RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 TRBV23-1A0A0A0MS06 115 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 RNF212BA8MTL3 300 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 F5H0A9 414 aaPredicted RBP4.54□□□□□ -1.68
EPHA4-202ENST00000409854 TNFSF12O43508 249 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 F12P00748 615 aaPredicted RBP4.54□□□□□ -1.68
EPHA4-202ENST00000409854 IFNA21P01568 189 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 CXCL2P19875 107 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 PSMB6P28072 239 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 RPL31P62899 125 aaKnown RBP4.54□□□□□ -1.68
EPHA4-202ENST00000409854 NMSQ5H8A3 153 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 TMEM268Q5VZI3 342 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 TMEM200BQ69YZ2 307 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 HEPN1Q6WQI6 88 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 ZNF66Q6ZN08 573 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 LYZL2Q7Z4W2 148 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 C8orf46Q8TAG6 207 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 GPHA2Q96T91 129 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 TMUB1Q9BVT8 246 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 PLEKHF2Q9H8W4 249 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 COMMD9Q9P000 198 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 RPUSD1Q9UJJ7 312 aaKnown RBP4.54□□□□□ -1.68
EPHA4-202ENST00000409854 KCNS2Q9ULS6 477 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 TNFSF18Q9UNG2 199 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 HSPB11Q9Y547 144 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 C13orf42A0A1B0GVH6 325 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 MEX3AA1L020 520 aaKnown RBP4.54□□□□□ -1.68
EPHA4-202ENST00000409854 SCO1O75880 301 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 RAB7AP51149 207 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 ZNF134P52741 427 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 CEBPGP53567 150 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 VAMP2P63027 116 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 ZNF345Q14585 488 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 ZNF585BQ52M93 769 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 UTF1Q5T230 341 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 TEX261Q6UWH6 196 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 C8orf31Q8N9H6 132 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.54□□□□□ -1.68
EPHA4-202ENST00000409854 NANPQ8TBE9 248 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 ZNF596Q8TC21 504 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 RAB24Q969Q5 203 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 RRNAD1Q96FB5 475 aaKnown RBP4.54□□□□□ -1.68
EPHA4-202ENST00000409854 ZNF714Q96N38 554 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 PFDN5Q99471 154 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 HEXA-AS1Q9H8Q6 139 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 SEPSECSQ9HD40 501 aaKnown RBP4.54□□□□□ -1.68
EPHA4-202ENST00000409854 GNG12Q9UBI6 72 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 U3KQ87 197 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 TPRP12270 2363 aaKnown RBP4.54□□□□□ -1.68
EPHA4-202ENST00000409854 UBR5O95071 2799 aaPredicted RBP4.54□□□□□ -1.68
EPHA4-202ENST00000409854 DCHS2Q6V1P9 2916 aa4.54□□□□□ -1.68
EPHA4-202ENST00000409854 A0A087X0M5 115 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 A0A1B0GX30 115 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 H0YIZ8 118 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 PROP1O75360 226 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 MMP23AO75900 390 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 IGKV1-39P01597 117 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 IGKV1D-39P04432 117 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 SLC25A6P12236 298 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 VDAC1P21796 283 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 OMGP23515 440 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 EFNA4P52798 201 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 BRWD1-AS2P59051 145 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 IAH1Q2TAA2 248 aaPredicted RBP4.53□□□□□ -1.68
EPHA4-202ENST00000409854 PRSS54Q6PEW0 395 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 MRPL52Q86TS9 123 aaKnown RBP4.53□□□□□ -1.68
EPHA4-202ENST00000409854 ODF3L1Q8IXM7 274 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 STPG2Q8N412 459 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 PIP4P2Q8N4L2 257 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 OR4D5Q8NGN0 318 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 RAB1CQ92928 201 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 HSD17B10Q99714 261 aaKnown RBP4.53□□□□□ -1.68
EPHA4-202ENST00000409854 ABHD14AQ9BUJ0 271 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 RNF126Q9BV68 326 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 NIT2Q9NQR4 276 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 UBQLN2Q9UHD9 624 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 PSG11Q9UQ72 335 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 RBM7Q9Y580 266 aaKnown RBP4.53□□□□□ -1.68
EPHA4-202ENST00000409854 LRBAP50851 2863 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 FXYD6-FXYD2A0A087WZ82 144 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 C17orf98A8MV24 154 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 LY6HO94772 140 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 RBP4P02753 201 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 CDKN1AP38936 164 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 TMEM33P57088 247 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 RPL30P62888 115 aaKnown RBP4.53□□□□□ -1.68
EPHA4-202ENST00000409854 CATR1Q13166 79 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 CT45A1Q5HYN5 189 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 PRAMEF5Q5TYX0 476 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 SLC25A48Q6ZT89 311 aaKnown RBP4.53□□□□□ -1.68
EPHA4-202ENST00000409854 ZNF695Q8IW36 515 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 C11orf42Q8N5U0 333 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 OR51H1Q8NH63 302 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 CT45A3Q8NHU0 189 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 LSM10Q969L4 123 aaKnown RBP4.53□□□□□ -1.68
EPHA4-202ENST00000409854 NEIL1Q96FI4 390 aaPredicted RBP4.53□□□□□ -1.68
EPHA4-202ENST00000409854 TIMD4Q96H15 378 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 ABHD14BQ96IU4 210 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 RALYQ9UKM9 306 aaKnown RBP4.53□□□□□ -1.68
EPHA4-202ENST00000409854 RNF150Q9ULK6 438 aa4.53□□□□□ -1.68
EPHA4-202ENST00000409854 ROS1P08922 2347 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms