RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 OSR2Q8N2R0 312 aa3.25□□□□□ -1.89
CLK1-203ENST00000409769 OR10K1Q8NGX5 313 aa3.25□□□□□ -1.89
CLK1-203ENST00000409769 KCNG3Q8TAE7 436 aa3.25□□□□□ -1.89
CLK1-203ENST00000409769 LRRC29Q8WV35 223 aa3.25□□□□□ -1.89
CLK1-203ENST00000409769 ITLN1Q8WWA0 313 aa3.25□□□□□ -1.89
CLK1-203ENST00000409769 S100ZQ8WXG8 99 aa3.25□□□□□ -1.89
CLK1-203ENST00000409769 FAM46BQ96A09 425 aa3.25□□□□□ -1.89
CLK1-203ENST00000409769 MRPS24Q96EL2 167 aaKnown RBP3.25□□□□□ -1.89
CLK1-203ENST00000409769 C14orf79Q96F83 325 aa3.25□□□□□ -1.89
CLK1-203ENST00000409769 DIRAS2Q96HU8 199 aa3.25□□□□□ -1.89
CLK1-203ENST00000409769 CYYR1Q96J86 154 aa3.25□□□□□ -1.89
CLK1-203ENST00000409769 CEP19Q96LK0 163 aa3.25□□□□□ -1.89
CLK1-203ENST00000409769 ZNF488Q96MN9 340 aa3.25□□□□□ -1.89
CLK1-203ENST00000409769 RCHY1Q96PM5 261 aa3.25□□□□□ -1.89
CLK1-203ENST00000409769 TSC22D3Q99576 134 aa3.25□□□□□ -1.89
CLK1-203ENST00000409769 NICN1Q9BSH3 213 aa3.25□□□□□ -1.89
CLK1-203ENST00000409769 TMEM59Q9BXS4 323 aa3.25□□□□□ -1.89
CLK1-203ENST00000409769 SRRQ9GZT4 340 aa3.25□□□□□ -1.89
CLK1-203ENST00000409769 CST11Q9H112 138 aa3.25□□□□□ -1.89
CLK1-203ENST00000409769 METTL9Q9H1A3 318 aa3.25□□□□□ -1.89
CLK1-203ENST00000409769 BANF2Q9H503 90 aa3.25□□□□□ -1.89
CLK1-203ENST00000409769 FAIMQ9NVQ4 179 aa3.25□□□□□ -1.89
CLK1-203ENST00000409769 RBFOX1Q9NWB1 397 aaKnown RBP3.25□□□□□ -1.89
CLK1-203ENST00000409769 RABL2AQ9UBK7 228 aaPredicted RBP3.25□□□□□ -1.89
CLK1-203ENST00000409769 EXTL2Q9UBQ6 330 aa3.25□□□□□ -1.89
CLK1-203ENST00000409769 RAB22AQ9UL26 194 aa3.25□□□□□ -1.89
CLK1-203ENST00000409769 ING4Q9UNL4 249 aa3.25□□□□□ -1.89
CLK1-203ENST00000409769 RABL2BQ9UNT1 228 aa3.25□□□□□ -1.89
CLK1-203ENST00000409769 PLEKHA6Q9Y2H5 1048 aa3.25□□□□□ -1.89
CLK1-203ENST00000409769 POLDIP2Q9Y2S7 368 aa3.25□□□□□ -1.89
CLK1-203ENST00000409769 MALRD1Q5VYJ5 2156 aa3.25□□□□□ -1.89
CLK1-203ENST00000409769 MED13LQ71F56 2210 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 IGHV3-64DA0A0J9YX35 117 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 METTL21EPA6NDL7 271 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 FABP12A6NFH5 140 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 RPL37AP8A6NKH3 93 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 FAM25AB3EWG3 89 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 FAM25CB3EWG5 89 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 FAM25GB3EWG6 89 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 TRAPPC2LH3BP13 241 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 GEMIN2O14893 280 aaKnown RBP3.24□□□□□ -1.89
CLK1-203ENST00000409769 SOCS1O15524 211 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 RGS5O15539 181 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 GSTZ1O43708 216 aaPredicted RBP3.24□□□□□ -1.89
CLK1-203ENST00000409769 CA11O75493 328 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 RP2O75695 350 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 CRTAPO75718 401 aaPredicted RBP3.24□□□□□ -1.89
CLK1-203ENST00000409769 SCGNO76038 276 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 FSTL3O95633 263 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 MELTFP08582 738 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 KRTAP1-4P0C5Y4 121 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 GP9P14770 177 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 COX6B1P14854 86 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 HIST1H1DP16402 221 aaKnown RBP3.24□□□□□ -1.89
CLK1-203ENST00000409769 GLRA1P23415 457 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 CD40LGP29965 261 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 RBMXP38159 391 aaKnown RBP3.24□□□□□ -1.89
CLK1-203ENST00000409769 TAS2R20P59543 309 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 CCL8P80075 99 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 MRPS11P82912 194 aaKnown RBP3.24□□□□□ -1.89
CLK1-203ENST00000409769 ZNF846Q147U1 533 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 TAF9Q16594 264 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 MPV17LQ2QL34 196 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 PIGYQ3MUY2 71 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 ZNF506Q5JVG8 444 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 SPANXN2Q5MJ10 180 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 FAM201AQ5SY85 155 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 TEX36Q5VZQ5 186 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 RAB12Q6IQ22 244 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 PYHIN1Q6K0P9 492 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 Q6P435 159 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 LINC00596Q86U02 117 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 TGIF2LYQ8IUE0 185 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 Q8IYB0 196 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 FAM58AQ8N1B3 248 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 BEST4Q8NFU0 473 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 OR56B1Q8NGI3 324 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 OR10R2Q8NGX6 335 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 PCNPQ8WW12 178 aaKnown RBP3.24□□□□□ -1.89
CLK1-203ENST00000409769 YIPF5Q969M3 257 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 S100A16Q96FQ6 103 aaKnown RBP3.24□□□□□ -1.89
CLK1-203ENST00000409769 S100A13Q99584 98 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 GAL3ST1Q99999 423 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 CCDC32Q9BV29 185 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 CACNG6Q9BXT2 260 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 PECRQ9BY49 303 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 SELENOIQ9C0D9 397 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 ATG5Q9H1Y0 275 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 ZNF665Q9H7R5 613 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 AUNIPQ9H7T9 357 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 FN3KRPQ9HA64 309 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 PLEKHA3Q9HB20 300 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 HMG20AQ9NP66 347 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 DYNLRB1Q9NP97 96 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 TMEM106BQ9NUM4 274 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 UFSP2Q9NUQ7 469 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 C1orf123Q9NWV4 160 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 DCAF16Q9NXF7 216 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 CLEC5AQ9NY25 188 aa3.24□□□□□ -1.89
CLK1-203ENST00000409769 RASL12Q9NYN1 266 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms