RNA–Protein interactions for RNA: ENST00000400186.7

CSMD1-202, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-202ENST00000400186 GGTLC2Q14390 218 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 ALX4Q9H161 411 aaPredicted RBP8.34□□□□□ -1.07
CSMD1-202ENST00000400186 RBKSQ9H477 322 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 A0A1W2PPE3 182 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 CISD3P0C7P0 127 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 NUBP1P53384 320 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 OR10AG1Q8NH19 301 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 ST6GALNAC2Q9UJ37 374 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 R4GN57 208 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 TMEM56-RWDD3S4R434 201 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 C10orf126Q8N4M7 172 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 PLAC1Q9HBJ0 212 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 COL24A1Q17RW2 1714 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 NCOA6Q14686 2063 aaPredicted RBP8.34□□□□□ -1.07
CSMD1-202ENST00000400186 KLRB1Q12918 225 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 MDP1Q86V88 176 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 LINC00869P0C866 280 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 LIFP15018 202 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 EBLN2Q6P2I7 272 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 TMEM91Q6ZNR0 172 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 PQLC2Q6ZP29 291 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 PARLQ9H300 379 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 FAM60AQ9NP50 221 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 CBLN4Q9NTU7 201 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 FCARP24071 287 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 GFRA1P56159 465 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 SELENOTP62341 195 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 SPOCK3Q9BQ16 436 aa8.34□□□□□ -1.07
CSMD1-202ENST00000400186 NPIPB6E9PJ23 425 aa8.34□□□□□ -1.08
CSMD1-202ENST00000400186 EIF3GO75821 320 aaKnown RBP eCLIP8.34□□□□□ -1.08
CSMD1-202ENST00000400186 DLX6P56179 175 aa8.34□□□□□ -1.08
CSMD1-202ENST00000400186 WDR25Q64LD2 544 aaPredicted RBP8.34□□□□□ -1.08
CSMD1-202ENST00000400186 ZNF71Q9NQZ8 489 aaPredicted RBP8.34□□□□□ -1.08
CSMD1-202ENST00000400186 A0A1B0GV90 55 aa8.33□□□□□ -1.08
CSMD1-202ENST00000400186 SRIP30626 198 aa8.33□□□□□ -1.08
CSMD1-202ENST00000400186 MRPL16Q9NX20 251 aaKnown RBP8.33□□□□□ -1.08
CSMD1-202ENST00000400186 ZNF660Q6AZW8 331 aaPredicted RBP8.33□□□□□ -1.08
CSMD1-202ENST00000400186 QTRT1Q9BXR0 403 aaKnown RBP8.33□□□□□ -1.08
CSMD1-202ENST00000400186 SIGLEC5O15389 551 aa8.33□□□□□ -1.08
CSMD1-202ENST00000400186 FSTP19883 344 aa8.33□□□□□ -1.08
CSMD1-202ENST00000400186 EPHA8P29322 1005 aaPredicted RBP8.33□□□□□ -1.08
CSMD1-202ENST00000400186 SIGLEC14Q08ET2 396 aa8.33□□□□□ -1.08
CSMD1-202ENST00000400186 SRSF5Q13243 272 aaKnown RBP8.33□□□□□ -1.08
CSMD1-202ENST00000400186 C3AR1Q16581 482 aa8.33□□□□□ -1.08
CSMD1-202ENST00000400186 PSG6Q00889 435 aa8.33□□□□□ -1.08
CSMD1-202ENST00000400186 MTURNQ8N3F0 131 aa8.33□□□□□ -1.08
CSMD1-202ENST00000400186 PTPMT1Q8WUK0 201 aaPredicted RBP8.33□□□□□ -1.08
CSMD1-202ENST00000400186 ERVH48-1M5A8F1 160 aa8.33□□□□□ -1.08
CSMD1-202ENST00000400186 DLL1O00548 723 aa8.33□□□□□ -1.08
CSMD1-202ENST00000400186 OR2A4O95047 310 aa8.33□□□□□ -1.08
CSMD1-202ENST00000400186 NANOS3P60323 173 aaKnown RBP8.33□□□□□ -1.08
CSMD1-202ENST00000400186 OR2A7Q96R45 310 aa8.33□□□□□ -1.08
CSMD1-202ENST00000400186 NPVFQ9HCQ7 196 aa8.33□□□□□ -1.08
CSMD1-202ENST00000400186 A0A1B0GV72 72 aa8.33□□□□□ -1.08
CSMD1-202ENST00000400186 TSPAN2O60636 221 aa8.33□□□□□ -1.08
CSMD1-202ENST00000400186 GAB4Q2WGN9 574 aa8.33□□□□□ -1.08
CSMD1-202ENST00000400186 MAFAQ8NHW3 353 aaPredicted RBP8.33□□□□□ -1.08
CSMD1-202ENST00000400186 PLA2G2FQ9BZM2 168 aa8.33□□□□□ -1.08
CSMD1-202ENST00000400186 BEX4Q9NWD9 120 aaPredicted RBP8.33□□□□□ -1.08
CSMD1-202ENST00000400186 WIPI2Q9Y4P8 454 aa8.33□□□□□ -1.08
CSMD1-202ENST00000400186 TRBV9A0A0B4J1U6 114 aa8.33□□□□□ -1.08
CSMD1-202ENST00000400186 CLDN14O95500 239 aa8.33□□□□□ -1.08
CSMD1-202ENST00000400186 ZPLD1Q8TCW7 415 aa8.33□□□□□ -1.08
CSMD1-202ENST00000400186 EAF1Q96JC9 268 aaPredicted RBP8.33□□□□□ -1.08
CSMD1-202ENST00000400186 KLHDC2Q9Y2U9 406 aa8.33□□□□□ -1.08
CSMD1-202ENST00000400186 PLAUP00749 431 aa8.33□□□□□ -1.08
CSMD1-202ENST00000400186 SNRPCP09234 159 aaKnown RBP8.33□□□□□ -1.08
CSMD1-202ENST00000400186 CCL3P10147 92 aa8.33□□□□□ -1.08
CSMD1-202ENST00000400186 RNFT1Q5M7Z0 435 aa8.33□□□□□ -1.08
CSMD1-202ENST00000400186 OR10S1Q8NGN2 331 aa8.33□□□□□ -1.08
CSMD1-202ENST00000400186 PCP4P48539 62 aa8.32□□□□□ -1.08
CSMD1-202ENST00000400186 INO80CQ6PI98 192 aaPredicted RBP8.32□□□□□ -1.08
CSMD1-202ENST00000400186 PUSL1Q8N0Z8 303 aaKnown RBP8.32□□□□□ -1.08
CSMD1-202ENST00000400186 ZNF645Q8N7E2 425 aa8.32□□□□□ -1.08
CSMD1-202ENST00000400186 CISD1Q9NZ45 108 aaKnown RBP8.32□□□□□ -1.08
CSMD1-202ENST00000400186 KCNE5Q9UJ90 142 aa8.32□□□□□ -1.08
CSMD1-202ENST00000400186 RPS20P60866 119 aaKnown RBP8.32□□□□□ -1.08
CSMD1-202ENST00000400186 MIC13Q5XKP0 118 aa8.32□□□□□ -1.08
CSMD1-202ENST00000400186 FBXW9Q5XUX1 488 aa8.32□□□□□ -1.08
CSMD1-202ENST00000400186 ATOH7Q8N100 152 aa8.32□□□□□ -1.08
CSMD1-202ENST00000400186 NRTNQ99748 197 aa8.32□□□□□ -1.08
CSMD1-202ENST00000400186 WNT5BQ9H1J7 359 aa8.32□□□□□ -1.08
CSMD1-202ENST00000400186 RPL8P62917 257 aaKnown RBP8.32□□□□□ -1.08
CSMD1-202ENST00000400186 ZNF714Q96N38 554 aa8.32□□□□□ -1.08
CSMD1-202ENST00000400186 ZNF430Q9H8G1 570 aaPredicted RBP8.32□□□□□ -1.08
CSMD1-202ENST00000400186 METTL1Q9UBP6 276 aaKnown RBP8.32□□□□□ -1.08
CSMD1-202ENST00000400186 TRBV5-3A0A0A0MS03 114 aa8.32□□□□□ -1.08
CSMD1-202ENST00000400186 C8orf82Q6P1X6 216 aaPredicted RBP8.32□□□□□ -1.08
CSMD1-202ENST00000400186 DMRT1Q9Y5R6 373 aa8.32□□□□□ -1.08
CSMD1-202ENST00000400186 GCSAMLQ5JQS6 135 aa8.32□□□□□ -1.08
CSMD1-202ENST00000400186 RLFQ13129 1914 aa8.32□□□□□ -1.08
CSMD1-202ENST00000400186 CGB1A6NKQ9 187 aa8.32□□□□□ -1.08
CSMD1-202ENST00000400186 C9orf40Q8IXQ3 194 aa8.32□□□□□ -1.08
CSMD1-202ENST00000400186 PMCHL2Q9BQD1 86 aa8.32□□□□□ -1.08
CSMD1-202ENST00000400186 H0YL77 283 aa8.32□□□□□ -1.08
CSMD1-202ENST00000400186 AGAP20933 346 aa8.32□□□□□ -1.08
CSMD1-202ENST00000400186 ZNF441Q8N8Z8 693 aa8.32□□□□□ -1.08
CSMD1-202ENST00000400186 RARRES2Q99969 163 aa8.32□□□□□ -1.08
CSMD1-202ENST00000400186 TMEM70Q9BUB7 260 aa8.32□□□□□ -1.08
CSMD1-202ENST00000400186 TICRRQ7Z2Z1 1910 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms