RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 ATP5J2P56134 94 aa10.75□□□□□ -0.69
SMARCB1-203ENST00000407082 HTD2P86397 168 aa10.75□□□□□ -0.69
SMARCB1-203ENST00000407082 WDR82Q6UXN9 313 aa10.75□□□□□ -0.69
SMARCB1-203ENST00000407082 BOLLQ8N9W6 283 aaKnown RBP10.75□□□□□ -0.69
SMARCB1-203ENST00000407082 OR2G3Q8NGZ4 309 aa10.75□□□□□ -0.69
SMARCB1-203ENST00000407082 OR51H1Q8NH63 302 aa10.75□□□□□ -0.69
SMARCB1-203ENST00000407082 SCGB1C1Q8TD33 95 aa10.75□□□□□ -0.69
SMARCB1-203ENST00000407082 CD300LFQ8TDQ1 290 aa10.75□□□□□ -0.69
SMARCB1-203ENST00000407082 ATP5SQ99766 215 aa10.75□□□□□ -0.69
SMARCB1-203ENST00000407082 OR1A1Q9P1Q5 309 aa10.75□□□□□ -0.69
SMARCB1-203ENST00000407082 PPP1R3CQ9UQK1 317 aa10.75□□□□□ -0.69
SMARCB1-203ENST00000407082 MMP24Q9Y5R2 645 aa10.75□□□□□ -0.69
SMARCB1-203ENST00000407082 USF3Q68DE3 2245 aa10.74□□□□□ -0.69
SMARCB1-203ENST00000407082 LOC105371267A0A1B0GV96 52 aa10.74□□□□□ -0.69
SMARCB1-203ENST00000407082 IGSF23A1L1A6 192 aa10.74□□□□□ -0.69
SMARCB1-203ENST00000407082 TNFSF12O43508 249 aa10.74□□□□□ -0.69
SMARCB1-203ENST00000407082 SYNGR2O43760 224 aa10.74□□□□□ -0.69
SMARCB1-203ENST00000407082 PTBP3O95758 552 aaKnown RBP10.74□□□□□ -0.69
SMARCB1-203ENST00000407082 IGHV3-13P01766 116 aa10.74□□□□□ -0.69
SMARCB1-203ENST00000407082 OR8U8P0C7N1 319 aa10.74□□□□□ -0.69
SMARCB1-203ENST00000407082 TNFSF4P23510 183 aa10.74□□□□□ -0.69
SMARCB1-203ENST00000407082 LOXP28300 417 aaPredicted RBP10.74□□□□□ -0.69
SMARCB1-203ENST00000407082 KLF3P57682 345 aaPredicted RBP10.74□□□□□ -0.69
SMARCB1-203ENST00000407082 KRTAP1-1Q07627 177 aa10.74□□□□□ -0.69
SMARCB1-203ENST00000407082 ZNF616Q08AN1 781 aa10.74□□□□□ -0.69
SMARCB1-203ENST00000407082 ALKBH6Q3KRA9 238 aa10.74□□□□□ -0.69
SMARCB1-203ENST00000407082 CXorf66Q5JRM2 361 aaPredicted RBP10.74□□□□□ -0.69
SMARCB1-203ENST00000407082 KRBOX4Q5JUW0 171 aa10.74□□□□□ -0.69
SMARCB1-203ENST00000407082 AKR1C8PQ5T2L2 129 aa10.74□□□□□ -0.69
SMARCB1-203ENST00000407082 SLC25A24Q6NUK1 477 aa10.74□□□□□ -0.69
SMARCB1-203ENST00000407082 ADAM5Q6NVV9 412 aa10.74□□□□□ -0.69
SMARCB1-203ENST00000407082 C11orf53Q8IXP5 236 aa10.74□□□□□ -0.69
SMARCB1-203ENST00000407082 PRR18Q8N4B5 295 aa10.74□□□□□ -0.69
SMARCB1-203ENST00000407082 CLRN3Q8NCR9 226 aa10.74□□□□□ -0.69
SMARCB1-203ENST00000407082 OR8U1Q8NH10 309 aa10.74□□□□□ -0.69
SMARCB1-203ENST00000407082 TMEM171Q8WVE6 324 aa10.74□□□□□ -0.69
SMARCB1-203ENST00000407082 SNX22Q96L94 193 aa10.74□□□□□ -0.69
SMARCB1-203ENST00000407082 WFDC1Q9HC57 220 aa10.74□□□□□ -0.69
SMARCB1-203ENST00000407082 ZDHHC8Q9ULC8 765 aa10.74□□□□□ -0.69
SMARCB1-203ENST00000407082 RNF115Q9Y4L5 304 aa10.74□□□□□ -0.69
SMARCB1-203ENST00000407082 VSTM5A8MXK1 200 aa10.73□□□□□ -0.69
SMARCB1-203ENST00000407082 DNASE2O00115 360 aaPredicted RBP10.73□□□□□ -0.69
SMARCB1-203ENST00000407082 MGST3O14880 152 aa10.73□□□□□ -0.69
SMARCB1-203ENST00000407082 PLAUP00749 431 aa10.73□□□□□ -0.69
SMARCB1-203ENST00000407082 HBZP02008 142 aa10.73□□□□□ -0.69
SMARCB1-203ENST00000407082 MUC1P15941 1255 aaPredicted RBP10.73□□□□□ -0.69
SMARCB1-203ENST00000407082 ZNF16P17020 682 aaPredicted RBP10.73□□□□□ -0.69
SMARCB1-203ENST00000407082 GABRA2P47869 451 aa10.73□□□□□ -0.69
SMARCB1-203ENST00000407082 OR3A1P47881 315 aa10.73□□□□□ -0.69
SMARCB1-203ENST00000407082 DYNLT3P51808 116 aa10.73□□□□□ -0.69
SMARCB1-203ENST00000407082 GUK1Q16774 197 aa10.73□□□□□ -0.69
SMARCB1-203ENST00000407082 ATP6V1FQ16864 119 aa10.73□□□□□ -0.69
SMARCB1-203ENST00000407082 DHRS7BQ6IAN0 325 aaPredicted RBP10.73□□□□□ -0.69
SMARCB1-203ENST00000407082 DRAM1Q8N682 238 aa10.73□□□□□ -0.69
SMARCB1-203ENST00000407082 HSD17B11Q8NBQ5 300 aa10.73□□□□□ -0.69
SMARCB1-203ENST00000407082 OR5C1Q8NGR4 320 aa10.73□□□□□ -0.69
SMARCB1-203ENST00000407082 LRRC29Q8WV35 223 aa10.73□□□□□ -0.69
SMARCB1-203ENST00000407082 RBMXL1Q96E39 390 aaKnown RBP10.73□□□□□ -0.69
SMARCB1-203ENST00000407082 CIB3Q96Q77 187 aaPredicted RBP10.73□□□□□ -0.69
SMARCB1-203ENST00000407082 HSD17B10Q99714 261 aaKnown RBP10.73□□□□□ -0.69
SMARCB1-203ENST00000407082 TMEM204Q9BSN7 226 aa10.73□□□□□ -0.69
SMARCB1-203ENST00000407082 PARD6GQ9BYG4 376 aaPredicted RBP10.73□□□□□ -0.69
SMARCB1-203ENST00000407082 PSENENQ9NZ42 101 aa10.73□□□□□ -0.69
SMARCB1-203ENST00000407082 ABCA1O95477 2261 aa10.73□□□□□ -0.69
SMARCB1-203ENST00000407082 ROS1P08922 2347 aa10.73□□□□□ -0.69
SMARCB1-203ENST00000407082 SRRM5B3KS81 715 aa10.72□□□□□ -0.69
SMARCB1-203ENST00000407082 SHISA9B4DS77 424 aa10.72□□□□□ -0.69
SMARCB1-203ENST00000407082 ATP6V1G2-DDX39BF2Z307 99 aa10.72□□□□□ -0.69
SMARCB1-203ENST00000407082 H7C2Y5 167 aa10.72□□□□□ -0.69
SMARCB1-203ENST00000407082 TXNL1O43396 289 aa10.72□□□□□ -0.69
SMARCB1-203ENST00000407082 SFTA3P0C7M3 94 aa10.72□□□□□ -0.69
SMARCB1-203ENST00000407082 EPHA1P21709 976 aa10.72□□□□□ -0.69
SMARCB1-203ENST00000407082 ATP6V0CP27449 155 aa10.72□□□□□ -0.69
SMARCB1-203ENST00000407082 PRDX2P32119 198 aa10.72□□□□□ -0.69
SMARCB1-203ENST00000407082 CD80P33681 288 aa10.72□□□□□ -0.69
SMARCB1-203ENST00000407082 COL10A1Q03692 680 aa10.72□□□□□ -0.69
SMARCB1-203ENST00000407082 CLEC12BQ2HXU8 276 aa10.72□□□□□ -0.69
SMARCB1-203ENST00000407082 TMEM30BQ3MIR4 351 aa10.72□□□□□ -0.69
SMARCB1-203ENST00000407082 OR2Z1Q8NG97 314 aa10.72□□□□□ -0.69
SMARCB1-203ENST00000407082 EIF5A2Q9GZV4 153 aaKnown RBP10.72□□□□□ -0.69
SMARCB1-203ENST00000407082 MS4A7Q9GZW8 240 aaPredicted RBP10.72□□□□□ -0.69
SMARCB1-203ENST00000407082 MAGT1Q9H0U3 335 aa10.72□□□□□ -0.69
SMARCB1-203ENST00000407082 HIPK2Q9H2X6 1198 aa10.72□□□□□ -0.69
SMARCB1-203ENST00000407082 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.72□□□□□ -0.69
SMARCB1-203ENST00000407082 CACNG5Q9UF02 275 aa10.72□□□□□ -0.69
SMARCB1-203ENST00000407082 C12orf77C9JDV5 145 aa10.71□□□□□ -0.69
SMARCB1-203ENST00000407082 K7N7A8 449 aa10.71□□□□□ -0.69
SMARCB1-203ENST00000407082 RAB29O14966 203 aa10.71□□□□□ -0.69
SMARCB1-203ENST00000407082 WIPF1O43516 503 aa10.71□□□□□ -0.69
SMARCB1-203ENST00000407082 KIR2DS2P43631 304 aa10.71□□□□□ -0.69
SMARCB1-203ENST00000407082 SERF2P84101 59 aa10.71□□□□□ -0.69
SMARCB1-203ENST00000407082 AKR1C1Q04828 323 aa10.71□□□□□ -0.69
SMARCB1-203ENST00000407082 CLINT1Q14677 625 aa10.71□□□□□ -0.69
SMARCB1-203ENST00000407082 ZNF672Q499Z4 452 aaPredicted RBP10.71□□□□□ -0.69
SMARCB1-203ENST00000407082 PRAMEF6Q5VXH4 476 aa10.71□□□□□ -0.69
SMARCB1-203ENST00000407082 FAM122CQ6P4D5 195 aa10.71□□□□□ -0.69
SMARCB1-203ENST00000407082 TMEM182Q6ZP80 229 aaPredicted RBP10.71□□□□□ -0.69
SMARCB1-203ENST00000407082 Q6ZR03 302 aa10.71□□□□□ -0.69
SMARCB1-203ENST00000407082 PUSL1Q8N0Z8 303 aaKnown RBP10.71□□□□□ -0.69
SMARCB1-203ENST00000407082 FAM213BQ8TBF2 198 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms