RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 PRSS53Q2L4Q9 553 aa11.83□□□□□ -0.51
VAPA-202ENST00000400000 LSMEM1Q8N8F7 131 aa11.83□□□□□ -0.51
VAPA-202ENST00000400000 MRAP2Q96G30 205 aa11.83□□□□□ -0.51
VAPA-202ENST00000400000 IDI2-AS1Q9NZ38 188 aa11.83□□□□□ -0.51
VAPA-202ENST00000400000 PRR33A8MZF0 331 aa11.83□□□□□ -0.52
VAPA-202ENST00000400000 HPRT1P00492 218 aa11.83□□□□□ -0.52
VAPA-202ENST00000400000 HINT1P49773 126 aaPredicted RBP11.83□□□□□ -0.52
VAPA-202ENST00000400000 OR4C13Q8NGP0 309 aa11.83□□□□□ -0.52
VAPA-202ENST00000400000 SLC25A33Q9BSK2 321 aa11.83□□□□□ -0.52
VAPA-202ENST00000400000 ARHGEF17Q96PE2 2063 aaPredicted RBP11.83□□□□□ -0.52
VAPA-202ENST00000400000 MYOFQ9NZM1 2061 aa11.83□□□□□ -0.52
VAPA-202ENST00000400000 PGA4P0DJD7 388 aa11.83□□□□□ -0.52
VAPA-202ENST00000400000 NSUN5P1Q3KNT7 163 aa11.83□□□□□ -0.52
VAPA-202ENST00000400000 LYRM7Q5U5X0 104 aa11.83□□□□□ -0.52
VAPA-202ENST00000400000 RARRES2Q99969 163 aa11.83□□□□□ -0.52
VAPA-202ENST00000400000 WDR54Q9H977 334 aa11.83□□□□□ -0.52
VAPA-202ENST00000400000 C7orf77A4D0Y5 90 aa11.83□□□□□ -0.52
VAPA-202ENST00000400000 TCF21O43680 179 aa11.83□□□□□ -0.52
VAPA-202ENST00000400000 CD24P25063 80 aa11.83□□□□□ -0.52
VAPA-202ENST00000400000 PDLIM4P50479 330 aa11.83□□□□□ -0.52
VAPA-202ENST00000400000 SPTBP11277 2137 aa11.83□□□□□ -0.52
VAPA-202ENST00000400000 IGHV1-69-2A0A0G2JMI3 117 aa11.83□□□□□ -0.52
VAPA-202ENST00000400000 KLRB1Q12918 225 aa11.83□□□□□ -0.52
VAPA-202ENST00000400000 SGMS2Q8NHU3 365 aa11.83□□□□□ -0.52
VAPA-202ENST00000400000 KLF14Q8TD94 323 aaPredicted RBP11.83□□□□□ -0.52
VAPA-202ENST00000400000 SRSF12Q8WXF0 261 aaKnown RBP11.83□□□□□ -0.52
VAPA-202ENST00000400000 CKAP5Q14008 2032 aa11.83□□□□□ -0.52
VAPA-202ENST00000400000 LEUTXA8MZ59 168 aa11.83□□□□□ -0.52
VAPA-202ENST00000400000 IGHV3-11P01762 117 aa11.83□□□□□ -0.52
VAPA-202ENST00000400000 ZG16O60844 167 aa11.82□□□□□ -0.52
VAPA-202ENST00000400000 TFF1P04155 84 aa11.82□□□□□ -0.52
VAPA-202ENST00000400000 LHX2P50458 406 aa11.82□□□□□ -0.52
VAPA-202ENST00000400000 RPL8P62917 257 aaKnown RBP11.82□□□□□ -0.52
VAPA-202ENST00000400000 SAP25Q8TEE9 199 aa11.82□□□□□ -0.52
VAPA-202ENST00000400000 GPR82Q96P67 336 aa11.82□□□□□ -0.52
VAPA-202ENST00000400000 SH3BGRL3Q9H299 93 aa11.82□□□□□ -0.52
VAPA-202ENST00000400000 RPL39P5Q59GN2 51 aa11.82□□□□□ -0.52
VAPA-202ENST00000400000 C1orf53Q5VUE5 145 aa11.82□□□□□ -0.52
VAPA-202ENST00000400000 A0A0U1RQV5 110 aa11.82□□□□□ -0.52
VAPA-202ENST00000400000 EGR1P18146 543 aa11.82□□□□□ -0.52
VAPA-202ENST00000400000 IBA57Q5T440 356 aaKnown RBP11.82□□□□□ -0.52
VAPA-202ENST00000400000 LAMTOR1Q6IAA8 161 aa11.82□□□□□ -0.52
VAPA-202ENST00000400000 CD300LDQ6UXZ3 194 aa11.82□□□□□ -0.52
VAPA-202ENST00000400000 TMEM91Q6ZNR0 172 aa11.82□□□□□ -0.52
VAPA-202ENST00000400000 SIGLEC12Q96PQ1 595 aa11.82□□□□□ -0.52
VAPA-202ENST00000400000 S1PR2O95136 353 aa11.82□□□□□ -0.52
VAPA-202ENST00000400000 ARL14EPLP0DKL9 152 aa11.82□□□□□ -0.52
VAPA-202ENST00000400000 ZNF250P15622 560 aa11.82□□□□□ -0.52
VAPA-202ENST00000400000 SRD5A1P18405 259 aa11.82□□□□□ -0.52
VAPA-202ENST00000400000 WNT5BQ9H1J7 359 aa11.82□□□□□ -0.52
VAPA-202ENST00000400000 ST6GALNAC2Q9UJ37 374 aa11.82□□□□□ -0.52
VAPA-202ENST00000400000 HMGA2P52926 109 aa11.81□□□□□ -0.52
VAPA-202ENST00000400000 WDFY2Q96P53 400 aa11.81□□□□□ -0.52
VAPA-202ENST00000400000 MARVELD1Q9BSK0 173 aa11.81□□□□□ -0.52
VAPA-202ENST00000400000 TRAF4Q9BUZ4 470 aaPredicted RBP11.81□□□□□ -0.52
VAPA-202ENST00000400000 NPVFQ9HCQ7 196 aa11.81□□□□□ -0.52
VAPA-202ENST00000400000 B4DEV8 164 aa11.81□□□□□ -0.52
VAPA-202ENST00000400000 NPFFO15130 113 aa11.81□□□□□ -0.52
VAPA-202ENST00000400000 TRGV3P03979 118 aa11.81□□□□□ -0.52
VAPA-202ENST00000400000 RELQ04864 619 aaPredicted RBP11.81□□□□□ -0.52
VAPA-202ENST00000400000 FAM106AQ4KMX7 169 aa11.81□□□□□ -0.52
VAPA-202ENST00000400000 TMEM177Q53S58 311 aa11.81□□□□□ -0.52
VAPA-202ENST00000400000 ABHD17AQ96GS6 310 aa11.81□□□□□ -0.52
VAPA-202ENST00000400000 HIST1H4GQ99525 98 aa11.81□□□□□ -0.52
VAPA-202ENST00000400000 SSBP3Q9BWW4 388 aaPredicted RBP11.81□□□□□ -0.52
VAPA-202ENST00000400000 PGA5P0DJD9 388 aa11.81□□□□□ -0.52
VAPA-202ENST00000400000 CARFQ8N187 725 aa11.81□□□□□ -0.52
VAPA-202ENST00000400000 HSPB9Q9BQS6 159 aa11.81□□□□□ -0.52
VAPA-202ENST00000400000 SCNM1Q9BWG6 230 aa11.81□□□□□ -0.52
VAPA-202ENST00000400000 SCN8AQ9UQD0 1980 aa11.81□□□□□ -0.52
VAPA-202ENST00000400000 SHISA5Q8N114 240 aa11.8□□□□□ -0.52
VAPA-202ENST00000400000 A0A1W2PQM1 296 aa11.8□□□□□ -0.52
VAPA-202ENST00000400000 A0A1W2PS18 150 aa11.8□□□□□ -0.52
VAPA-202ENST00000400000 OR4A47Q6IF82 309 aa11.8□□□□□ -0.52
VAPA-202ENST00000400000 NFAM1Q8NET5 270 aaPredicted RBP11.8□□□□□ -0.52
VAPA-202ENST00000400000 TOMM7Q9P0U1 55 aa11.8□□□□□ -0.52
VAPA-202ENST00000400000 QTRT1Q9BXR0 403 aaKnown RBP11.8□□□□□ -0.52
VAPA-202ENST00000400000 IL19Q9UHD0 177 aa11.8□□□□□ -0.52
VAPA-202ENST00000400000 HS3ST3B1Q9Y662 390 aa11.8□□□□□ -0.52
VAPA-202ENST00000400000 TMEM218A2RU14 115 aa11.8□□□□□ -0.52
VAPA-202ENST00000400000 NPIPB6E9PJ23 425 aa11.8□□□□□ -0.52
VAPA-202ENST00000400000 RECKO95980 971 aa11.8□□□□□ -0.52
VAPA-202ENST00000400000 MFAP4P55083 255 aa11.8□□□□□ -0.52
VAPA-202ENST00000400000 SUMO2P61956 95 aaKnown RBP11.8□□□□□ -0.52
VAPA-202ENST00000400000 LHFPL4Q7Z7J7 247 aa11.8□□□□□ -0.52
VAPA-202ENST00000400000 CALHM1Q8IU99 346 aa11.8□□□□□ -0.52
VAPA-202ENST00000400000 C1orf174Q8IYL3 243 aa11.8□□□□□ -0.52
VAPA-202ENST00000400000 C18orf15Q96N68 181 aa11.8□□□□□ -0.52
VAPA-202ENST00000400000 OPN4Q9UHM6 478 aa11.8□□□□□ -0.52
VAPA-202ENST00000400000 MGST3O14880 152 aa11.8□□□□□ -0.52
VAPA-202ENST00000400000 LGALS3P17931 250 aaKnown RBP11.8□□□□□ -0.52
VAPA-202ENST00000400000 MMP16P51512 607 aa11.8□□□□□ -0.52
VAPA-202ENST00000400000 FGF12P61328 243 aa11.8□□□□□ -0.52
VAPA-202ENST00000400000 ST6GALNAC3Q8NDV1 305 aa11.8□□□□□ -0.52
VAPA-202ENST00000400000 CTXND1A0A1B0GTU2 59 aa11.8□□□□□ -0.52
VAPA-202ENST00000400000 AHRRA9YTQ3 701 aa11.8□□□□□ -0.52
VAPA-202ENST00000400000 PITX3O75364 302 aa11.8□□□□□ -0.52
VAPA-202ENST00000400000 NGFRP08138 427 aa11.8□□□□□ -0.52
VAPA-202ENST00000400000 RFPL3SP0C7P2 107 aa11.8□□□□□ -0.52
VAPA-202ENST00000400000 CD99P14209 185 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms