RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 HIST1H2BAQ96A08 127 aa12.62□□□□□ -0.39
COL25A1-201ENST00000399126 SUCNR1Q9BXA5 334 aa12.62□□□□□ -0.39
COL25A1-201ENST00000399126 GSKIPQ9P0R6 139 aa12.62□□□□□ -0.39
COL25A1-201ENST00000399126 PPP1R3CQ9UQK1 317 aa12.62□□□□□ -0.39
COL25A1-201ENST00000399126 OR2W1Q9Y3N9 320 aa12.62□□□□□ -0.39
COL25A1-201ENST00000399126 EPG5Q9HCE0 2579 aa12.62□□□□□ -0.39
COL25A1-201ENST00000399126 MPPED1O15442 326 aa12.62□□□□□ -0.39
COL25A1-201ENST00000399126 HSPA12AO43301 675 aa12.62□□□□□ -0.39
COL25A1-201ENST00000399126 HNF4GQ14541 408 aa12.62□□□□□ -0.39
COL25A1-201ENST00000399126 CLINT1Q14677 625 aa12.62□□□□□ -0.39
COL25A1-201ENST00000399126 GNMTQ14749 295 aa12.62□□□□□ -0.39
COL25A1-201ENST00000399126 SLC35E4Q6ICL7 350 aa12.62□□□□□ -0.39
COL25A1-201ENST00000399126 C11orf87Q6NUJ2 197 aa12.62□□□□□ -0.39
COL25A1-201ENST00000399126 FAM90A1Q86YD7 464 aa12.62□□□□□ -0.39
COL25A1-201ENST00000399126 RFESDQ8TAC1 157 aa12.62□□□□□ -0.39
COL25A1-201ENST00000399126 MSI2Q96DH6 328 aaKnown RBP12.62□□□□□ -0.39
COL25A1-201ENST00000399126 GALNT14Q96FL9 552 aa12.62□□□□□ -0.39
COL25A1-201ENST00000399126 NGBQ9NPG2 151 aa12.62□□□□□ -0.39
COL25A1-201ENST00000399126 COMMD9Q9P000 198 aa12.62□□□□□ -0.39
COL25A1-201ENST00000399126 RNF7Q9UBF6 113 aa12.62□□□□□ -0.39
COL25A1-201ENST00000399126 H0YIZ8 118 aa12.61□□□□□ -0.39
COL25A1-201ENST00000399126 MT-ND4LP03901 98 aa12.61□□□□□ -0.39
COL25A1-201ENST00000399126 NFYBP25208 207 aa12.61□□□□□ -0.39
COL25A1-201ENST00000399126 GAGE1Q13065 139 aa12.61□□□□□ -0.39
COL25A1-201ENST00000399126 ZNF546Q86UE3 836 aa12.61□□□□□ -0.39
COL25A1-201ENST00000399126 OR52L2PQ8NGH6 319 aa12.61□□□□□ -0.39
COL25A1-201ENST00000399126 ASB13Q8WXK3 278 aa12.61□□□□□ -0.39
COL25A1-201ENST00000399126 C14orf79Q96F83 325 aa12.61□□□□□ -0.39
COL25A1-201ENST00000399126 SEC11CQ9BY50 192 aa12.61□□□□□ -0.39
COL25A1-201ENST00000399126 TMEM238C9JI98 176 aa12.61□□□□□ -0.39
COL25A1-201ENST00000399126 IGLV2-14P01704 120 aa12.61□□□□□ -0.39
COL25A1-201ENST00000399126 HBZP02008 142 aa12.61□□□□□ -0.39
COL25A1-201ENST00000399126 GGNBP1Q5YKI7 109 aa12.61□□□□□ -0.39
COL25A1-201ENST00000399126 FGFRL1Q8N441 504 aa12.61□□□□□ -0.39
COL25A1-201ENST00000399126 RALYQ9UKM9 306 aaKnown RBP12.61□□□□□ -0.39
COL25A1-201ENST00000399126 IGHV3-43A0A0B4J1X8 118 aa12.6□□□□□ -0.39
COL25A1-201ENST00000399126 C3orf85A0A1B0GTC6 90 aa12.6□□□□□ -0.39
COL25A1-201ENST00000399126 DLEU1O43261 78 aa12.6□□□□□ -0.39
COL25A1-201ENST00000399126 TNFRSF6BO95407 300 aa12.6□□□□□ -0.39
COL25A1-201ENST00000399126 IGHV3-43DP0DP04 118 aa12.6□□□□□ -0.39
COL25A1-201ENST00000399126 OR5T1Q8NG75 326 aa12.6□□□□□ -0.39
COL25A1-201ENST00000399126 NMES1Q9C002 83 aa12.6□□□□□ -0.39
COL25A1-201ENST00000399126 AKAP6Q13023 2319 aa12.6□□□□□ -0.39
COL25A1-201ENST00000399126 CD3EP07766 207 aa12.6□□□□□ -0.39
COL25A1-201ENST00000399126 PSMB6P28072 239 aa12.6□□□□□ -0.39
COL25A1-201ENST00000399126 PLA2G5P39877 138 aa12.6□□□□□ -0.39
COL25A1-201ENST00000399126 LTC4SQ16873 150 aa12.6□□□□□ -0.39
COL25A1-201ENST00000399126 IAH1Q2TAA2 248 aaPredicted RBP12.6□□□□□ -0.39
COL25A1-201ENST00000399126 LIAT1Q6ZQX7 453 aa12.6□□□□□ -0.39
COL25A1-201ENST00000399126 SSX8Q7RTT4 187 aa12.6□□□□□ -0.39
COL25A1-201ENST00000399126 FOXRED2Q8IWF2 684 aa12.6□□□□□ -0.39
COL25A1-201ENST00000399126 STOML3Q8TAV4 291 aa12.6□□□□□ -0.39
COL25A1-201ENST00000399126 TANC2Q9HCD6 1990 aa12.6□□□□□ -0.39
COL25A1-201ENST00000399126 NPIPB11E5RHQ5 1161 aa12.59□□□□□ -0.39
COL25A1-201ENST00000399126 F12P00748 615 aaPredicted RBP12.59□□□□□ -0.39
COL25A1-201ENST00000399126 GYPAP02724 150 aa12.59□□□□□ -0.39
COL25A1-201ENST00000399126 CLEC3BP05452 202 aa12.59□□□□□ -0.39
COL25A1-201ENST00000399126 OR8U9P0C7N5 309 aa12.59□□□□□ -0.39
COL25A1-201ENST00000399126 TFF3Q07654 80 aa12.59□□□□□ -0.39
COL25A1-201ENST00000399126 RAB32Q13637 225 aa12.59□□□□□ -0.39
COL25A1-201ENST00000399126 CCDC71LQ8N9Z2 235 aa12.59□□□□□ -0.39
COL25A1-201ENST00000399126 OR10V1Q8NGI7 309 aa12.59□□□□□ -0.39
COL25A1-201ENST00000399126 OR8U1Q8NH10 309 aa12.59□□□□□ -0.39
COL25A1-201ENST00000399126 RNF126Q9BV68 326 aa12.59□□□□□ -0.39
COL25A1-201ENST00000399126 KCNIP1Q9NZI2 227 aa12.59□□□□□ -0.39
COL25A1-201ENST00000399126 OR5AC2Q9NZP5 309 aa12.59□□□□□ -0.39
COL25A1-201ENST00000399126 YLPM1P49750 1951 aaKnown RBP12.59□□□□□ -0.39
COL25A1-201ENST00000399126 RNF222A6NCQ9 220 aa12.59□□□□□ -0.39
COL25A1-201ENST00000399126 TGFAP01135 160 aa12.59□□□□□ -0.39
COL25A1-201ENST00000399126 GAMTQ14353 236 aa12.59□□□□□ -0.39
COL25A1-201ENST00000399126 MST1LQ2TV78 715 aa12.59□□□□□ -0.39
COL25A1-201ENST00000399126 FAM216BQ8N7L0 139 aa12.59□□□□□ -0.39
COL25A1-201ENST00000399126 OR51H1Q8NH63 302 aa12.59□□□□□ -0.39
COL25A1-201ENST00000399126 C2orf50Q96LR7 162 aa12.59□□□□□ -0.39
COL25A1-201ENST00000399126 CCL13Q99616 98 aa12.59□□□□□ -0.39
COL25A1-201ENST00000399126 PRO1933Q9H354 126 aa12.59□□□□□ -0.39
COL25A1-201ENST00000399126 KCNJ16Q9NPI9 418 aa12.59□□□□□ -0.39
COL25A1-201ENST00000399126 GAR1Q9NY12 217 aaKnown RBP12.59□□□□□ -0.39
COL25A1-201ENST00000399126 TNFSF18Q9UNG2 199 aa12.59□□□□□ -0.39
COL25A1-201ENST00000399126 MYO18BQ8IUG5 2567 aa12.58□□□□□ -0.39
COL25A1-201ENST00000399126 OOEPA6NGQ2 149 aa12.58□□□□□ -0.4
COL25A1-201ENST00000399126 PGLYRP1O75594 196 aaPredicted RBP12.58□□□□□ -0.4
COL25A1-201ENST00000399126 HOXA5P20719 270 aa12.58□□□□□ -0.4
COL25A1-201ENST00000399126 GNLYP22749 145 aa12.58□□□□□ -0.4
COL25A1-201ENST00000399126 IL2RGP31785 369 aa12.58□□□□□ -0.4
COL25A1-201ENST00000399126 PPP1CCP36873 323 aaKnown RBP12.58□□□□□ -0.4
COL25A1-201ENST00000399126 AKR1C2P52895 323 aa12.58□□□□□ -0.4
COL25A1-201ENST00000399126 EDDM3BP56851 147 aa12.58□□□□□ -0.4
COL25A1-201ENST00000399126 AKR1C1Q04828 323 aa12.58□□□□□ -0.4
COL25A1-201ENST00000399126 IL15RAQ13261 267 aa12.58□□□□□ -0.4
COL25A1-201ENST00000399126 TMEM268Q5VZI3 342 aa12.58□□□□□ -0.4
COL25A1-201ENST00000399126 SLC35G3Q8N808 338 aa12.58□□□□□ -0.4
COL25A1-201ENST00000399126 UBAC2Q8NBM4 344 aa12.58□□□□□ -0.4
COL25A1-201ENST00000399126 BEND2Q8NDZ0 799 aa12.58□□□□□ -0.4
COL25A1-201ENST00000399126 Q8TCH9 128 aa12.58□□□□□ -0.4
COL25A1-201ENST00000399126 FAM222BQ8WU58 562 aa12.58□□□□□ -0.4
COL25A1-201ENST00000399126 C18orf12Q96KH6 178 aa12.58□□□□□ -0.4
COL25A1-201ENST00000399126 CNTNAP3BQ96NU0 1288 aa12.58□□□□□ -0.4
COL25A1-201ENST00000399126 ATG101Q9BSB4 218 aa12.58□□□□□ -0.4
COL25A1-201ENST00000399126 CHODLQ9H9P2 273 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms