RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 TMEM56-RWDD3S4R434 201 aa7.19□□□□□ -1.26
SPTLC3-201ENST00000399002 ZNF25P17030 456 aaPredicted RBP7.19□□□□□ -1.26
SPTLC3-201ENST00000399002 LRRC75AQ8NAA5 344 aa7.19□□□□□ -1.26
SPTLC3-201ENST00000399002 OR1N2Q8NGR9 330 aa7.19□□□□□ -1.26
SPTLC3-201ENST00000399002 OR5P3Q8WZ94 311 aa7.19□□□□□ -1.26
SPTLC3-201ENST00000399002 HIST1H2BAQ96A08 127 aa7.19□□□□□ -1.26
SPTLC3-201ENST00000399002 KCNE5Q9UJ90 142 aa7.19□□□□□ -1.26
SPTLC3-201ENST00000399002 ARID2Q68CP9 1835 aa7.19□□□□□ -1.26
SPTLC3-201ENST00000399002 GREM1O60565 184 aa7.19□□□□□ -1.26
SPTLC3-201ENST00000399002 ADRA2AP08913 450 aa7.19□□□□□ -1.26
SPTLC3-201ENST00000399002 CLEC2AQ6UVW9 174 aa7.19□□□□□ -1.26
SPTLC3-201ENST00000399002 SMIM12Q96EX1 92 aa7.19□□□□□ -1.26
SPTLC3-201ENST00000399002 WFIKKN1Q96NZ8 548 aa7.19□□□□□ -1.26
SPTLC3-201ENST00000399002 QTRT1Q9BXR0 403 aaKnown RBP7.19□□□□□ -1.26
SPTLC3-201ENST00000399002 TNS1Q9HBL0 1735 aaKnown RBP7.19□□□□□ -1.26
SPTLC3-201ENST00000399002 OR4C46A6NHA9 309 aa7.19□□□□□ -1.26
SPTLC3-201ENST00000399002 RPL24P83731 157 aaKnown RBP7.19□□□□□ -1.26
SPTLC3-201ENST00000399002 ATP5G2Q06055 141 aa7.19□□□□□ -1.26
SPTLC3-201ENST00000399002 OR9G1Q8NH87 305 aa7.19□□□□□ -1.26
SPTLC3-201ENST00000399002 PLSCR2Q9NRY7 297 aa7.19□□□□□ -1.26
SPTLC3-201ENST00000399002 CENPVL1A0A0U1RR11 272 aa7.19□□□□□ -1.26
SPTLC3-201ENST00000399002 ZNF98A6NK75 572 aa7.19□□□□□ -1.26
SPTLC3-201ENST00000399002 IL11P20809 199 aa7.19□□□□□ -1.26
SPTLC3-201ENST00000399002 CDX1P47902 265 aaPredicted RBP7.19□□□□□ -1.26
SPTLC3-201ENST00000399002 OR10S1Q8NGN2 331 aa7.19□□□□□ -1.26
SPTLC3-201ENST00000399002 OR10AG1Q8NH19 301 aa7.19□□□□□ -1.26
SPTLC3-201ENST00000399002 CARHSP1Q9Y2V2 147 aaKnown RBP7.19□□□□□ -1.26
SPTLC3-201ENST00000399002 PARP14Q460N5 1801 aa7.19□□□□□ -1.26
SPTLC3-201ENST00000399002 TDRD15B5MCY1 1934 aaKnown RBP7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 ZNFX1Q9P2E3 1918 aaKnown RBP7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 ODAMA1E959 279 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 NPIPB9F8W1W9 429 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 TMEM250H0YL14 139 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 NDUFB4O95168 129 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 LCN2P80188 198 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 MGAT2Q10469 447 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 DNLZQ5SXM8 178 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 FGFRL1Q8N441 504 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 OR4C13Q8NGP0 309 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 C5orf66Q9H5L9 145 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 A0A087WWC5 75 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 FAM157AC9JC47 383 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 CCL21O00585 134 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 GCM2O75603 506 aaPredicted RBP7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 SCTP09683 121 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 CKS2P33552 79 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 MFAP2P55001 183 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 CD300CQ08708 224 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 TCF24Q7RTU0 167 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 RAX2Q96IS3 184 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 MSL2Q9HCI7 577 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 TNFRSF19Q9NS68 423 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 GFRA1P56159 465 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 CIRBPQ14011 172 aaKnown RBP7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 HERPUD1Q15011 391 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 FAM106AQ4KMX7 169 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 SAPCD1Q5SSQ6 148 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 OPN3Q9H1Y3 402 aaPredicted RBP7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 VCX2Q9H322 139 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 PILRBQ9UKJ0 227 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 GREB1LQ9C091 1923 aaPredicted RBP7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 LGALS3P17931 250 aaKnown RBP7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 ANOS1P23352 680 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 IFITM3Q01628 133 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 TMEM136Q6ZRR5 245 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 DNASE2BQ8WZ79 361 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 FMC1Q96HJ9 113 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 OR4C12Q96R67 309 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 CCL13Q99616 98 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 IGKV1D-42A0A075B6H8 117 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 MNX1P50219 401 aaPredicted RBP7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 OR4A47Q6IF82 309 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 SFRP2Q96HF1 295 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 HSPB9Q9BQS6 159 aa7.18□□□□□ -1.26
SPTLC3-201ENST00000399002 COL11A1P12107 1806 aaPredicted RBP7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 TRBV23-1A0A0A0MS06 115 aa7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 Q6AWC8 147 aa7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 SAP25Q8TEE9 199 aa7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 MIEN1Q9BRT3 115 aa7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 WNT5BQ9H1J7 359 aa7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 H3BVH4 76 aa7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 KLF4O43474 513 aa7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 LEPROTL1O95214 131 aa7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 HLA-DRB1P01911 266 aa7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 AGAP20933 346 aa7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 CA7P43166 264 aa7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 NUBP1P53384 320 aa7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 TM4SF20Q53R12 229 aa7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 SLC25A53Q5H9E4 307 aa7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 SLC25A34Q6PIV7 304 aa7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 OR52M1Q8NGK5 317 aa7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 ALKBH7Q9BT30 221 aaPredicted RBP7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 ZNF236Q9UL36 1845 aa7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 ZNF883P0CG24 379 aa7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 PCOLCEQ15113 449 aa7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 ADIPOQQ15848 244 aa7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 GUCA2BQ16661 112 aa7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 ZNF841Q6ZN19 808 aa7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 DNM1P46Q6ZS02 220 aa7.17□□□□□ -1.26
SPTLC3-201ENST00000399002 OR51G1Q8NGK1 321 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms