 175 aa20.31■□□□□ 0.84
VRK2-202ENST00000412104 CD300LFQ8TDQ1 290 aa20.31■□□□□ 0.84
VRK2-202ENST00000412104 ABHD14AQ9BUJ0 271 aa20.31■□□□□ 0.84
VRK2-202ENST00000412104 TRGV10A0A0A0MS01 117 aa20.31■□□□□ 0.84
VRK2-202ENST00000412104 KBTBD11-OT1A0A1B0GTJ5 212 aa20.31■□□□□ 0.84
VRK2-202ENST00000412104 TSPAN4O14817 238 aa20.31■□□□□ 0.84
VRK2-202ENST00000412104 RPL39P5Q59GN2 51 aa20.31■□□□□ 0.84
VRK2-202ENST00000412104 UTF1Q5T230 341 aa20.31■□□□□ 0.84
VRK2-202ENST00000412104 NGBQ9NPG2 151 aa20.31■□□□□ 0.84
VRK2-202ENST00000412104 CLN8Q9UBY8 286 aa20.31■□□□□ 0.84
VRK2-202ENST00000412104 FAM74A7A6NL05 159 aa20.3■□□□□ 0.84
VRK2-202ENST00000412104 MARCH11A6NNE9 402 aa20.3■□□□□ 0.84
VRK2-202ENST00000412104 M0R1X1 148 aa20.3■□□□□ 0.84
VRK2-202ENST00000412104 SLC31A2O15432 143 aa20.3■□□□□ 0.84
VRK2-202ENST00000412104 F12P00748 615 aaPredicted RBP20.3■□□□□ 0.84
VRK2-202ENST00000412104 HBG1P69891 147 aa20.3■□□□□ 0.84
VRK2-202ENST00000412104 HBG2P69892 147 aa20.3■□□□□ 0.84
VRK2-202ENST00000412104 TLE1Q04724 770 aa20.3■□□□□ 0.84
VRK2-202ENST00000412104 FAM74A3Q4VXF1 159 aa20.3■□□□□ 0.84
VRK2-202ENST00000412104 SLC25A24Q6NUK1 477 aa20.3■□□□□ 0.84
VRK2-202ENST00000412104 ZNF525Q8N782 197 aa20.3■□□□□ 0.84
VRK2-202ENST00000412104 SCRT1Q9BWW7 348 aa20.3■□□□□ 0.84
VRK2-202ENST00000412104 GFOD1Q9NXC2 390 aa20.3■□□□□ 0.84
VRK2-202ENST00000412104 GUK1Q16774 197 aa20.29■□□□□ 0.84
VRK2-202ENST00000412104 LEAP2Q969E1 77 aa20.29■□□□□ 0.84
VRK2-202ENST00000412104 ITGB1BP1O14713 200 aa20.29■□□□□ 0.84
VRK2-202ENST00000412104 FCGR3BO75015 233 aa20.29■□□□□ 0.84
VRK2-202ENST00000412104 TMEM14EPQ6UXP3 125 aa20.29■□□□□ 0.84
VRK2-202ENST00000412104 R3HDM4Q96D70 268 aa20.29■□□□□ 0.84
VRK2-202ENST00000412104 SAP30LQ9HAJ7 183 aa20.29■□□□□ 0.84
VRK2-202ENST00000412104 A0A1B0GV50 99 aa20.28■□□□□ 0.84
VRK2-202ENST00000412104 SHISA9B4DS77 424 aa20.28■□□□□ 0.84
VRK2-202ENST00000412104 RAB7AP51149 207 aa20.28■□□□□ 0.84
VRK2-202ENST00000412104 AKR1C8PQ5T2L2 129 aa20.28■□□□□ 0.84
VRK2-202ENST00000412104 THNSL2Q86YJ6 484 aa20.28■□□□□ 0.84
VRK2-202ENST00000412104 DMRTC2Q8IXT2 367 aaPredicted RBP20.28■□□□□ 0.84
VRK2-202ENST00000412104 LILRB2Q8N423 598 aa20.28■□□□□ 0.84
VRK2-202ENST00000412104 LFNGQ8NES3 379 aa20.28■□□□□ 0.84
VRK2-202ENST00000412104 TLN1Q9Y490 2541 aaKnown RBP20.28■□□□□ 0.84
VRK2-202ENST00000412104 NCMAPQ5T1S8 102 aa20.27■□□□□ 0.84
VRK2-202ENST00000412104 NKX6-3A6NJ46 265 aa20.27■□□□□ 0.84
VRK2-202ENST00000412104 SNAPINO95295 136 aa20.27■□□□□ 0.84
VRK2-202ENST00000412104 HPRT1P00492 218 aa20.27■□□□□ 0.84
VRK2-202ENST00000412104 CASP6P55212 293 aa20.27■□□□□ 0.84
VRK2-202ENST00000412104 TAGLNQ01995 201 aaKnown RBP20.27■□□□□ 0.84
VRK2-202ENST00000412104 PEA15Q15121 130 aa20.27■□□□□ 0.84
VRK2-202ENST00000412104 C17orf50Q8WW18 174 aa20.27■□□□□ 0.84
VRK2-202ENST00000412104 EGLN1Q9GZT9 426 aa20.27■□□□□ 0.84
VRK2-202ENST00000412104 EIF5A2Q9GZV4 153 aaKnown RBP20.27■□□□□ 0.84
VRK2-202ENST00000412104 FBXO7Q9Y3I1 522 aa20.27■□□□□ 0.84
VRK2-202ENST00000412104 ZNF729A6NN14 1252 aaPredicted RBP20.26■□□□□ 0.83
VRK2-202ENST00000412104 VSTM5A8MXK1 200 aa20.26■□□□□ 0.83
VRK2-202ENST00000412104 TMPRSS2O15393 492 aa20.26■□□□□ 0.83
VRK2-202ENST00000412104 RBMXL2O75526 392 aaKnown RBP20.26■□□□□ 0.83
VRK2-202ENST00000412104 CT45A1Q5HYN5 189 aa20.26■□□□□ 0.83
VRK2-202ENST00000412104 C1orf229Q6ZS94 237 aaPredicted RBP20.26■□□□□ 0.83
VRK2-202ENST00000412104 CT45A3Q8NHU0 189 aa20.26■□□□□ 0.83
VRK2-202ENST00000412104 SCGB1C1Q8TD33 95 aa20.26■□□□□ 0.83
VRK2-202ENST00000412104 DTD1Q8TEA8 209 aa20.26■□□□□ 0.83
VRK2-202ENST00000412104 OR4C12Q96R67 309 aa20.26■□□□□ 0.83
VRK2-202ENST00000412104 GAB2Q9UQC2 676 aa20.26■□□□□ 0.83
VRK2-202ENST00000412104 A0A1W2PPE3 182 aa20.25■□□□□ 0.83
VRK2-202ENST00000412104 GPR37O15354 613 aa20.25■□□□□ 0.83
VRK2-202ENST00000412104 ZG16O60844 167 aa20.25■□□□□ 0.83
VRK2-202ENST00000412104 NPBWR1P48145 328 aa20.25■□□□□ 0.83
VRK2-202ENST00000412104 PPT1P50897 306 aa20.25■□□□□ 0.83
VRK2-202ENST00000412104 ZDHHC16Q969W1 377 aa20.25■□□□□ 0.83
VRK2-202ENST00000412104 RSG1Q9BU20 258 aa20.25■□□□□ 0.83
VRK2-202ENST00000412104 IDI2-AS1Q9NZ38 188 aa20.25■□□□□ 0.83
VRK2-202ENST00000412104 NBEAQ8NFP9 2946 aa20.25■□□□□ 0.83
VRK2-202ENST00000412104 TRAV38-1A0A0B4J264 116 aa20.25■□□□□ 0.83
VRK2-202ENST00000412104 E7EQL1 145 aa20.25■□□□□ 0.83
VRK2-202ENST00000412104 RBFOX2O43251 390 aaKnown RBP eCLIP20.25■□□□□ 0.83
VRK2-202ENST00000412104 PPIHO43447 177 aaKnown RBP20.25■□□□□ 0.83
VRK2-202ENST00000412104 OR9G9P0C7N8 305 aa20.25■□□□□ 0.83
VRK2-202ENST00000412104 NFYBP25208 207 aa20.25■□□□□ 0.83
VRK2-202ENST00000412104 CA7P43166 264 aa20.25■□□□□ 0.83
VRK2-202ENST00000412104 SLC38A11Q08AI6 406 aa20.25■□□□□ 0.83
VRK2-202ENST00000412104 SPSB3Q6PJ21 355 aa20.25■□□□□ 0.83
VRK2-202ENST00000412104 CORO2AQ92828 525 aa20.25■□□□□ 0.83
VRK2-202ENST00000412104 NEUROG1Q92886 237 aa20.25■□□□□ 0.83
VRK2-202ENST00000412104 PBDC1Q9BVG4 233 aa20.25■□□□□ 0.83
VRK2-202ENST00000412104 LINC00574Q9H8X3 128 aa20.25■□□□□ 0.83
VRK2-202ENST00000412104 SAA2-SAA4A0A096LPE2 208 aa20.24■□□□□ 0.83
VRK2-202ENST00000412104 H2AFB1P0C5Y9 115 aa20.24■□□□□ 0.83
VRK2-202ENST00000412104 SAA2P0DJI9 122 aaPredicted RBP20.24■□□□□ 0.83
VRK2-202ENST00000412104 KLRB1Q12918 225 aa20.24■□□□□ 0.83
VRK2-202ENST00000412104 OR8G2PQ6IF36 304 aa20.24■□□□□ 0.83
VRK2-202ENST00000412104 DPPA3Q6W0C5 159 aa20.24■□□□□ 0.83
VRK2-202ENST00000412104 RNASE6Q93091 150 aaKnown RBP20.24■□□□□ 0.83
VRK2-202ENST00000412104 S1PR3Q99500 378 aa20.24■□□□□ 0.83
VRK2-202ENST00000412104 PRELID3BQ9Y3B1 194 aa20.24■□□□□ 0.83
VRK2-202ENST00000412104 NDUFB7P17568 137 aa20.23■□□□□ 0.83
VRK2-202ENST00000412104 LRRC75BQ2VPJ9 315 aa20.23■□□□□ 0.83
VRK2-202ENST00000412104 C1orf87Q8N0U7 546 aa20.23■□□□□ 0.83
VRK2-202ENST00000412104 ZNF436-AS1Q8NC38 126 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms