RNA–Protein interactions for RNA: ENST00000404284.6

TOM1-203, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-203ENST00000404284 FAM90A26D6RGX4 464 aa13.17□□□□□ -0.3
TOM1-203ENST00000404284 CDX4O14627 284 aaPredicted RBP13.17□□□□□ -0.3
TOM1-203ENST00000404284 PSG7Q13046 419 aa13.17□□□□□ -0.3
TOM1-203ENST00000404284 MRPL49Q13405 166 aaKnown RBP13.17□□□□□ -0.3
TOM1-203ENST00000404284 ZNF705AQ6ZN79 300 aaPredicted RBP13.17□□□□□ -0.3
TOM1-203ENST00000404284 OR1L1Q8NH94 360 aa13.17□□□□□ -0.3
TOM1-203ENST00000404284 C1QTNF9BB2RNN3 333 aa13.17□□□□□ -0.3
TOM1-203ENST00000404284 B4DEV8 164 aa13.17□□□□□ -0.3
TOM1-203ENST00000404284 RAMP3O60896 148 aa13.17□□□□□ -0.3
TOM1-203ENST00000404284 TNFSF15O95150 251 aa13.17□□□□□ -0.3
TOM1-203ENST00000404284 GRPP07492 148 aa13.17□□□□□ -0.3
TOM1-203ENST00000404284 P0C879 139 aa13.17□□□□□ -0.3
TOM1-203ENST00000404284 GABRA6Q16445 453 aa13.17□□□□□ -0.3
TOM1-203ENST00000404284 TMEM41BQ5BJD5 291 aa13.17□□□□□ -0.3
TOM1-203ENST00000404284 FAM53AQ6NSI3 398 aaPredicted RBP13.17□□□□□ -0.3
TOM1-203ENST00000404284 DHRS13Q6UX07 377 aa13.17□□□□□ -0.3
TOM1-203ENST00000404284 TMEM14EPQ6UXP3 125 aa13.17□□□□□ -0.3
TOM1-203ENST00000404284 ZNF645Q8N7E2 425 aa13.17□□□□□ -0.3
TOM1-203ENST00000404284 GMPPAQ96IJ6 420 aaPredicted RBP13.17□□□□□ -0.3
TOM1-203ENST00000404284 UBE2L5PA0A1B0GUS4 154 aa13.16□□□□□ -0.3
TOM1-203ENST00000404284 RNF212BA8MTL3 300 aa13.16□□□□□ -0.3
TOM1-203ENST00000404284 SLC38A11Q08AI6 406 aa13.16□□□□□ -0.3
TOM1-203ENST00000404284 EIF4EBP1Q13541 118 aaPredicted RBP13.16□□□□□ -0.3
TOM1-203ENST00000404284 OR1P1Q8NH06 330 aa13.16□□□□□ -0.3
TOM1-203ENST00000404284 TAF15Q92804 592 aaKnown RBP eCLIP13.16□□□□□ -0.3
TOM1-203ENST00000404284 C12orf77C9JDV5 145 aa13.16□□□□□ -0.3
TOM1-203ENST00000404284 LYZL6O75951 148 aa13.16□□□□□ -0.3
TOM1-203ENST00000404284 MPV17P39210 176 aa13.16□□□□□ -0.3
TOM1-203ENST00000404284 UBE2NP61088 152 aaKnown RBP13.16□□□□□ -0.3
TOM1-203ENST00000404284 RPL30P62888 115 aaKnown RBP13.16□□□□□ -0.3
TOM1-203ENST00000404284 HOXA4Q00056 320 aaPredicted RBP13.16□□□□□ -0.3
TOM1-203ENST00000404284 OR4X1Q8NH49 305 aa13.16□□□□□ -0.3
TOM1-203ENST00000404284 OR2D2Q9H210 308 aa13.16□□□□□ -0.3
TOM1-203ENST00000404284 RBKSQ9H477 322 aa13.16□□□□□ -0.3
TOM1-203ENST00000404284 HSPB7Q9UBY9 170 aa13.16□□□□□ -0.3
TOM1-203ENST00000404284 DIDO1Q9BTC0 2240 aaKnown RBP13.15□□□□□ -0.3
TOM1-203ENST00000404284 TMEM30CPA0ZSE6 113 aa13.15□□□□□ -0.3
TOM1-203ENST00000404284 MAP1LC3B2A6NCE7 125 aa13.15□□□□□ -0.3
TOM1-203ENST00000404284 TMEM210A6NLX4 147 aa13.15□□□□□ -0.3
TOM1-203ENST00000404284 SIAH2O43255 324 aa13.15□□□□□ -0.3
TOM1-203ENST00000404284 IGKV1D-33P01593 117 aa13.15□□□□□ -0.3
TOM1-203ENST00000404284 IGKV1-33P01594 117 aa13.15□□□□□ -0.3
TOM1-203ENST00000404284 ELLP55199 621 aaPredicted RBP13.15□□□□□ -0.3
TOM1-203ENST00000404284 PNRC1Q12796 327 aaPredicted RBP13.15□□□□□ -0.3
TOM1-203ENST00000404284 BATFQ16520 125 aa13.15□□□□□ -0.3
TOM1-203ENST00000404284 MAP1LC3BQ9GZQ8 125 aa13.15□□□□□ -0.3
TOM1-203ENST00000404284 LPAR2Q9HBW0 351 aa13.15□□□□□ -0.3
TOM1-203ENST00000404284 NCOR1O75376 2440 aa13.15□□□□□ -0.3
TOM1-203ENST00000404284 WNT9BO14905 357 aa13.15□□□□□ -0.3
TOM1-203ENST00000404284 MLNRO43193 412 aa13.15□□□□□ -0.3
TOM1-203ENST00000404284 SP9P0CG40 484 aa13.15□□□□□ -0.3
TOM1-203ENST00000404284 IRF2P14316 349 aa13.15□□□□□ -0.3
TOM1-203ENST00000404284 ARG2P78540 354 aa13.15□□□□□ -0.3
TOM1-203ENST00000404284 PMP22Q01453 160 aa13.15□□□□□ -0.3
TOM1-203ENST00000404284 PLA2G2CQ5R387 149 aa13.15□□□□□ -0.3
TOM1-203ENST00000404284 GCNT2Q8N0V5 402 aa13.15□□□□□ -0.3
TOM1-203ENST00000404284 PINX1Q96BK5 328 aaKnown RBP13.15□□□□□ -0.3
TOM1-203ENST00000404284 P2RX4Q99571 388 aa13.15□□□□□ -0.3
TOM1-203ENST00000404284 XKRY2A2RUG3 117 aa13.14□□□□□ -0.31
TOM1-203ENST00000404284 CLDN1O95832 211 aa13.14□□□□□ -0.31
TOM1-203ENST00000404284 G6PCP35575 357 aa13.14□□□□□ -0.31
TOM1-203ENST00000404284 RND2P52198 227 aa13.14□□□□□ -0.31
TOM1-203ENST00000404284 RBX1P62877 108 aa13.14□□□□□ -0.31
TOM1-203ENST00000404284 TGFBR3Q03167 851 aa13.14□□□□□ -0.31
TOM1-203ENST00000404284 HES3Q5TGS1 186 aa13.14□□□□□ -0.31
TOM1-203ENST00000404284 OR8G2PQ6IF36 304 aa13.14□□□□□ -0.31
TOM1-203ENST00000404284 ZNF826PQ6ZT77 177 aa13.14□□□□□ -0.31
TOM1-203ENST00000404284 TMPRSS7Q7RTY8 843 aa13.14□□□□□ -0.31
TOM1-203ENST00000404284 MRGPRGQ86SM5 289 aa13.14□□□□□ -0.31
TOM1-203ENST00000404284 C11orf53Q8IXP5 236 aa13.14□□□□□ -0.31
TOM1-203ENST00000404284 ZBTB34Q8NCN2 500 aa13.14□□□□□ -0.31
TOM1-203ENST00000404284 KLF14Q8TD94 323 aaPredicted RBP13.14□□□□□ -0.31
TOM1-203ENST00000404284 RNASE8Q8TDE3 154 aaKnown RBP13.14□□□□□ -0.31
TOM1-203ENST00000404284 GALMQ96C23 342 aa13.14□□□□□ -0.31
TOM1-203ENST00000404284 SDF2L1Q9HCN8 221 aa13.14□□□□□ -0.31
TOM1-203ENST00000404284 KCNIP1Q9NZI2 227 aa13.14□□□□□ -0.31
TOM1-203ENST00000404284 CLCF1Q9UBD9 225 aa13.14□□□□□ -0.31
TOM1-203ENST00000404284 VAX2Q9UIW0 290 aa13.14□□□□□ -0.31
TOM1-203ENST00000404284 M0QZK8 103 aa13.14□□□□□ -0.31
TOM1-203ENST00000404284 GGCTO75223 188 aaKnown RBP13.14□□□□□ -0.31
TOM1-203ENST00000404284 CYB5R3P00387 301 aaPredicted RBP13.14□□□□□ -0.31
TOM1-203ENST00000404284 PLA2G5P39877 138 aa13.14□□□□□ -0.31
TOM1-203ENST00000404284 BRWD1-AS2P59051 145 aa13.14□□□□□ -0.31
TOM1-203ENST00000404284 COL10A1Q03692 680 aa13.14□□□□□ -0.31
TOM1-203ENST00000404284 OR5I1Q13606 314 aa13.14□□□□□ -0.31
TOM1-203ENST00000404284 CXorf67Q86X51 503 aaPredicted RBP13.14□□□□□ -0.31
TOM1-203ENST00000404284 MRPL41Q8IXM3 137 aaKnown RBP13.14□□□□□ -0.31
TOM1-203ENST00000404284 RPP25LQ8N5L8 163 aaKnown RBP13.14□□□□□ -0.31
TOM1-203ENST00000404284 OR52L2PQ8NGH6 319 aa13.14□□□□□ -0.31
TOM1-203ENST00000404284 TMEM242Q9NWH2 141 aa13.14□□□□□ -0.31
TOM1-203ENST00000404284 USF3Q68DE3 2245 aa13.14□□□□□ -0.31
TOM1-203ENST00000404284 IFNL4K9M1U5 179 aa13.13□□□□□ -0.31
TOM1-203ENST00000404284 SCGB1D1O95968 90 aa13.13□□□□□ -0.31
TOM1-203ENST00000404284 KRASP01116 189 aa13.13□□□□□ -0.31
TOM1-203ENST00000404284 ZNF816Q0VGE8 651 aaPredicted RBP13.13□□□□□ -0.31
TOM1-203ENST00000404284 Q6ZR03 302 aa13.13□□□□□ -0.31
TOM1-203ENST00000404284 CENPVQ7Z7K6 275 aaPredicted RBP13.13□□□□□ -0.31
TOM1-203ENST00000404284 ZNF808Q8N4W9 903 aaPredicted RBP13.13□□□□□ -0.31
TOM1-203ENST00000404284 COQ2Q96H96 371 aa13.13□□□□□ -0.31
TOM1-203ENST00000404284 TIMM9Q9Y5J7 89 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms