RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 UNQ6494/PRO21346Q6UXR6 183 aa20.39■□□□□ 0.85
DNMT3A-206ENST00000406659 TCF23Q7RTU1 214 aa20.39■□□□□ 0.85
DNMT3A-206ENST00000406659 RBKSQ9H477 322 aa20.39■□□□□ 0.85
DNMT3A-206ENST00000406659 SLC25A10Q9UBX3 287 aaPredicted RBP20.39■□□□□ 0.85
DNMT3A-206ENST00000406659 STRAPQ9Y3F4 350 aaKnown RBP20.39■□□□□ 0.85
DNMT3A-206ENST00000406659 SLC31A2O15432 143 aa20.38■□□□□ 0.85
DNMT3A-206ENST00000406659 FCGR3BO75015 233 aa20.38■□□□□ 0.85
DNMT3A-206ENST00000406659 DFFBO76075 338 aa20.38■□□□□ 0.85
DNMT3A-206ENST00000406659 PLAUP00749 431 aa20.38■□□□□ 0.85
DNMT3A-206ENST00000406659 PRH1P02810 166 aa20.38■□□□□ 0.85
DNMT3A-206ENST00000406659 ID4P47928 161 aa20.38■□□□□ 0.85
DNMT3A-206ENST00000406659 CAMLGP49069 296 aa20.38■□□□□ 0.85
DNMT3A-206ENST00000406659 TMEM30BQ3MIR4 351 aa20.38■□□□□ 0.85
DNMT3A-206ENST00000406659 PRORYQ9H606 182 aa20.38■□□□□ 0.85
DNMT3A-206ENST00000406659 CISD1Q9NZ45 108 aaKnown RBP20.38■□□□□ 0.85
DNMT3A-206ENST00000406659 HSPB7Q9UBY9 170 aa20.38■□□□□ 0.85
DNMT3A-206ENST00000406659 CACFD1Q9UGQ2 172 aa20.38■□□□□ 0.85
DNMT3A-206ENST00000406659 GAB2Q9UQC2 676 aa20.38■□□□□ 0.85
DNMT3A-206ENST00000406659 PRELID3BQ9Y3B1 194 aa20.38■□□□□ 0.85
DNMT3A-206ENST00000406659 TANC2Q9HCD6 1990 aa20.38■□□□□ 0.85
DNMT3A-206ENST00000406659 DSCAML1Q8TD84 2053 aa20.37■□□□□ 0.85
DNMT3A-206ENST00000406659 ATP6V0CP27449 155 aa20.37■□□□□ 0.85
DNMT3A-206ENST00000406659 MIDNQ504T8 468 aa20.37■□□□□ 0.85
DNMT3A-206ENST00000406659 CT45A1Q5HYN5 189 aa20.37■□□□□ 0.85
DNMT3A-206ENST00000406659 CT45A3Q8NHU0 189 aa20.37■□□□□ 0.85
DNMT3A-206ENST00000406659 CA5BP1Q8WTZ4 195 aa20.37■□□□□ 0.85
DNMT3A-206ENST00000406659 R3HDM4Q96D70 268 aa20.37■□□□□ 0.85
DNMT3A-206ENST00000406659 LINC00574Q9H8X3 128 aa20.37■□□□□ 0.85
DNMT3A-206ENST00000406659 ROS1P08922 2347 aa20.37■□□□□ 0.85
DNMT3A-206ENST00000406659 TMEM182Q6ZP80 229 aaPredicted RBP20.36■□□□□ 0.85
DNMT3A-206ENST00000406659 OR2G3Q8NGZ4 309 aa20.36■□□□□ 0.85
DNMT3A-206ENST00000406659 GNPNAT1Q96EK6 184 aaPredicted RBP20.36■□□□□ 0.85
DNMT3A-206ENST00000406659 TREM1Q9NP99 234 aa20.36■□□□□ 0.85
DNMT3A-206ENST00000406659 LINC00312Q9Y6C7 94 aa20.36■□□□□ 0.85
DNMT3A-206ENST00000406659 A0A1W2PPE3 182 aa20.36■□□□□ 0.85
DNMT3A-206ENST00000406659 HPRT1P00492 218 aa20.36■□□□□ 0.85
DNMT3A-206ENST00000406659 APOC3P02656 99 aa20.36■□□□□ 0.85
DNMT3A-206ENST00000406659 KIR2DS2P43631 304 aa20.36■□□□□ 0.85
DNMT3A-206ENST00000406659 AKR1C1Q04828 323 aa20.36■□□□□ 0.85
DNMT3A-206ENST00000406659 MEF2CQ06413 473 aaPredicted RBP20.36■□□□□ 0.85
DNMT3A-206ENST00000406659 LY6DQ14210 128 aa20.36■□□□□ 0.85
DNMT3A-206ENST00000406659 ZNF436-AS1Q8NC38 126 aaPredicted RBP20.36■□□□□ 0.85
DNMT3A-206ENST00000406659 DIDO1Q9BTC0 2240 aaKnown RBP20.35■□□□□ 0.85
DNMT3A-206ENST00000406659 TMEM218A2RU14 115 aa20.35■□□□□ 0.85
DNMT3A-206ENST00000406659 MARCH11A6NNE9 402 aa20.35■□□□□ 0.85
DNMT3A-206ENST00000406659 RBMXL2O75526 392 aaKnown RBP20.35■□□□□ 0.85
DNMT3A-206ENST00000406659 IFNA5P01569 189 aa20.35■□□□□ 0.85
DNMT3A-206ENST00000406659 METTL15P1P0C7V9 234 aa20.35■□□□□ 0.85
DNMT3A-206ENST00000406659 SPANXN5Q5MJ07 72 aa20.35■□□□□ 0.85
DNMT3A-206ENST00000406659 UTF1Q5T230 341 aa20.35■□□□□ 0.85
DNMT3A-206ENST00000406659 S1PR3Q99500 378 aa20.35■□□□□ 0.85
DNMT3A-206ENST00000406659 TRIM77I1YAP6 450 aa20.34■□□□□ 0.85
DNMT3A-206ENST00000406659 RBFOX2O43251 390 aaKnown RBP eCLIP20.34■□□□□ 0.85
DNMT3A-206ENST00000406659 TSPAN15O95858 294 aa20.34■□□□□ 0.85
DNMT3A-206ENST00000406659 ZNF616Q08AN1 781 aa20.34■□□□□ 0.85
DNMT3A-206ENST00000406659 PRAMEF5Q5TYX0 476 aa20.34■□□□□ 0.85
DNMT3A-206ENST00000406659 TSNAXQ99598 290 aaKnown RBP20.34■□□□□ 0.85
DNMT3A-206ENST00000406659 C19orf12Q9NSK7 152 aa20.34■□□□□ 0.85
DNMT3A-206ENST00000406659 RPL31P62899 125 aaKnown RBP20.34■□□□□ 0.85
DNMT3A-206ENST00000406659 HBG1P69891 147 aa20.34■□□□□ 0.85
DNMT3A-206ENST00000406659 HBG2P69892 147 aa20.34■□□□□ 0.85
DNMT3A-206ENST00000406659 SRSF3P84103 164 aaKnown RBP20.34■□□□□ 0.85
DNMT3A-206ENST00000406659 SLC25A24Q6NUK1 477 aa20.34■□□□□ 0.85
DNMT3A-206ENST00000406659 LYPD6BQ8NI32 183 aa20.34■□□□□ 0.85
DNMT3A-206ENST00000406659 GAL3ST2Q9H3Q3 398 aa20.34■□□□□ 0.85
DNMT3A-206ENST00000406659 RPUSD1Q9UJJ7 312 aaKnown RBP20.34■□□□□ 0.85
DNMT3A-206ENST00000406659 IGHV1-69-2A0A0G2JMI3 117 aa20.33■□□□□ 0.84
DNMT3A-206ENST00000406659 AGPAT2O15120 278 aa20.33■□□□□ 0.84
DNMT3A-206ENST00000406659 NDUFB3O43676 98 aa20.33■□□□□ 0.84
DNMT3A-206ENST00000406659 GNG10P50151 68 aa20.33■□□□□ 0.84
DNMT3A-206ENST00000406659 MRPS11P82912 194 aaKnown RBP20.33■□□□□ 0.84
DNMT3A-206ENST00000406659 CDSNQ15517 529 aa20.33■□□□□ 0.84
DNMT3A-206ENST00000406659 ZNF439Q8NDP4 499 aa20.33■□□□□ 0.84
DNMT3A-206ENST00000406659 UMAD1C9J7I0 102 aa20.32■□□□□ 0.84
DNMT3A-206ENST00000406659 TNFRSF13BO14836 293 aaPredicted RBP20.32■□□□□ 0.84
DNMT3A-206ENST00000406659 C1QL1O75973 258 aa20.32■□□□□ 0.84
DNMT3A-206ENST00000406659 FHITP49789 147 aa20.32■□□□□ 0.84
DNMT3A-206ENST00000406659 ERVK-16P61578 105 aa20.32■□□□□ 0.84
DNMT3A-206ENST00000406659 LRRC10Q5BKY1 277 aa20.32■□□□□ 0.84
DNMT3A-206ENST00000406659 LYG1Q8N1E2 194 aa20.32■□□□□ 0.84
DNMT3A-206ENST00000406659 FAM213BQ8TBF2 198 aa20.32■□□□□ 0.84
DNMT3A-206ENST00000406659 TMEM231Q9H6L2 316 aa20.32■□□□□ 0.84
DNMT3A-206ENST00000406659 RFNGQ9Y644 331 aa20.32■□□□□ 0.84
DNMT3A-206ENST00000406659 SAA2-SAA4A0A096LPE2 208 aa20.31■□□□□ 0.84
DNMT3A-206ENST00000406659 SIAH2O43255 324 aa20.31■□□□□ 0.84
DNMT3A-206ENST00000406659 MMP23AO75900 390 aa20.31■□□□□ 0.84
DNMT3A-206ENST00000406659 SAA2P0DJI9 122 aaPredicted RBP20.31■□□□□ 0.84
DNMT3A-206ENST00000406659 DEFA5Q01523 94 aa20.31■□□□□ 0.84
DNMT3A-206ENST00000406659 LYPD2Q6UXB3 125 aa20.31■□□□□ 0.84
DNMT3A-206ENST00000406659 MUC15Q8N387 334 aa20.31■□□□□ 0.84
DNMT3A-206ENST00000406659 OR10A7Q8NGE5 316 aa20.31■□□□□ 0.84
DNMT3A-206ENST00000406659 H1FXQ92522 213 aaKnown RBP20.31■□□□□ 0.84
DNMT3A-206ENST00000406659 THBS3P49746 956 aa20.31■□□□□ 0.84
DNMT3A-206ENST00000406659 ARL16Q0P5N6 197 aa20.31■□□□□ 0.84
DNMT3A-206ENST00000406659 ZNF273Q14593 569 aa20.31■□□□□ 0.84
DNMT3A-206ENST00000406659 ZNF672Q499Z4 452 aaPredicted RBP20.31■□□□□ 0.84
DNMT3A-206ENST00000406659 C1orf229Q6ZS94 237 aaPredicted RBP20.31■□□□□ 0.84
DNMT3A-206ENST00000406659 LILRB2Q8N423 598 aa20.31■□□□□ 0.84
DNMT3A-206ENST00000406659 COMMD1Q8N668 190 aa20.31■□□□□ 0.84
DNMT3A-206ENST00000406659 SCGB1C1Q8TD33 95 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms