RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 IGKV1-16P04430 117 aa17.7■□□□□ 0.42
PTCD3-203ENST00000409783 VSIG10L2P0DP72 767 aa17.7■□□□□ 0.42
PTCD3-203ENST00000409783 HLA-DMAP28067 261 aa17.7■□□□□ 0.42
PTCD3-203ENST00000409783 TNFSF8P32971 234 aa17.7■□□□□ 0.42
PTCD3-203ENST00000409783 RNASE12Q5GAN4 147 aaKnown RBP17.7■□□□□ 0.42
PTCD3-203ENST00000409783 C9orf152Q5JTZ5 239 aa17.7■□□□□ 0.42
PTCD3-203ENST00000409783 OR5H2Q8NGV7 314 aa17.7■□□□□ 0.42
PTCD3-203ENST00000409783 C15orf40Q8WUR7 153 aa17.7■□□□□ 0.42
PTCD3-203ENST00000409783 SOSTQ9BQB4 213 aa17.7■□□□□ 0.42
PTCD3-203ENST00000409783 MTFP1Q9UDX5 166 aa17.7■□□□□ 0.42
PTCD3-203ENST00000409783 RBMX2Q9Y388 322 aaKnown RBP17.7■□□□□ 0.42
PTCD3-203ENST00000409783 LINC01548A6NM66 108 aa17.69■□□□□ 0.42
PTCD3-203ENST00000409783 H7C2Y5 167 aa17.69■□□□□ 0.42
PTCD3-203ENST00000409783 NBR2O15453 112 aa17.69■□□□□ 0.42
PTCD3-203ENST00000409783 RBBP9O75884 186 aa17.69■□□□□ 0.42
PTCD3-203ENST00000409783 SLC22A5O76082 557 aa17.69■□□□□ 0.42
PTCD3-203ENST00000409783 HRH1P35367 487 aa17.69■□□□□ 0.42
PTCD3-203ENST00000409783 THBS3P49746 956 aa17.69■□□□□ 0.42
PTCD3-203ENST00000409783 ARSJQ5FYB0 599 aaPredicted RBP17.69■□□□□ 0.42
PTCD3-203ENST00000409783 PDPNQ86YL7 162 aa17.69■□□□□ 0.42
PTCD3-203ENST00000409783 RNF5Q99942 180 aa17.69■□□□□ 0.42
PTCD3-203ENST00000409783 SLC35D1Q9NTN3 355 aa17.69■□□□□ 0.42
PTCD3-203ENST00000409783 A3GALT2U3KPV4 340 aa17.69■□□□□ 0.42
PTCD3-203ENST00000409783 APOA2P02652 100 aa17.68■□□□□ 0.42
PTCD3-203ENST00000409783 RPL30P62888 115 aaKnown RBP17.68■□□□□ 0.42
PTCD3-203ENST00000409783 DGCR2P98153 550 aa17.68■□□□□ 0.42
PTCD3-203ENST00000409783 MSMO1Q15800 293 aa17.68■□□□□ 0.42
PTCD3-203ENST00000409783 PYHIN1Q6K0P9 492 aa17.68■□□□□ 0.42
PTCD3-203ENST00000409783 DGCR14Q96DF8 476 aaKnown RBP17.68■□□□□ 0.42
PTCD3-203ENST00000409783 ADTRPQ96IZ2 230 aa17.68■□□□□ 0.42
PTCD3-203ENST00000409783 RASL11BQ9BPW5 248 aa17.68■□□□□ 0.42
PTCD3-203ENST00000409783 HSPB9Q9BQS6 159 aa17.68■□□□□ 0.42
PTCD3-203ENST00000409783 MMP27Q9H306 513 aa17.68■□□□□ 0.42
PTCD3-203ENST00000409783 CCL28Q9NRJ3 127 aa17.68■□□□□ 0.42
PTCD3-203ENST00000409783 NDUFA13Q9P0J0 144 aa17.68■□□□□ 0.42
PTCD3-203ENST00000409783 PLXNB1O43157 2135 aa17.68■□□□□ 0.42
PTCD3-203ENST00000409783 GABARAPH6UMI1 98 aa17.67■□□□□ 0.42
PTCD3-203ENST00000409783 CTDSPLO15194 276 aa17.67■□□□□ 0.42
PTCD3-203ENST00000409783 TAGLNQ01995 201 aaKnown RBP17.67■□□□□ 0.42
PTCD3-203ENST00000409783 C5orf64Q2M2E5 130 aa17.67■□□□□ 0.42
PTCD3-203ENST00000409783 BVESQ8NE79 360 aa17.67■□□□□ 0.42
PTCD3-203ENST00000409783 SECTM1Q8WVN6 248 aa17.67■□□□□ 0.42
PTCD3-203ENST00000409783 ZNF107Q9UII5 783 aaPredicted RBP17.67■□□□□ 0.42
PTCD3-203ENST00000409783 RRHO14718 337 aa17.66■□□□□ 0.42
PTCD3-203ENST00000409783 FXYD4P59646 89 aa17.66■□□□□ 0.42
PTCD3-203ENST00000409783 MRPS10P82664 201 aaKnown RBP17.66■□□□□ 0.42
PTCD3-203ENST00000409783 IL18Q14116 193 aa17.66■□□□□ 0.42
PTCD3-203ENST00000409783 HIST2H2BDQ6DRA6 164 aa17.66■□□□□ 0.42
PTCD3-203ENST00000409783 SLC35E3Q7Z769 313 aa17.66■□□□□ 0.42
PTCD3-203ENST00000409783 SMIM4Q8WVI0 70 aa17.66■□□□□ 0.42
PTCD3-203ENST00000409783 FCAMRQ8WWV6 532 aa17.66■□□□□ 0.42
PTCD3-203ENST00000409783 MOB3AQ96BX8 217 aa17.66■□□□□ 0.42
PTCD3-203ENST00000409783 ZNF2Q9BSG1 426 aaPredicted RBP17.66■□□□□ 0.42
PTCD3-203ENST00000409783 RABL2AQ9UBK7 228 aaPredicted RBP17.66■□□□□ 0.42
PTCD3-203ENST00000409783 RABL2BQ9UNT1 228 aa17.66■□□□□ 0.42
PTCD3-203ENST00000409783 IGLV2-23P01705 113 aa17.65■□□□□ 0.42
PTCD3-203ENST00000409783 HLA-DRB1P01911 266 aa17.65■□□□□ 0.42
PTCD3-203ENST00000409783 PSG5Q15238 335 aa17.65■□□□□ 0.42
PTCD3-203ENST00000409783 TMEM177Q53S58 311 aa17.65■□□□□ 0.42
PTCD3-203ENST00000409783 VAX1Q5SQQ9 334 aa17.65■□□□□ 0.42
PTCD3-203ENST00000409783 C10orf99Q6UWK7 81 aa17.65■□□□□ 0.42
PTCD3-203ENST00000409783 FLYWCH2Q96CP2 140 aaKnown RBP17.65■□□□□ 0.42
PTCD3-203ENST00000409783 NOL4LQ96MY1 436 aaPredicted RBP17.65■□□□□ 0.42
PTCD3-203ENST00000409783 SLC5A7Q9GZV3 580 aa17.65■□□□□ 0.42
PTCD3-203ENST00000409783 FXYD6Q9H0Q3 95 aa17.65■□□□□ 0.42
PTCD3-203ENST00000409783 FBXL15Q9H469 300 aa17.65■□□□□ 0.42
PTCD3-203ENST00000409783 PEX14O75381 377 aa17.64■□□□□ 0.41
PTCD3-203ENST00000409783 RRASP10301 218 aa17.64■□□□□ 0.41
PTCD3-203ENST00000409783 BRWD1-AS2P59051 145 aa17.64■□□□□ 0.41
PTCD3-203ENST00000409783 RPS16P62249 146 aaKnown RBP17.64■□□□□ 0.41
PTCD3-203ENST00000409783 ZNF818PQ6ZRF7 136 aa17.64■□□□□ 0.41
PTCD3-203ENST00000409783 C11orf44Q8N8P7 122 aa17.64■□□□□ 0.41
PTCD3-203ENST00000409783 OR6F1Q8NGZ6 308 aa17.64■□□□□ 0.41
PTCD3-203ENST00000409783 GPHA2Q96T91 129 aa17.64■□□□□ 0.41
PTCD3-203ENST00000409783 HSD17B10Q99714 261 aaKnown RBP17.64■□□□□ 0.41
PTCD3-203ENST00000409783 KIAA1456Q9P272 454 aa17.64■□□□□ 0.41
PTCD3-203ENST00000409783 TRRAPQ9Y4A5 3859 aa17.64■□□□□ 0.41
PTCD3-203ENST00000409783 TET2Q6N021 2002 aaPredicted RBP17.64■□□□□ 0.41
PTCD3-203ENST00000409783 SRRM4A7MD48 611 aaKnown RBP17.63■□□□□ 0.41
PTCD3-203ENST00000409783 M0QYG6 137 aa17.63■□□□□ 0.41
PTCD3-203ENST00000409783 SPDEFO95238 335 aa17.63■□□□□ 0.41
PTCD3-203ENST00000409783 CD3DP04234 171 aa17.63■□□□□ 0.41
PTCD3-203ENST00000409783 CD28P10747 220 aa17.63■□□□□ 0.41
PTCD3-203ENST00000409783 GNRHRP30968 328 aa17.63■□□□□ 0.41
PTCD3-203ENST00000409783 HERV-K104P61576 105 aa17.63■□□□□ 0.41
PTCD3-203ENST00000409783 SSBP1Q04837 148 aaKnown RBP17.63■□□□□ 0.41
PTCD3-203ENST00000409783 RTL8BQ17RB0 113 aa17.63■□□□□ 0.41
PTCD3-203ENST00000409783 ACTBL2Q562R1 376 aa17.63■□□□□ 0.41
PTCD3-203ENST00000409783 ZNF66Q6ZN08 573 aa17.63■□□□□ 0.41
PTCD3-203ENST00000409783 KCTD9Q7L273 389 aa17.63■□□□□ 0.41
PTCD3-203ENST00000409783 TMEM17Q86X19 198 aa17.63■□□□□ 0.41
PTCD3-203ENST00000409783 MFSD4AQ8N468 514 aa17.63■□□□□ 0.41
PTCD3-203ENST00000409783 ZBTB34Q8NCN2 500 aa17.63■□□□□ 0.41
PTCD3-203ENST00000409783 TSNAXQ99598 290 aaKnown RBP17.63■□□□□ 0.41
PTCD3-203ENST00000409783 TINAGL1Q9GZM7 467 aaPredicted RBP17.63■□□□□ 0.41
PTCD3-203ENST00000409783 TAS2R8Q9NYW2 309 aa17.63■□□□□ 0.41
PTCD3-203ENST00000409783 LINC00527Q9UJ94 153 aa17.63■□□□□ 0.41
PTCD3-203ENST00000409783 V9GYH0 126 aa17.63■□□□□ 0.41
PTCD3-203ENST00000409783 IGHV7-81A0A0B4J1V7 117 aa17.62■□□□□ 0.41
PTCD3-203ENST00000409783 FABP12A6NFH5 140 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms