RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 ABCA11PQ4W5N1 156 aa11.34□□□□□ -0.59
CHRNA1-204ENST00000409323 C9orf139Q6ZV77 190 aa11.34□□□□□ -0.59
CHRNA1-204ENST00000409323 TMEM219Q86XT9 240 aa11.34□□□□□ -0.59
CHRNA1-204ENST00000409323 TEX29Q8N6K0 151 aa11.34□□□□□ -0.59
CHRNA1-204ENST00000409323 TCTEX1D2Q8WW35 142 aa11.34□□□□□ -0.59
CHRNA1-204ENST00000409323 CAPSLQ8WWF8 208 aa11.34□□□□□ -0.59
CHRNA1-204ENST00000409323 RTBDNQ9BSG5 229 aaPredicted RBP11.34□□□□□ -0.59
CHRNA1-204ENST00000409323 RSRP1Q9BUV0 290 aa11.34□□□□□ -0.59
CHRNA1-204ENST00000409323 C5orf66Q9H5L9 145 aa11.34□□□□□ -0.59
CHRNA1-204ENST00000409323 CUBNO60494 3623 aa11.34□□□□□ -0.59
CHRNA1-204ENST00000409323 TRAV6A0A075B6T7 132 aa11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 INMT-MINDY4F8WBC2 141 aa11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 H7C2Y5 167 aa11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 HOXA3O43365 443 aaPredicted RBP11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 PFDN1O60925 122 aa11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 PGLYRP1O75594 196 aaPredicted RBP11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 NDUFB6O95139 128 aa11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 IGKV1D-33P01593 117 aa11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 IGKV1-33P01594 117 aa11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 SNRNP70P08621 437 aaKnown RBP11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 TRAPPC2P0DI81 140 aa11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 TRAPPC2BP0DI82 140 aa11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 DUTP33316 252 aaKnown RBP11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 PIGPP57054 158 aa11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 RAB25P57735 213 aa11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 BPIFB3P59826 476 aa11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 EIF4EBP1Q13541 118 aaPredicted RBP11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 HES1Q14469 280 aa11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 KCTD9Q7L273 389 aa11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 SLC38A6Q8IZM9 456 aa11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 BVESQ8NE79 360 aa11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 CFHR4Q92496 578 aa11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 RITA1Q96K30 269 aa11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 SLC2A9Q9NRM0 540 aa11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 GPR132Q9UNW8 380 aa11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 C7orf66A4D0T2 115 aa11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 H0YJW9 148 aa11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 ARPC1BO15143 372 aaKnown RBP11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 AKR1C4P17516 323 aa11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 UCP3P55916 312 aa11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 RBMS2Q15434 407 aaKnown RBP11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 TATDN3Q17R31 274 aa11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 LRRC75BQ2VPJ9 315 aa11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 TBC1D26Q86UD7 250 aa11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 PIFOQ8TCI5 191 aa11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 TAF15Q92804 592 aaKnown RBP eCLIP11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 ALX4Q9H161 411 aaPredicted RBP11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 MEGF9Q9H1U4 602 aa11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 PRR13Q9NZ81 148 aa11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 C14orf166Q9Y224 244 aaKnown RBP11.33□□□□□ -0.6
CHRNA1-204ENST00000409323 FCGR3BO75015 233 aa11.32□□□□□ -0.6
CHRNA1-204ENST00000409323 IGKV1-16P04430 117 aa11.32□□□□□ -0.6
CHRNA1-204ENST00000409323 FAM157CP0CG43 387 aa11.32□□□□□ -0.6
CHRNA1-204ENST00000409323 CNTFRP26992 372 aa11.32□□□□□ -0.6
CHRNA1-204ENST00000409323 SP6Q3SY56 376 aa11.32□□□□□ -0.6
CHRNA1-204ENST00000409323 CCDC144NLQ6NUI1 221 aa11.32□□□□□ -0.6
CHRNA1-204ENST00000409323 Q6YL49 198 aa11.32□□□□□ -0.6
CHRNA1-204ENST00000409323 OR8H3Q8N146 312 aa11.32□□□□□ -0.6
CHRNA1-204ENST00000409323 ZFAND1Q8TCF1 268 aa11.32□□□□□ -0.6
CHRNA1-204ENST00000409323 TMEM230Q96A57 120 aa11.32□□□□□ -0.6
CHRNA1-204ENST00000409323 SLC25A21Q9BQT8 299 aaPredicted RBP11.32□□□□□ -0.6
CHRNA1-204ENST00000409323 ESM1Q9NQ30 184 aa11.32□□□□□ -0.6
CHRNA1-204ENST00000409323 SLC35D1Q9NTN3 355 aa11.32□□□□□ -0.6
CHRNA1-204ENST00000409323 NUDT15Q9NV35 164 aa11.32□□□□□ -0.6
CHRNA1-204ENST00000409323 RAMP3O60896 148 aa11.31□□□□□ -0.6
CHRNA1-204ENST00000409323 VENTXO95231 258 aa11.31□□□□□ -0.6
CHRNA1-204ENST00000409323 CTSDP07339 412 aaPredicted RBP11.31□□□□□ -0.6
CHRNA1-204ENST00000409323 RPA2P15927 270 aa11.31□□□□□ -0.6
CHRNA1-204ENST00000409323 ANXA7P20073 488 aaKnown RBP11.31□□□□□ -0.6
CHRNA1-204ENST00000409323 IER3P46695 156 aa11.31□□□□□ -0.6
CHRNA1-204ENST00000409323 BRWD1-AS2P59051 145 aa11.31□□□□□ -0.6
CHRNA1-204ENST00000409323 FAM71F2Q6NXP2 309 aa11.31□□□□□ -0.6
CHRNA1-204ENST00000409323 LPCAT3Q6P1A2 487 aa11.31□□□□□ -0.6
CHRNA1-204ENST00000409323 CMTM1Q8IZ96 169 aa11.31□□□□□ -0.6
CHRNA1-204ENST00000409323 DDB2Q92466 427 aa11.31□□□□□ -0.6
CHRNA1-204ENST00000409323 AKR1E2Q96JD6 320 aa11.31□□□□□ -0.6
CHRNA1-204ENST00000409323 C20orf85Q9H1P6 137 aa11.31□□□□□ -0.6
CHRNA1-204ENST00000409323 GHITMQ9H3K2 345 aa11.31□□□□□ -0.6
CHRNA1-204ENST00000409323 GAB2Q9UQC2 676 aa11.31□□□□□ -0.6
CHRNA1-204ENST00000409323 DNAJC9-AS1A6NH13 148 aa11.3□□□□□ -0.6
CHRNA1-204ENST00000409323 HMX3A6NHT5 357 aa11.3□□□□□ -0.6
CHRNA1-204ENST00000409323 OOSP1A8MZH6 123 aa11.3□□□□□ -0.6
CHRNA1-204ENST00000409323 MPPED1O15442 326 aa11.3□□□□□ -0.6
CHRNA1-204ENST00000409323 TXNL1O43396 289 aa11.3□□□□□ -0.6
CHRNA1-204ENST00000409323 SLC22A5O76082 557 aa11.3□□□□□ -0.6
CHRNA1-204ENST00000409323 CRYZL1O95825 349 aa11.3□□□□□ -0.6
CHRNA1-204ENST00000409323 DHFRP00374 187 aa11.3□□□□□ -0.6
CHRNA1-204ENST00000409323 IL5P05113 134 aa11.3□□□□□ -0.6
CHRNA1-204ENST00000409323 H2AFB2P0C5Z0 115 aa11.3□□□□□ -0.6
CHRNA1-204ENST00000409323 THBS3P49746 956 aa11.3□□□□□ -0.6
CHRNA1-204ENST00000409323 RBMS3Q6XE24 437 aaKnown RBP11.3□□□□□ -0.6
CHRNA1-204ENST00000409323 OR5AN1Q8NGI8 311 aa11.3□□□□□ -0.6
CHRNA1-204ENST00000409323 TP53RKQ96S44 253 aa11.3□□□□□ -0.6
CHRNA1-204ENST00000409323 HSD17B10Q99714 261 aaKnown RBP11.3□□□□□ -0.6
CHRNA1-204ENST00000409323 TEX13DA0A0J9YY54 714 aaPredicted RBP11.29□□□□□ -0.6
CHRNA1-204ENST00000409323 SH2D7A6NKC9 451 aaPredicted RBP11.29□□□□□ -0.6
CHRNA1-204ENST00000409323 PRAF2O60831 178 aa11.29□□□□□ -0.6
CHRNA1-204ENST00000409323 APOA2P02652 100 aa11.29□□□□□ -0.6
CHRNA1-204ENST00000409323 BRS3P32247 399 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms