RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 SRSF8Q9BRL6 282 aaKnown RBP8.34□□□□□ -1.08
SMAD9-203ENST00000399275 TRBV5-7A0A0A0MS05 114 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 PLPP3O14495 311 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 TIMM8AO60220 97 aaPredicted RBP8.33□□□□□ -1.08
SMAD9-203ENST00000399275 MGPP08493 103 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 CLDN15P56746 228 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 C2orf83Q53S99 150 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 MPV17L2Q567V2 206 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 C1orf122Q6ZSJ8 110 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 OR4C3Q8NH37 302 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 NABP2Q9BQ15 211 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 ABHD14AQ9BUJ0 271 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 HEXA-AS1Q9H8Q6 139 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 A0A0G2JK05 382 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 A0A1B0GX78 115 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 CD5LO43866 347 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 GRPP07492 148 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 ORM2P19652 201 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 HBBP68871 147 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 FXYD3Q14802 87 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 MORN3Q6PF18 240 aaPredicted RBP8.33□□□□□ -1.08
SMAD9-203ENST00000399275 SNRNP40Q96DI7 357 aaKnown RBP8.33□□□□□ -1.08
SMAD9-203ENST00000399275 SPANXDQ9BXN6 97 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 ZNF766Q5HY98 468 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 VN1R4Q7Z5H5 301 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 PRELID3AQ96N28 172 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 RTL8AQ9BWD3 113 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 A0A1W2PPC1 479 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 A0A1W2PQM1 296 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 NKX2-6A6NCS4 301 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 TMEM8BA6NDV4 472 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 TSPAN2O60636 221 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 RBP4P02753 201 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 SPINK9Q5DT21 86 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 OR10J3Q5JRS4 329 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 RFLNBQ8N5W9 214 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 SCCPDHQ8NBX0 429 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 RND1Q92730 232 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 EPDR1Q9UM22 224 aa8.33□□□□□ -1.08
SMAD9-203ENST00000399275 FCN3O75636 299 aa8.32□□□□□ -1.08
SMAD9-203ENST00000399275 PRSS53Q2L4Q9 553 aa8.32□□□□□ -1.08
SMAD9-203ENST00000399275 ZNF585BQ52M93 769 aa8.32□□□□□ -1.08
SMAD9-203ENST00000399275 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.32□□□□□ -1.08
SMAD9-203ENST00000399275 OR10AC1Q8NH08 325 aa8.32□□□□□ -1.08
SMAD9-203ENST00000399275 TMEM250H0YL14 139 aa8.32□□□□□ -1.08
SMAD9-203ENST00000399275 EML2O95834 649 aa8.32□□□□□ -1.08
SMAD9-203ENST00000399275 CTLA4P16410 223 aa8.32□□□□□ -1.08
SMAD9-203ENST00000399275 TM4SF4P48230 202 aa8.32□□□□□ -1.08
SMAD9-203ENST00000399275 RBPJQ06330 500 aa8.32□□□□□ -1.08
SMAD9-203ENST00000399275 ABHD17BQ5VST6 288 aa8.32□□□□□ -1.08
SMAD9-203ENST00000399275 TCF24Q7RTU0 167 aa8.32□□□□□ -1.08
SMAD9-203ENST00000399275 WFDC6Q9BQY6 131 aa8.32□□□□□ -1.08
SMAD9-203ENST00000399275 TAAR3PQ9P1P4 343 aa8.32□□□□□ -1.08
SMAD9-203ENST00000399275 ZNF391Q9UJN7 358 aa8.32□□□□□ -1.08
SMAD9-203ENST00000399275 A0A1W2PPV9 198 aa8.32□□□□□ -1.08
SMAD9-203ENST00000399275 PIN1P1O15428 100 aa8.32□□□□□ -1.08
SMAD9-203ENST00000399275 RAMP1O60894 148 aa8.32□□□□□ -1.08
SMAD9-203ENST00000399275 MPDU1O75352 247 aa8.32□□□□□ -1.08
SMAD9-203ENST00000399275 LSM6P62312 80 aaKnown RBP8.32□□□□□ -1.08
SMAD9-203ENST00000399275 PLAURQ03405 335 aa8.32□□□□□ -1.08
SMAD9-203ENST00000399275 PSG3Q16557 428 aa8.32□□□□□ -1.08
SMAD9-203ENST00000399275 TMEM215Q68D42 235 aa8.32□□□□□ -1.08
SMAD9-203ENST00000399275 PQLC2Q6ZP29 291 aa8.32□□□□□ -1.08
SMAD9-203ENST00000399275 PGLYRP4Q96LB8 373 aa8.32□□□□□ -1.08
SMAD9-203ENST00000399275 V9GYY9 64 aa8.32□□□□□ -1.08
SMAD9-203ENST00000399275 VSIG8P0DPA2 414 aa8.32□□□□□ -1.08
SMAD9-203ENST00000399275 KIR3DL2P43630 455 aa8.32□□□□□ -1.08
SMAD9-203ENST00000399275 CAPZBP47756 277 aa8.32□□□□□ -1.08
SMAD9-203ENST00000399275 RPS4XP62701 263 aaKnown RBP8.32□□□□□ -1.08
SMAD9-203ENST00000399275 TMEM252Q8N6L7 170 aa8.32□□□□□ -1.08
SMAD9-203ENST00000399275 NXT2Q9NPJ8 142 aaKnown RBP8.32□□□□□ -1.08
SMAD9-203ENST00000399275 PLSCR2Q9NRY7 297 aa8.32□□□□□ -1.08
SMAD9-203ENST00000399275 HDGFL3Q9Y3E1 203 aa8.32□□□□□ -1.08
SMAD9-203ENST00000399275 HCFC2Q9Y5Z7 792 aa8.32□□□□□ -1.08
SMAD9-203ENST00000399275 K7EP13 123 aa8.31□□□□□ -1.08
SMAD9-203ENST00000399275 PNLIPP16233 465 aa8.31□□□□□ -1.08
SMAD9-203ENST00000399275 FOXA3P55318 350 aaPredicted RBP8.31□□□□□ -1.08
SMAD9-203ENST00000399275 FBXL14Q8N1E6 418 aa8.31□□□□□ -1.08
SMAD9-203ENST00000399275 WFDC12Q8WWY7 111 aa8.31□□□□□ -1.08
SMAD9-203ENST00000399275 ZNF707Q96C28 371 aaPredicted RBP8.31□□□□□ -1.08
SMAD9-203ENST00000399275 C10orf35Q96D05 121 aa8.31□□□□□ -1.08
SMAD9-203ENST00000399275 GPR132Q9UNW8 380 aa8.31□□□□□ -1.08
SMAD9-203ENST00000399275 FOLR3P41439 243 aa8.31□□□□□ -1.08
SMAD9-203ENST00000399275 AQP3Q92482 292 aa8.31□□□□□ -1.08
SMAD9-203ENST00000399275 ZNF385AQ96PM9 386 aaKnown RBP8.31□□□□□ -1.08
SMAD9-203ENST00000399275 TRAV12-3A0A0B4J271 114 aa8.31□□□□□ -1.08
SMAD9-203ENST00000399275 SOCS1O15524 211 aa8.31□□□□□ -1.08
SMAD9-203ENST00000399275 MLNRO43193 412 aa8.31□□□□□ -1.08
SMAD9-203ENST00000399275 SPRY1O43609 319 aaPredicted RBP8.31□□□□□ -1.08
SMAD9-203ENST00000399275 CT62P0C5K7 136 aa8.31□□□□□ -1.08
SMAD9-203ENST00000399275 SSR4P51571 173 aa8.31□□□□□ -1.08
SMAD9-203ENST00000399275 TMEM258P61165 79 aa8.31□□□□□ -1.08
SMAD9-203ENST00000399275 S100A7L2Q5SY68 101 aa8.31□□□□□ -1.08
SMAD9-203ENST00000399275 DUX4L9Q6RFH8 374 aaPredicted RBP8.31□□□□□ -1.08
SMAD9-203ENST00000399275 OR9G4Q8NGQ1 327 aa8.31□□□□□ -1.08
SMAD9-203ENST00000399275 H1FXQ92522 213 aaKnown RBP8.31□□□□□ -1.08
SMAD9-203ENST00000399275 GRAMD2BQ96HH9 432 aa8.31□□□□□ -1.08
SMAD9-203ENST00000399275 MS4A6AQ9H2W1 248 aa8.31□□□□□ -1.08
SMAD9-203ENST00000399275 PGPEP1Q9NXJ5 209 aa8.31□□□□□ -1.08
SMAD9-203ENST00000399275 MRPS18BQ9Y676 258 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms