RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 IL3RAP26951 378 aa13.65□□□□□ -0.22
SSB-202ENST00000409333 FCN2Q15485 313 aa13.65□□□□□ -0.22
SSB-202ENST00000409333 C2orf68Q2NKX9 166 aa13.65□□□□□ -0.22
SSB-202ENST00000409333 C11orf88Q6PI97 169 aa13.65□□□□□ -0.22
SSB-202ENST00000409333 LHFPL4Q7Z7J7 247 aa13.65□□□□□ -0.22
SSB-202ENST00000409333 ZNF383Q8NA42 475 aa13.65□□□□□ -0.22
SSB-202ENST00000409333 LHFPL5Q8TAF8 219 aa13.65□□□□□ -0.22
SSB-202ENST00000409333 MED28Q9H204 178 aa13.65□□□□□ -0.22
SSB-202ENST00000409333 AMMECR1Q9Y4X0 333 aaPredicted RBP13.65□□□□□ -0.22
SSB-202ENST00000409333 CSPG4Q6UVK1 2322 aa13.65□□□□□ -0.23
SSB-202ENST00000409333 CENPVL3A0A0U1RRI6 287 aa13.64□□□□□ -0.23
SSB-202ENST00000409333 RAMP3O60896 148 aa13.64□□□□□ -0.23
SSB-202ENST00000409333 AVPP01185 164 aa13.64□□□□□ -0.23
SSB-202ENST00000409333 UCP1P25874 307 aa13.64□□□□□ -0.23
SSB-202ENST00000409333 UBE2E1P51965 193 aa13.64□□□□□ -0.23
SSB-202ENST00000409333 FAM71F2Q6NXP2 309 aa13.64□□□□□ -0.23
SSB-202ENST00000409333 DDB2Q92466 427 aa13.64□□□□□ -0.23
SSB-202ENST00000409333 IGHV3OR16-10A0A075B7F0 116 aa13.63□□□□□ -0.23
SSB-202ENST00000409333 TRAV40A0A0B4J280 105 aa13.63□□□□□ -0.23
SSB-202ENST00000409333 DBX1A6NMT0 343 aa13.63□□□□□ -0.23
SSB-202ENST00000409333 LY6LH3BQJ8 138 aa13.63□□□□□ -0.23
SSB-202ENST00000409333 CXCL3P19876 107 aa13.63□□□□□ -0.23
SSB-202ENST00000409333 HTR1DP28221 377 aa13.63□□□□□ -0.23
SSB-202ENST00000409333 ZNF585BQ52M93 769 aa13.63□□□□□ -0.23
SSB-202ENST00000409333 LIAT1Q6ZQX7 453 aa13.63□□□□□ -0.23
SSB-202ENST00000409333 TGIF2LXQ8IUE1 241 aa13.63□□□□□ -0.23
SSB-202ENST00000409333 SPAG16Q8N0X2 631 aa13.63□□□□□ -0.23
SSB-202ENST00000409333 OR11H7Q8NGC8 314 aa13.63□□□□□ -0.23
SSB-202ENST00000409333 COQ8AQ8NI60 647 aa13.63□□□□□ -0.23
SSB-202ENST00000409333 THBS3P49746 956 aa13.63□□□□□ -0.23
SSB-202ENST00000409333 CYB5R2Q6BCY4 276 aa13.63□□□□□ -0.23
SSB-202ENST00000409333 C17orf50Q8WW18 174 aa13.63□□□□□ -0.23
SSB-202ENST00000409333 ACANP16112 2415 aa13.63□□□□□ -0.23
SSB-202ENST00000409333 TLN2Q9Y4G6 2542 aa13.62□□□□□ -0.23
SSB-202ENST00000409333 A0A0B4J2A0 478 aa13.62□□□□□ -0.23
SSB-202ENST00000409333 HMX3A6NHT5 357 aa13.62□□□□□ -0.23
SSB-202ENST00000409333 LEUTXA8MZ59 168 aa13.62□□□□□ -0.23
SSB-202ENST00000409333 CCSO14618 274 aa13.62□□□□□ -0.23
SSB-202ENST00000409333 FCGR3BO75015 233 aa13.62□□□□□ -0.23
SSB-202ENST00000409333 CDS2O95674 445 aa13.62□□□□□ -0.23
SSB-202ENST00000409333 SULT1A3P0DMM9 295 aa13.62□□□□□ -0.23
SSB-202ENST00000409333 SULT1A4P0DMN0 295 aa13.62□□□□□ -0.23
SSB-202ENST00000409333 IGHV4-38-2P0DP08 117 aa13.62□□□□□ -0.23
SSB-202ENST00000409333 PAX6P26367 422 aa13.62□□□□□ -0.23
SSB-202ENST00000409333 ZNF816Q0VGE8 651 aaPredicted RBP13.62□□□□□ -0.23
SSB-202ENST00000409333 TPTE2P1Q5T6R2 138 aa13.62□□□□□ -0.23
SSB-202ENST00000409333 CHAC2Q8WUX2 184 aa13.62□□□□□ -0.23
SSB-202ENST00000409333 RPEQ96AT9 228 aa13.62□□□□□ -0.23
SSB-202ENST00000409333 TMEM56Q96MV1 263 aa13.62□□□□□ -0.23
SSB-202ENST00000409333 NABP2Q9BQ15 211 aa13.62□□□□□ -0.23
SSB-202ENST00000409333 DPM3Q9P2X0 92 aa13.62□□□□□ -0.23
SSB-202ENST00000409333 SHPKQ9UHJ6 478 aa13.62□□□□□ -0.23
SSB-202ENST00000409333 TMEM56-RWDD3S4R434 201 aa13.62□□□□□ -0.23
SSB-202ENST00000409333 OTOGQ6ZRI0 2925 aa13.62□□□□□ -0.23
SSB-202ENST00000409333 GOSR2O14653 212 aa13.61□□□□□ -0.23
SSB-202ENST00000409333 ADAP1O75689 374 aa13.61□□□□□ -0.23
SSB-202ENST00000409333 B3GALNT1O75752 331 aa13.61□□□□□ -0.23
SSB-202ENST00000409333 IGKV1-39P01597 117 aa13.61□□□□□ -0.23
SSB-202ENST00000409333 IGKV1D-39P04432 117 aa13.61□□□□□ -0.23
SSB-202ENST00000409333 SERPINE2P07093 398 aa13.61□□□□□ -0.23
SSB-202ENST00000409333 LGALS4P56470 323 aa13.61□□□□□ -0.23
SSB-202ENST00000409333 TMEM268Q5VZI3 342 aa13.61□□□□□ -0.23
SSB-202ENST00000409333 RUSC1-AS1Q66K80 236 aa13.61□□□□□ -0.23
SSB-202ENST00000409333 SELENOHQ8IZQ5 122 aaKnown RBP13.61□□□□□ -0.23
SSB-202ENST00000409333 LGI3Q8N145 548 aa13.61□□□□□ -0.23
SSB-202ENST00000409333 PIP4P2Q8N4L2 257 aa13.61□□□□□ -0.23
SSB-202ENST00000409333 LRTM2Q8N967 370 aa13.61□□□□□ -0.23
SSB-202ENST00000409333 ADTRPQ96IZ2 230 aa13.61□□□□□ -0.23
SSB-202ENST00000409333 C18orf12Q96KH6 178 aa13.61□□□□□ -0.23
SSB-202ENST00000409333 MGAT4CQ9UBM8 478 aa13.61□□□□□ -0.23
SSB-202ENST00000409333 HILPDAQ9Y5L2 63 aa13.61□□□□□ -0.23
SSB-202ENST00000409333 IGHV1-3A0A0C4DH29 117 aa13.6□□□□□ -0.23
SSB-202ENST00000409333 J3QLI3 93 aa13.6□□□□□ -0.23
SSB-202ENST00000409333 NPFFO15130 113 aa13.6□□□□□ -0.23
SSB-202ENST00000409333 HOXB5P09067 269 aa13.6□□□□□ -0.23
SSB-202ENST00000409333 SAA4P35542 130 aa13.6□□□□□ -0.23
SSB-202ENST00000409333 LPAR6P43657 344 aa13.6□□□□□ -0.23
SSB-202ENST00000409333 BRD3OSQ6XYD6 125 aa13.6□□□□□ -0.23
SSB-202ENST00000409333 LYZL2Q7Z4W2 148 aa13.6□□□□□ -0.23
SSB-202ENST00000409333 ZNF695Q8IW36 515 aa13.6□□□□□ -0.23
SSB-202ENST00000409333 DYNAPQ8N1N2 210 aa13.6□□□□□ -0.23
SSB-202ENST00000409333 SLC35G3Q8N808 338 aa13.6□□□□□ -0.23
SSB-202ENST00000409333 PRELID3BQ9Y3B1 194 aa13.6□□□□□ -0.23
SSB-202ENST00000409333 IGHV1-69DA0A0B4J2H0 117 aa13.6□□□□□ -0.23
SSB-202ENST00000409333 A0A1W2PPI3 338 aa13.6□□□□□ -0.23
SSB-202ENST00000409333 MPTX1A8MV57 137 aa13.6□□□□□ -0.23
SSB-202ENST00000409333 H0YJW9 148 aa13.6□□□□□ -0.23
SSB-202ENST00000409333 S1PR2O95136 353 aa13.6□□□□□ -0.23
SSB-202ENST00000409333 SIX6O95475 246 aa13.6□□□□□ -0.23
SSB-202ENST00000409333 IGHV1-69P01742 117 aa13.6□□□□□ -0.23
SSB-202ENST00000409333 GAPDHP04406 335 aaKnown RBP13.6□□□□□ -0.23
SSB-202ENST00000409333 CEACAM3P40198 252 aa13.6□□□□□ -0.23
SSB-202ENST00000409333 SRPXP78539 464 aa13.6□□□□□ -0.23
SSB-202ENST00000409333 KLF17Q5JT82 389 aaPredicted RBP13.6□□□□□ -0.23
SSB-202ENST00000409333 MINOS1Q5TGZ0 78 aa13.6□□□□□ -0.23
SSB-202ENST00000409333 TCTEX1D1Q8N7M0 179 aa13.6□□□□□ -0.23
SSB-202ENST00000409333 RBPMSQ93062 196 aaKnown RBP13.6□□□□□ -0.23
SSB-202ENST00000409333 AJUBAQ96IF1 538 aa13.6□□□□□ -0.23
SSB-202ENST00000409333 TBL2Q9Y4P3 447 aaKnown RBP13.6□□□□□ -0.23
SSB-202ENST00000409333 MINOS1-NBL1R4GNA1 71 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms