RNA–Protein interactions for RNA: ENST00000411850.5

TOM1-204, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TOM1, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-204ENST00000411850 TUBG2Q9NRH3 451 aa14.12□□□□□ -0.15
TOM1-204ENST00000411850 ZG16O60844 167 aa14.11□□□□□ -0.15
TOM1-204ENST00000411850 FGF7P21781 194 aa14.11□□□□□ -0.15
TOM1-204ENST00000411850 GABRA2P47869 451 aa14.11□□□□□ -0.15
TOM1-204ENST00000411850 NCR3LG1Q68D85 454 aa14.11□□□□□ -0.15
TOM1-204ENST00000411850 H2BFWTQ7Z2G1 175 aa14.11□□□□□ -0.15
TOM1-204ENST00000411850 WDR31Q8NA23 367 aa14.11□□□□□ -0.15
TOM1-204ENST00000411850 OR10G9Q8NGN4 311 aa14.11□□□□□ -0.15
TOM1-204ENST00000411850 OR10G7Q8NGN6 311 aa14.11□□□□□ -0.15
TOM1-204ENST00000411850 SSX3Q99909 188 aa14.11□□□□□ -0.15
TOM1-204ENST00000411850 CHD3Q12873 2000 aaKnown RBP14.11□□□□□ -0.15
TOM1-204ENST00000411850 SOD3P08294 240 aa14.11□□□□□ -0.15
TOM1-204ENST00000411850 COX5AP20674 150 aa14.11□□□□□ -0.15
TOM1-204ENST00000411850 KITLGP21583 273 aa14.11□□□□□ -0.15
TOM1-204ENST00000411850 BTNL3Q6UXE8 466 aa14.11□□□□□ -0.15
TOM1-204ENST00000411850 C1orf162Q8NEQ5 155 aaPredicted RBP14.11□□□□□ -0.15
TOM1-204ENST00000411850 TRIB1Q96RU8 372 aa14.11□□□□□ -0.15
TOM1-204ENST00000411850 HSD17B10Q99714 261 aaKnown RBP14.11□□□□□ -0.15
TOM1-204ENST00000411850 ACTR3CQ9C0K3 210 aaPredicted RBP14.11□□□□□ -0.15
TOM1-204ENST00000411850 SLC25A22Q9H936 323 aa14.11□□□□□ -0.15
TOM1-204ENST00000411850 MANBALQ9NQG1 85 aa14.11□□□□□ -0.15
TOM1-204ENST00000411850 KIAA2026Q5HYC2 2103 aa14.11□□□□□ -0.15
TOM1-204ENST00000411850 TRAV20A0A0B4J274 112 aa14.1□□□□□ -0.15
TOM1-204ENST00000411850 PRR33A8MZF0 331 aa14.1□□□□□ -0.15
TOM1-204ENST00000411850 PTBP3O95758 552 aaKnown RBP14.1□□□□□ -0.15
TOM1-204ENST00000411850 MDKP21741 143 aaPredicted RBP14.1□□□□□ -0.15
TOM1-204ENST00000411850 GNB2P62879 340 aa14.1□□□□□ -0.15
TOM1-204ENST00000411850 PAX5Q02548 391 aa14.1□□□□□ -0.15
TOM1-204ENST00000411850 LURAP1LQ8IV03 231 aa14.1□□□□□ -0.15
TOM1-204ENST00000411850 FAM186AA6NE01 2351 aa14.1□□□□□ -0.15
TOM1-204ENST00000411850 COL10A1Q03692 680 aa14.1□□□□□ -0.15
TOM1-204ENST00000411850 TCF15Q12870 199 aa14.1□□□□□ -0.15
TOM1-204ENST00000411850 FFAR4Q5NUL3 377 aa14.1□□□□□ -0.15
TOM1-204ENST00000411850 PRAMEF6Q5VXH4 476 aa14.1□□□□□ -0.15
TOM1-204ENST00000411850 ZDHHC16Q969W1 377 aa14.1□□□□□ -0.15
TOM1-204ENST00000411850 PYGO2Q9BRQ0 406 aa14.1□□□□□ -0.15
TOM1-204ENST00000411850 NPCDR1Q9BY65 106 aa14.1□□□□□ -0.15
TOM1-204ENST00000411850 OR5H1A6NKK0 313 aa14.09□□□□□ -0.15
TOM1-204ENST00000411850 LINC00473A8K010 186 aa14.09□□□□□ -0.15
TOM1-204ENST00000411850 TIMM8AO60220 97 aaPredicted RBP14.09□□□□□ -0.15
TOM1-204ENST00000411850 AGFG2O95081 481 aa14.09□□□□□ -0.15
TOM1-204ENST00000411850 HOXC12P31275 282 aa14.09□□□□□ -0.15
TOM1-204ENST00000411850 HOXA4Q00056 320 aaPredicted RBP14.09□□□□□ -0.15
TOM1-204ENST00000411850 ADIRFQ15847 76 aa14.09□□□□□ -0.15
TOM1-204ENST00000411850 SMIM21Q3B7S5 101 aa14.09□□□□□ -0.15
TOM1-204ENST00000411850 GFI1BQ5VTD9 330 aa14.09□□□□□ -0.15
TOM1-204ENST00000411850 TRAT1Q6PIZ9 186 aa14.09□□□□□ -0.15
TOM1-204ENST00000411850 OR13A1Q8NGR1 328 aa14.09□□□□□ -0.15
TOM1-204ENST00000411850 ASCL3Q9NQ33 180 aa14.09□□□□□ -0.15
TOM1-204ENST00000411850 PFN1P07737 140 aaKnown RBP14.09□□□□□ -0.15
TOM1-204ENST00000411850 SSTR5P35346 364 aa14.09□□□□□ -0.15
TOM1-204ENST00000411850 KIR2DL2P43627 348 aaPredicted RBP14.09□□□□□ -0.15
TOM1-204ENST00000411850 HTD2P86397 168 aa14.09□□□□□ -0.15
TOM1-204ENST00000411850 TFF3Q07654 80 aa14.09□□□□□ -0.15
TOM1-204ENST00000411850 HNF4GQ14541 408 aa14.09□□□□□ -0.15
TOM1-204ENST00000411850 BSXQ3C1V8 233 aa14.09□□□□□ -0.15
TOM1-204ENST00000411850 OR10A7Q8NGE5 316 aa14.09□□□□□ -0.15
TOM1-204ENST00000411850 OR10D4PQ8NGN7 298 aa14.09□□□□□ -0.15
TOM1-204ENST00000411850 GPR61Q9BZJ8 451 aa14.09□□□□□ -0.15
TOM1-204ENST00000411850 METRNQ9UJH8 293 aa14.09□□□□□ -0.15
TOM1-204ENST00000411850 WISP2O76076 250 aa14.08□□□□□ -0.16
TOM1-204ENST00000411850 TFF1P04155 84 aa14.08□□□□□ -0.16
TOM1-204ENST00000411850 RPL23P62829 140 aaKnown RBP14.08□□□□□ -0.16
TOM1-204ENST00000411850 FAM209BQ5JX69 171 aa14.08□□□□□ -0.16
TOM1-204ENST00000411850 C16orf82Q7Z2V1 217 aa14.08□□□□□ -0.16
TOM1-204ENST00000411850 ZNF709Q8N972 641 aa14.08□□□□□ -0.16
TOM1-204ENST00000411850 CNEP1R1Q8N9A8 125 aa14.08□□□□□ -0.16
TOM1-204ENST00000411850 SRD5A3Q9H8P0 318 aa14.08□□□□□ -0.16
TOM1-204ENST00000411850 WASF3Q9UPY6 502 aa14.08□□□□□ -0.16
TOM1-204ENST00000411850 A0A1B0GWJ7 208 aa14.08□□□□□ -0.16
TOM1-204ENST00000411850 C15orf65H3BRN8 121 aa14.08□□□□□ -0.16
TOM1-204ENST00000411850 HMGB3O15347 200 aaKnown RBP14.08□□□□□ -0.16
TOM1-204ENST00000411850 ADH4P08319 380 aa14.08□□□□□ -0.16
TOM1-204ENST00000411850 Q3ZCU0 254 aa14.08□□□□□ -0.16
TOM1-204ENST00000411850 DNLZQ5SXM8 178 aa14.08□□□□□ -0.16
TOM1-204ENST00000411850 RAB24Q969Q5 203 aa14.08□□□□□ -0.16
TOM1-204ENST00000411850 RPUSD4Q96CM3 377 aaKnown RBP14.08□□□□□ -0.16
TOM1-204ENST00000411850 PARLQ9H300 379 aa14.08□□□□□ -0.16
TOM1-204ENST00000411850 UFSP2Q9NUQ7 469 aa14.08□□□□□ -0.16
TOM1-204ENST00000411850 MARCH11A6NNE9 402 aa14.07□□□□□ -0.16
TOM1-204ENST00000411850 C17orf112F2Z3M2 114 aa14.07□□□□□ -0.16
TOM1-204ENST00000411850 SPINT2O43291 252 aa14.07□□□□□ -0.16
TOM1-204ENST00000411850 CECR9P0C854 216 aa14.07□□□□□ -0.16
TOM1-204ENST00000411850 PLA2G5P39877 138 aa14.07□□□□□ -0.16
TOM1-204ENST00000411850 ZNF718Q3SXZ3 478 aa14.07□□□□□ -0.16
TOM1-204ENST00000411850 AARDQ4LEZ3 155 aa14.07□□□□□ -0.16
TOM1-204ENST00000411850 DIRC2Q96SL1 478 aa14.07□□□□□ -0.16
TOM1-204ENST00000411850 PSG11Q9UQ72 335 aa14.07□□□□□ -0.16
TOM1-204ENST00000411850 GTF3C1Q12789 2109 aa14.07□□□□□ -0.16
TOM1-204ENST00000411850 ST8SIA5O15466 376 aa14.07□□□□□ -0.16
TOM1-204ENST00000411850 RBMXL2O75526 392 aaKnown RBP14.07□□□□□ -0.16
TOM1-204ENST00000411850 LY86O95711 162 aa14.07□□□□□ -0.16
TOM1-204ENST00000411850 MBNL2Q5VZF2 373 aaKnown RBP14.07□□□□□ -0.16
TOM1-204ENST00000411850 TPRX1Q8N7U7 411 aa14.07□□□□□ -0.16
TOM1-204ENST00000411850 PITPNC1Q9UKF7 332 aa14.07□□□□□ -0.16
TOM1-204ENST00000411850 IGHV3-43A0A0B4J1X8 118 aa14.06□□□□□ -0.16
TOM1-204ENST00000411850 ZNF729A6NN14 1252 aaPredicted RBP14.06□□□□□ -0.16
TOM1-204ENST00000411850 AQP7O14520 342 aa14.06□□□□□ -0.16
TOM1-204ENST00000411850 IGLV1-44P01699 117 aa14.06□□□□□ -0.16
TOM1-204ENST00000411850 IGHV3-43DP0DP04 118 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms