RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 DOCK7Q96N67 2140 aa13.95□□□□□ -0.18
LIMS2-208ENST00000410011 H7BYZ3 331 aa13.95□□□□□ -0.18
LIMS2-208ENST00000410011 IGKV3-15P01624 115 aa13.95□□□□□ -0.18
LIMS2-208ENST00000410011 CD59P13987 128 aa13.95□□□□□ -0.18
LIMS2-208ENST00000410011 AESQ08117 197 aa13.95□□□□□ -0.18
LIMS2-208ENST00000410011 GUSBP1Q15486 140 aa13.95□□□□□ -0.18
LIMS2-208ENST00000410011 VASH2Q86V25 355 aa13.95□□□□□ -0.18
LIMS2-208ENST00000410011 OR5R1Q8NH85 324 aa13.95□□□□□ -0.18
LIMS2-208ENST00000410011 RAB1CQ92928 201 aa13.95□□□□□ -0.18
LIMS2-208ENST00000410011 OR5B12Q96R08 314 aa13.95□□□□□ -0.18
LIMS2-208ENST00000410011 SLC25A22Q9H936 323 aa13.95□□□□□ -0.18
LIMS2-208ENST00000410011 R4GN57 208 aa13.95□□□□□ -0.18
LIMS2-208ENST00000410011 AHCTF1Q8WYP5 2266 aa13.95□□□□□ -0.18
LIMS2-208ENST00000410011 TRBV23-1A0A0A0MS06 115 aa13.95□□□□□ -0.18
LIMS2-208ENST00000410011 LNP1A1A4G5 178 aa13.95□□□□□ -0.18
LIMS2-208ENST00000410011 FABP4P15090 132 aa13.95□□□□□ -0.18
LIMS2-208ENST00000410011 MPV17P39210 176 aa13.95□□□□□ -0.18
LIMS2-208ENST00000410011 CEBPDP49716 269 aaPredicted RBP13.95□□□□□ -0.18
LIMS2-208ENST00000410011 FAM3BP58499 235 aaPredicted RBP13.95□□□□□ -0.18
LIMS2-208ENST00000410011 PACRGQ96M98 296 aaPredicted RBP13.95□□□□□ -0.18
LIMS2-208ENST00000410011 TRIOBPQ9H2D6 2365 aa13.94□□□□□ -0.18
LIMS2-208ENST00000410011 CHD3Q12873 2000 aaKnown RBP13.94□□□□□ -0.18
LIMS2-208ENST00000410011 DVL1O14640 695 aa13.94□□□□□ -0.18
LIMS2-208ENST00000410011 HRASP01112 189 aa13.94□□□□□ -0.18
LIMS2-208ENST00000410011 TYMSP04818 313 aa13.94□□□□□ -0.18
LIMS2-208ENST00000410011 ADH4P08319 380 aa13.94□□□□□ -0.18
LIMS2-208ENST00000410011 KITLGP21583 273 aa13.94□□□□□ -0.18
LIMS2-208ENST00000410011 GALR1P47211 349 aa13.94□□□□□ -0.18
LIMS2-208ENST00000410011 ACOT6Q3I5F7 207 aaPredicted RBP13.94□□□□□ -0.18
LIMS2-208ENST00000410011 CDPF1Q6NVV7 123 aa13.94□□□□□ -0.18
LIMS2-208ENST00000410011 FAM214BQ7L5A3 538 aa13.94□□□□□ -0.18
LIMS2-208ENST00000410011 ZNF808Q8N4W9 903 aaPredicted RBP13.94□□□□□ -0.18
LIMS2-208ENST00000410011 C1orf162Q8NEQ5 155 aaPredicted RBP13.94□□□□□ -0.18
LIMS2-208ENST00000410011 RPUSD4Q96CM3 377 aaKnown RBP13.94□□□□□ -0.18
LIMS2-208ENST00000410011 NEIL1Q96FI4 390 aaPredicted RBP13.94□□□□□ -0.18
LIMS2-208ENST00000410011 ACY3Q96HD9 319 aa13.94□□□□□ -0.18
LIMS2-208ENST00000410011 MED13Q9UHV7 2174 aa13.94□□□□□ -0.18
LIMS2-208ENST00000410011 A0A1B0GWJ7 208 aa13.93□□□□□ -0.18
LIMS2-208ENST00000410011 PPP5D1E7EU14 171 aa13.93□□□□□ -0.18
LIMS2-208ENST00000410011 SRP14P37108 136 aaKnown RBP13.93□□□□□ -0.18
LIMS2-208ENST00000410011 PDLIM4P50479 330 aa13.93□□□□□ -0.18
LIMS2-208ENST00000410011 C4orf17Q53FE4 359 aa13.93□□□□□ -0.18
LIMS2-208ENST00000410011 WDR82Q6UXN9 313 aa13.93□□□□□ -0.18
LIMS2-208ENST00000410011 OR4F5Q8NH21 305 aa13.93□□□□□ -0.18
LIMS2-208ENST00000410011 OR4F4Q96R69 305 aa13.93□□□□□ -0.18
LIMS2-208ENST00000410011 WASF3Q9UPY6 502 aa13.93□□□□□ -0.18
LIMS2-208ENST00000410011 GGCTO75223 188 aaKnown RBP13.93□□□□□ -0.18
LIMS2-208ENST00000410011 IGHG3P01860 377 aa13.93□□□□□ -0.18
LIMS2-208ENST00000410011 PKIAP61925 76 aa13.93□□□□□ -0.18
LIMS2-208ENST00000410011 DEFA6Q01524 100 aa13.93□□□□□ -0.18
LIMS2-208ENST00000410011 C1orf174Q8IYL3 243 aa13.93□□□□□ -0.18
LIMS2-208ENST00000410011 Q8N7P7 452 aa13.93□□□□□ -0.18
LIMS2-208ENST00000410011 LOXL4Q96JB6 756 aa13.93□□□□□ -0.18
LIMS2-208ENST00000410011 SNX22Q96L94 193 aa13.93□□□□□ -0.18
LIMS2-208ENST00000410011 WDR83OSQ9Y284 106 aa13.93□□□□□ -0.18
LIMS2-208ENST00000410011 WNT9BO14905 357 aa13.92□□□□□ -0.18
LIMS2-208ENST00000410011 MPDU1O75352 247 aa13.92□□□□□ -0.18
LIMS2-208ENST00000410011 IFNA10P01566 189 aa13.92□□□□□ -0.18
LIMS2-208ENST00000410011 CD99P14209 185 aa13.92□□□□□ -0.18
LIMS2-208ENST00000410011 GABRA2P47869 451 aa13.92□□□□□ -0.18
LIMS2-208ENST00000410011 ARG2P78540 354 aa13.92□□□□□ -0.18
LIMS2-208ENST00000410011 TFF3Q07654 80 aa13.92□□□□□ -0.18
LIMS2-208ENST00000410011 PDLIM3Q53GG5 364 aaPredicted RBP13.92□□□□□ -0.18
LIMS2-208ENST00000410011 PDZD11Q5EBL8 140 aa13.92□□□□□ -0.18
LIMS2-208ENST00000410011 Q6ZR03 302 aa13.92□□□□□ -0.18
LIMS2-208ENST00000410011 MRGPRDQ8TDS7 321 aa13.92□□□□□ -0.18
LIMS2-208ENST00000410011 ZDHHC16Q969W1 377 aa13.92□□□□□ -0.18
LIMS2-208ENST00000410011 MARCH11A6NNE9 402 aa13.92□□□□□ -0.18
LIMS2-208ENST00000410011 LINC00473A8K010 186 aa13.92□□□□□ -0.18
LIMS2-208ENST00000410011 C15orf62A8K5M9 175 aa13.92□□□□□ -0.18
LIMS2-208ENST00000410011 PDE6DO43924 150 aa13.92□□□□□ -0.18
LIMS2-208ENST00000410011 LYZL6O75951 148 aa13.92□□□□□ -0.18
LIMS2-208ENST00000410011 PAX1P15863 534 aa13.92□□□□□ -0.18
LIMS2-208ENST00000410011 JOSD1Q15040 202 aaPredicted RBP13.92□□□□□ -0.18
LIMS2-208ENST00000410011 SMIM21Q3B7S5 101 aa13.92□□□□□ -0.18
LIMS2-208ENST00000410011 KIAA2026Q5HYC2 2103 aa13.92□□□□□ -0.18
LIMS2-208ENST00000410011 C9orf152Q5JTZ5 239 aa13.92□□□□□ -0.18
LIMS2-208ENST00000410011 FAM180AQ6UWF9 173 aa13.92□□□□□ -0.18
LIMS2-208ENST00000410011 ZNF826PQ6ZT77 177 aa13.92□□□□□ -0.18
LIMS2-208ENST00000410011 OR52E5Q8NH55 327 aa13.92□□□□□ -0.18
LIMS2-208ENST00000410011 TMEM170AQ8WVE7 144 aa13.92□□□□□ -0.18
LIMS2-208ENST00000410011 BTF3L4Q96K17 158 aa13.92□□□□□ -0.18
LIMS2-208ENST00000410011 VPS13AQ96RL7 3174 aa13.92□□□□□ -0.18
LIMS2-208ENST00000410011 C15orf65H3BRN8 121 aa13.91□□□□□ -0.18
LIMS2-208ENST00000410011 TMPRSS2O15393 492 aa13.91□□□□□ -0.18
LIMS2-208ENST00000410011 GZMHP20718 246 aa13.91□□□□□ -0.18
LIMS2-208ENST00000410011 CDC34P49427 236 aaPredicted RBP13.91□□□□□ -0.18
LIMS2-208ENST00000410011 LCN2P80188 198 aa13.91□□□□□ -0.18
LIMS2-208ENST00000410011 COL10A1Q03692 680 aa13.91□□□□□ -0.18
LIMS2-208ENST00000410011 PLA2G2CQ5R387 149 aa13.91□□□□□ -0.18
LIMS2-208ENST00000410011 OR1P1Q8NH06 330 aa13.91□□□□□ -0.18
LIMS2-208ENST00000410011 GUCD1Q96NT3 240 aa13.91□□□□□ -0.18
LIMS2-208ENST00000410011 TXNDC17Q9BRA2 123 aa13.91□□□□□ -0.18
LIMS2-208ENST00000410011 SPINT2O43291 252 aa13.91□□□□□ -0.18
LIMS2-208ENST00000410011 PAGE4O60829 102 aa13.91□□□□□ -0.18
LIMS2-208ENST00000410011 GYPAP02724 150 aa13.91□□□□□ -0.18
LIMS2-208ENST00000410011 GPX4P36969 197 aaPredicted RBP13.91□□□□□ -0.18
LIMS2-208ENST00000410011 TMPRSS3P57727 454 aa13.91□□□□□ -0.18
LIMS2-208ENST00000410011 RPP30P78346 268 aaKnown RBP13.91□□□□□ -0.18
LIMS2-208ENST00000410011 CR1LQ2VPA4 569 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms