RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 NXPH3O95157 252 aa11.48□□□□□ -0.57
GPNMB-203ENST00000409458 LIPFP07098 398 aa11.48□□□□□ -0.57
GPNMB-203ENST00000409458 S100A11P31949 105 aa11.48□□□□□ -0.57
GPNMB-203ENST00000409458 G6PCP35575 357 aa11.48□□□□□ -0.57
GPNMB-203ENST00000409458 PRB3Q04118 309 aaPredicted RBP11.48□□□□□ -0.57
GPNMB-203ENST00000409458 ZNF345Q14585 488 aa11.48□□□□□ -0.57
GPNMB-203ENST00000409458 ZNF833PQ6ZTB9 187 aa11.48□□□□□ -0.57
GPNMB-203ENST00000409458 ZNF383Q8NA42 475 aa11.48□□□□□ -0.57
GPNMB-203ENST00000409458 CACNG5Q9UF02 275 aa11.48□□□□□ -0.57
GPNMB-203ENST00000409458 RCL1Q9Y2P8 373 aaKnown RBP11.48□□□□□ -0.57
GPNMB-203ENST00000409458 POMT1Q9Y6A1 747 aa11.48□□□□□ -0.57
GPNMB-203ENST00000409458 ARID1AO14497 2285 aa11.47□□□□□ -0.57
GPNMB-203ENST00000409458 A0A1B0GU03 582 aa11.47□□□□□ -0.57
GPNMB-203ENST00000409458 MSGN1A6NI15 193 aa11.47□□□□□ -0.57
GPNMB-203ENST00000409458 RGS13O14921 159 aa11.47□□□□□ -0.57
GPNMB-203ENST00000409458 PITX3O75364 302 aa11.47□□□□□ -0.57
GPNMB-203ENST00000409458 SNAPC5O75971 98 aa11.47□□□□□ -0.57
GPNMB-203ENST00000409458 OR2F2O95006 317 aa11.47□□□□□ -0.57
GPNMB-203ENST00000409458 RBP4P02753 201 aa11.47□□□□□ -0.57
GPNMB-203ENST00000409458 P0C879 139 aa11.47□□□□□ -0.57
GPNMB-203ENST00000409458 SLC25A6P12236 298 aa11.47□□□□□ -0.57
GPNMB-203ENST00000409458 NKX2-1P43699 371 aaPredicted RBP11.47□□□□□ -0.57
GPNMB-203ENST00000409458 THBS3P49746 956 aa11.47□□□□□ -0.57
GPNMB-203ENST00000409458 OR2F1Q13607 317 aa11.47□□□□□ -0.57
GPNMB-203ENST00000409458 SMCO1Q147U7 214 aa11.47□□□□□ -0.57
GPNMB-203ENST00000409458 CXorf66Q5JRM2 361 aaPredicted RBP11.47□□□□□ -0.57
GPNMB-203ENST00000409458 ACOT7LQ6ZUV0 252 aa11.47□□□□□ -0.57
GPNMB-203ENST00000409458 ABHD12Q8N2K0 398 aa11.47□□□□□ -0.57
GPNMB-203ENST00000409458 KCNRGQ8N5I3 272 aa11.47□□□□□ -0.57
GPNMB-203ENST00000409458 OR9G1Q8NH87 305 aa11.47□□□□□ -0.57
GPNMB-203ENST00000409458 CLDND2Q8NHS1 167 aa11.47□□□□□ -0.57
GPNMB-203ENST00000409458 CD300LFQ8TDQ1 290 aa11.47□□□□□ -0.57
GPNMB-203ENST00000409458 IGHV2-26A0A0B4J1V2 119 aa11.46□□□□□ -0.57
GPNMB-203ENST00000409458 J3QKU1 62 aa11.46□□□□□ -0.57
GPNMB-203ENST00000409458 ST8SIA3O43173 380 aa11.46□□□□□ -0.57
GPNMB-203ENST00000409458 KRASP01116 189 aa11.46□□□□□ -0.57
GPNMB-203ENST00000409458 CT45A6P0DMU7 189 aa11.46□□□□□ -0.57
GPNMB-203ENST00000409458 CT45A5P0DMU8 189 aa11.46□□□□□ -0.57
GPNMB-203ENST00000409458 CT45A7P0DMV0 189 aa11.46□□□□□ -0.57
GPNMB-203ENST00000409458 ZFP36P26651 326 aaKnown RBP11.46□□□□□ -0.57
GPNMB-203ENST00000409458 KIR2DS2P43631 304 aa11.46□□□□□ -0.57
GPNMB-203ENST00000409458 ATP5J2P56134 94 aa11.46□□□□□ -0.57
GPNMB-203ENST00000409458 Q8N7P7 452 aa11.46□□□□□ -0.57
GPNMB-203ENST00000409458 INO80EQ8NBZ0 244 aaPredicted RBP11.46□□□□□ -0.57
GPNMB-203ENST00000409458 OR10X1Q8NGY0 326 aa11.46□□□□□ -0.57
GPNMB-203ENST00000409458 RBMXL1Q96E39 390 aaKnown RBP11.46□□□□□ -0.57
GPNMB-203ENST00000409458 S1PR3Q99500 378 aa11.46□□□□□ -0.57
GPNMB-203ENST00000409458 PRELID3BQ9Y3B1 194 aa11.46□□□□□ -0.57
GPNMB-203ENST00000409458 MMP24Q9Y5R2 645 aa11.46□□□□□ -0.57
GPNMB-203ENST00000409458 LRRK2Q5S007 2527 aa11.46□□□□□ -0.58
GPNMB-203ENST00000409458 A0A0D9SG52 128 aa11.46□□□□□ -0.58
GPNMB-203ENST00000409458 RBFOX2O43251 390 aaKnown RBP eCLIP11.46□□□□□ -0.58
GPNMB-203ENST00000409458 HPRT1P00492 218 aa11.46□□□□□ -0.58
GPNMB-203ENST00000409458 RLN2P04090 185 aa11.46□□□□□ -0.58
GPNMB-203ENST00000409458 C4BPBP20851 252 aa11.46□□□□□ -0.58
GPNMB-203ENST00000409458 LMO4P61968 165 aa11.46□□□□□ -0.58
GPNMB-203ENST00000409458 POLR2GP62487 172 aaKnown RBP eCLIP11.46□□□□□ -0.58
GPNMB-203ENST00000409458 DMBX1Q8NFW5 382 aa11.46□□□□□ -0.58
GPNMB-203ENST00000409458 R3HDM4Q96D70 268 aa11.46□□□□□ -0.58
GPNMB-203ENST00000409458 ADTRPQ96IZ2 230 aa11.46□□□□□ -0.58
GPNMB-203ENST00000409458 MRPL20Q9BYC9 149 aaKnown RBP11.46□□□□□ -0.58
GPNMB-203ENST00000409458 MAGT1Q9H0U3 335 aa11.46□□□□□ -0.58
GPNMB-203ENST00000409458 C11orf1Q9H5F2 150 aa11.46□□□□□ -0.58
GPNMB-203ENST00000409458 PLEKHA2Q9HB19 425 aa11.46□□□□□ -0.58
GPNMB-203ENST00000409458 ZFP57Q9NU63 452 aa11.46□□□□□ -0.58
GPNMB-203ENST00000409458 ARHGAP32A7KAX9 2087 aa11.45□□□□□ -0.58
GPNMB-203ENST00000409458 MARCH11A6NNE9 402 aa11.45□□□□□ -0.58
GPNMB-203ENST00000409458 SSSCA1O60232 199 aa11.45□□□□□ -0.58
GPNMB-203ENST00000409458 ATG12O94817 140 aa11.45□□□□□ -0.58
GPNMB-203ENST00000409458 COX7A1P24310 79 aa11.45□□□□□ -0.58
GPNMB-203ENST00000409458 REG1BP48304 166 aa11.45□□□□□ -0.58
GPNMB-203ENST00000409458 ARF6P62330 175 aa11.45□□□□□ -0.58
GPNMB-203ENST00000409458 DIAPH2-AS1Q14236 149 aa11.45□□□□□ -0.58
GPNMB-203ENST00000409458 OR4S2Q8NH73 311 aa11.45□□□□□ -0.58
GPNMB-203ENST00000409458 C10orf105Q8TEF2 133 aa11.45□□□□□ -0.58
GPNMB-203ENST00000409458 FAM168AQ92567 244 aa11.45□□□□□ -0.58
GPNMB-203ENST00000409458 ST6GALNAC6Q969X2 333 aa11.45□□□□□ -0.58
GPNMB-203ENST00000409458 PERPQ96FX8 193 aa11.45□□□□□ -0.58
GPNMB-203ENST00000409458 AQP10Q96PS8 301 aa11.45□□□□□ -0.58
GPNMB-203ENST00000409458 PIMREGQ9BSJ6 248 aa11.45□□□□□ -0.58
GPNMB-203ENST00000409458 BARX1Q9HBU1 254 aaPredicted RBP11.45□□□□□ -0.58
GPNMB-203ENST00000409458 CRYBG3Q68DQ2 2970 aa11.45□□□□□ -0.58
GPNMB-203ENST00000409458 FBN2P35556 2912 aa11.44□□□□□ -0.58
GPNMB-203ENST00000409458 A8MXK9 166 aa11.44□□□□□ -0.58
GPNMB-203ENST00000409458 E5RGE8 158 aa11.44□□□□□ -0.58
GPNMB-203ENST00000409458 M0R1W7 72 aa11.44□□□□□ -0.58
GPNMB-203ENST00000409458 TOR1AO14656 332 aa11.44□□□□□ -0.58
GPNMB-203ENST00000409458 BCL2L11O43521 198 aa11.44□□□□□ -0.58
GPNMB-203ENST00000409458 HKR1P10072 659 aa11.44□□□□□ -0.58
GPNMB-203ENST00000409458 ZNF137PP52743 207 aa11.44□□□□□ -0.58
GPNMB-203ENST00000409458 LCN2P80188 198 aa11.44□□□□□ -0.58
GPNMB-203ENST00000409458 ID3Q02535 119 aa11.44□□□□□ -0.58
GPNMB-203ENST00000409458 MIDNQ504T8 468 aa11.44□□□□□ -0.58
GPNMB-203ENST00000409458 ZNF787Q6DD87 383 aa11.44□□□□□ -0.58
GPNMB-203ENST00000409458 FAM71F2Q6NXP2 309 aa11.44□□□□□ -0.58
GPNMB-203ENST00000409458 OR8H1Q8NGG4 311 aa11.44□□□□□ -0.58
GPNMB-203ENST00000409458 TMEM186Q96B77 213 aa11.44□□□□□ -0.58
GPNMB-203ENST00000409458 CLEC7AQ9BXN2 247 aa11.44□□□□□ -0.58
GPNMB-203ENST00000409458 SIRT7Q9NRC8 400 aa11.44□□□□□ -0.58
GPNMB-203ENST00000409458 NSG2Q9Y328 171 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms