RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 H3BSA7 217 aa-0.7□□□□□ -2.52
RNU2-55P-201ENST00000411146 H3BT86 120 aa-0.7□□□□□ -2.52
RNU2-55P-201ENST00000411146 H7C2G1 150 aa-0.7□□□□□ -2.52
RNU2-55P-201ENST00000411146 NCR3O14931 201 aa-0.7□□□□□ -2.52
RNU2-55P-201ENST00000411146 SHOX2O60902 331 aaPredicted RBP-0.7□□□□□ -2.52
RNU2-55P-201ENST00000411146 ZMPSTE24O75844 475 aa-0.7□□□□□ -2.52
RNU2-55P-201ENST00000411146 NPYP01303 97 aa-0.7□□□□□ -2.52
RNU2-55P-201ENST00000411146 CD7P09564 240 aa-0.7□□□□□ -2.52
RNU2-55P-201ENST00000411146 GADD45AP24522 165 aa-0.7□□□□□ -2.52
RNU2-55P-201ENST00000411146 ATP6V0CP27449 155 aa-0.7□□□□□ -2.52
RNU2-55P-201ENST00000411146 ACTR1BP42025 376 aa-0.7□□□□□ -2.52
RNU2-55P-201ENST00000411146 RPL28P46779 137 aaKnown RBP-0.7□□□□□ -2.52
RNU2-55P-201ENST00000411146 RBM11P57052 281 aaKnown RBP-0.7□□□□□ -2.52
RNU2-55P-201ENST00000411146 TPI1P60174 286 aa-0.7□□□□□ -2.52
RNU2-55P-201ENST00000411146 TMEM267Q0VDI3 215 aaPredicted RBP-0.7□□□□□ -2.52
RNU2-55P-201ENST00000411146 RAB11BQ15907 218 aa-0.7□□□□□ -2.52
RNU2-55P-201ENST00000411146 TMEM249Q2WGJ8 235 aa-0.7□□□□□ -2.52
RNU2-55P-201ENST00000411146 ACTL10Q5JWF8 245 aa-0.7□□□□□ -2.52
RNU2-55P-201ENST00000411146 FAM27BQ5VT28 67 aa-0.7□□□□□ -2.52
RNU2-55P-201ENST00000411146 RESP18Q5W5W9 173 aa-0.7□□□□□ -2.52
RNU2-55P-201ENST00000411146 PLCZ1Q86YW0 608 aa-0.7□□□□□ -2.52
RNU2-55P-201ENST00000411146 OR8G5Q8NG78 346 aa-0.7□□□□□ -2.52
RNU2-55P-201ENST00000411146 OR13C9Q8NGT0 318 aa-0.7□□□□□ -2.52
RNU2-55P-201ENST00000411146 GPX8Q8TED1 209 aa-0.7□□□□□ -2.52
RNU2-55P-201ENST00000411146 GLYATL2Q8WU03 294 aa-0.7□□□□□ -2.52
RNU2-55P-201ENST00000411146 SLC7A6Q92536 515 aa-0.7□□□□□ -2.52
RNU2-55P-201ENST00000411146 LINC00526Q96FQ7 95 aa-0.7□□□□□ -2.52
RNU2-55P-201ENST00000411146 HBEGFQ99075 208 aa-0.7□□□□□ -2.52
RNU2-55P-201ENST00000411146 CISHQ9NSE2 258 aa-0.7□□□□□ -2.52
RNU2-55P-201ENST00000411146 V9GYY9 64 aa-0.7□□□□□ -2.52
RNU2-55P-201ENST00000411146 ABCA2Q9BZC7 2435 aa-0.7□□□□□ -2.52
RNU2-55P-201ENST00000411146 TRAV38-1A0A0B4J264 116 aa-0.71□□□□□ -2.52
RNU2-55P-201ENST00000411146 OR51F1A6NGY5 319 aa-0.71□□□□□ -2.52
RNU2-55P-201ENST00000411146 ITGB1BP1O14713 200 aa-0.71□□□□□ -2.52
RNU2-55P-201ENST00000411146 CPLX1O14810 134 aa-0.71□□□□□ -2.52
RNU2-55P-201ENST00000411146 MPZL2O60487 215 aa-0.71□□□□□ -2.52
RNU2-55P-201ENST00000411146 CA5AP35218 305 aa-0.71□□□□□ -2.52
RNU2-55P-201ENST00000411146 BEX3Q00994 111 aa-0.71□□□□□ -2.52
RNU2-55P-201ENST00000411146 XRCC4Q13426 336 aa-0.71□□□□□ -2.52
RNU2-55P-201ENST00000411146 CDK10Q15131 360 aa-0.71□□□□□ -2.52
RNU2-55P-201ENST00000411146 CENPWQ5EE01 88 aa-0.71□□□□□ -2.52
RNU2-55P-201ENST00000411146 C17orf78Q8N4C9 275 aa-0.71□□□□□ -2.52
RNU2-55P-201ENST00000411146 C12orf29Q8N999 325 aa-0.71□□□□□ -2.52
RNU2-55P-201ENST00000411146 OR4K17Q8NGC6 315 aa-0.71□□□□□ -2.52
RNU2-55P-201ENST00000411146 ZNF675Q8TD23 568 aa-0.71□□□□□ -2.52
RNU2-55P-201ENST00000411146 DOK4Q8TEW6 326 aa-0.71□□□□□ -2.52
RNU2-55P-201ENST00000411146 CDKL2Q92772 493 aa-0.71□□□□□ -2.52
RNU2-55P-201ENST00000411146 SFRP2Q96HF1 295 aa-0.71□□□□□ -2.52
RNU2-55P-201ENST00000411146 EIF5A2Q9GZV4 153 aaKnown RBP-0.71□□□□□ -2.52
RNU2-55P-201ENST00000411146 MED28Q9H204 178 aa-0.71□□□□□ -2.52
RNU2-55P-201ENST00000411146 LZTFL1Q9NQ48 299 aa-0.71□□□□□ -2.52
RNU2-55P-201ENST00000411146 SYNRGQ9UMZ2 1314 aa-0.71□□□□□ -2.52
RNU2-55P-201ENST00000411146 LRP2P98164 4655 aa-0.71□□□□□ -2.52
RNU2-55P-201ENST00000411146 THSD7AQ9UPZ6 1657 aa-0.72□□□□□ -2.52
RNU2-55P-201ENST00000411146 KNTC1P50748 2209 aa-0.72□□□□□ -2.52
RNU2-55P-201ENST00000411146 TRAV14DV4A0A0A6YYC5 116 aa-0.72□□□□□ -2.52
RNU2-55P-201ENST00000411146 NCF1BA6NI72 391 aaPredicted RBP-0.72□□□□□ -2.52
RNU2-55P-201ENST00000411146 NCF1CA8MVU1 366 aaPredicted RBP-0.72□□□□□ -2.52
RNU2-55P-201ENST00000411146 WRBO00258 174 aa-0.72□□□□□ -2.52
RNU2-55P-201ENST00000411146 SNX4O95219 450 aa-0.72□□□□□ -2.52
RNU2-55P-201ENST00000411146 IGLV3-27P01718 113 aa-0.72□□□□□ -2.52
RNU2-55P-201ENST00000411146 OR1E2P47887 323 aa-0.72□□□□□ -2.52
RNU2-55P-201ENST00000411146 TAS2R45P59539 299 aa-0.72□□□□□ -2.52
RNU2-55P-201ENST00000411146 TSPAN5P62079 268 aa-0.72□□□□□ -2.52
RNU2-55P-201ENST00000411146 ZNF846Q147U1 533 aa-0.72□□□□□ -2.52
RNU2-55P-201ENST00000411146 TBC1D28Q2M2D7 210 aa-0.72□□□□□ -2.52
RNU2-55P-201ENST00000411146 HIKESHIQ53FT3 197 aa-0.72□□□□□ -2.52
RNU2-55P-201ENST00000411146 Q6ZT83 130 aa-0.72□□□□□ -2.52
RNU2-55P-201ENST00000411146 SLC13A5Q86YT5 568 aaPredicted RBP-0.72□□□□□ -2.52
RNU2-55P-201ENST00000411146 PATE1Q8WXA2 126 aa-0.72□□□□□ -2.52
RNU2-55P-201ENST00000411146 OR5P2Q8WZ92 322 aa-0.72□□□□□ -2.52
RNU2-55P-201ENST00000411146 TESCQ96BS2 214 aa-0.72□□□□□ -2.52
RNU2-55P-201ENST00000411146 ABHD14BQ96IU4 210 aa-0.72□□□□□ -2.52
RNU2-55P-201ENST00000411146 SERPINI1Q99574 410 aa-0.72□□□□□ -2.52
RNU2-55P-201ENST00000411146 TIMM9Q9Y5J7 89 aa-0.72□□□□□ -2.52
RNU2-55P-201ENST00000411146 TTC28Q96AY4 2481 aa-0.72□□□□□ -2.52
RNU2-55P-201ENST00000411146 POLQO75417 2590 aa-0.72□□□□□ -2.53
RNU2-55P-201ENST00000411146 MAST2Q6P0Q8 1798 aa-0.73□□□□□ -2.53
RNU2-55P-201ENST00000411146 PHRF1Q9P1Y6 1649 aaKnown RBP-0.73□□□□□ -2.53
RNU2-55P-201ENST00000411146 IRGMA1A4Y4 181 aa-0.73□□□□□ -2.53
RNU2-55P-201ENST00000411146 SC5DO75845 299 aa-0.73□□□□□ -2.53
RNU2-55P-201ENST00000411146 PSMG1O95456 288 aa-0.73□□□□□ -2.53
RNU2-55P-201ENST00000411146 PTMAP06454 111 aaKnown RBP-0.73□□□□□ -2.53
RNU2-55P-201ENST00000411146 GABRA2P47869 451 aa-0.73□□□□□ -2.53
RNU2-55P-201ENST00000411146 DNASE1L1P49184 302 aa-0.73□□□□□ -2.53
RNU2-55P-201ENST00000411146 ATP5J2P56134 94 aa-0.73□□□□□ -2.53
RNU2-55P-201ENST00000411146 RAB14P61106 215 aa-0.73□□□□□ -2.53
RNU2-55P-201ENST00000411146 IL18Q14116 193 aa-0.73□□□□□ -2.53
RNU2-55P-201ENST00000411146 PAFAH1B3Q15102 231 aaKnown RBP-0.73□□□□□ -2.53
RNU2-55P-201ENST00000411146 TRAM1Q15629 374 aa-0.73□□□□□ -2.53
RNU2-55P-201ENST00000411146 TRIP13Q15645 432 aaPredicted RBP-0.73□□□□□ -2.53
RNU2-55P-201ENST00000411146 GDF5OSQ5U4N7 250 aa-0.73□□□□□ -2.53
RNU2-55P-201ENST00000411146 HBMQ6B0K9 141 aa-0.73□□□□□ -2.53
RNU2-55P-201ENST00000411146 C1orf174Q8IYL3 243 aa-0.73□□□□□ -2.53
RNU2-55P-201ENST00000411146 TMEM86AQ8N2M4 240 aa-0.73□□□□□ -2.53
RNU2-55P-201ENST00000411146 Q8N814 137 aa-0.73□□□□□ -2.53
RNU2-55P-201ENST00000411146 TNFAIP8L1Q8WVP5 186 aa-0.73□□□□□ -2.53
RNU2-55P-201ENST00000411146 TMA16Q96EY4 203 aaKnown RBP-0.73□□□□□ -2.53
RNU2-55P-201ENST00000411146 MAP1LC3CQ9BXW4 147 aa-0.73□□□□□ -2.53
RNU2-55P-201ENST00000411146 CACNA1HO95180 2353 aa-0.73□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms